Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901376

Identifier: 159901376

GI number: 159901376

Start: 6198425

End: 6199300

Strand: Direct

Name: 159901376

Synonym: Haur_4865

Alternate gene names: NA

Gene position: 6198425-6199300 (Clockwise)

Preceding gene: 159901375

Following gene: 159901380

Centisome position: 97.67

GC content: 46.35

Gene sequence:

>876_bases
ATGACAGTTATGACAGAACAGGTGCAGCGACGCTCATTATTCTGGCCCTGTTTGCTGATAGGCCTTGGGGTGCTCGGGGC
ACTATCGGCAATCAATCTCTTTGATGCCAGTTTGTTTGATCTACTGGATGAGTTCTGGCCAGTCTTGTTGATCGGGGCTG
GCCTCGATCTTTTGGTGGCGCGGAATCGGCCACGCTTCGGGCTGGGTTTAGCATTGGTAGTTTTGAGCGTGTTGGGTTTG
TATGGCCTTACCTATACTGAACCCAACTATGAAATCTATAGTGAGGCCTTAGCAGCGCCCCAAATGGCCCGCGTTGTTGT
CAATGAACGTGGCAGCACGCTTGAAATCAAGCCTGAAATCCTCGATGGTCAAACCTCGATTGCTGGGGTTGTGCAAGCAA
CCAATATTGGCTTGCGTGAACTGAATCCAGATAGCGAACATATCAGCATTGTTTTGGGCCAAGATGAGCCATTTGGTGGC
AATAAAGGCCCGCAAACAATTTTGGTTTCCATGAATCATCCAGTTGATTTCGATTGGGATTTGCGTGATGTAACGTTAAA
TGCTGATTTATCAACATTGCAAATTGGCAGAGTTGATGCTGAATTAGATGCAGGCTCGGCGGTTATTAACTTGGCTGAGC
GTGGCGAATATCATTTCAATATCGATGCCACGACCTTGGAATTAAATCTACCAATTAATATTCCAGTGCGAATTCAGCGC
GATGATAATGCAACAGCCTTCAATCTCAATCGCGATTTGAATATTCAGCAAGTTGATGATGATCTCTATCGAAGCCCTGA
TTGGGAAGCTACGCCAGAGGAGTATCGCTTAGATATTTATCTCTCAGGATCAGCCTCGAGCATCACGATCAAGTAA

Upstream 100 bases:

>100_bases
TAAATTTGGTGGGGCAGCAGAATTTATTACGCCATTGTTGTTGATTGGCTTAGGGATCATGTTGTTTCGGCGGCGTGGCT
AGCAGCGGGAGAAGTTGATT

Downstream 100 bases:

>100_bases
TCATTGCCTTGCCAACCGAACCAATCCCGCAGCCATGAACTCCATGGCTGCGGGATTTTGAGTTTAAGCTTGGGCTAGTT
CAACGTATTCTTGCTTGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTVMTEQVQRRSLFWPCLLIGLGVLGALSAINLFDASLFDLLDEFWPVLLIGAGLDLLVARNRPRFGLGLALVVLSVLGL
YGLTYTEPNYEIYSEALAAPQMARVVVNERGSTLEIKPEILDGQTSIAGVVQATNIGLRELNPDSEHISIVLGQDEPFGG
NKGPQTILVSMNHPVDFDWDLRDVTLNADLSTLQIGRVDAELDAGSAVINLAERGEYHFNIDATTLELNLPINIPVRIQR
DDNATAFNLNRDLNIQQVDDDLYRSPDWEATPEEYRLDIYLSGSASSITIK

Sequences:

>Translated_291_residues
MTVMTEQVQRRSLFWPCLLIGLGVLGALSAINLFDASLFDLLDEFWPVLLIGAGLDLLVARNRPRFGLGLALVVLSVLGL
YGLTYTEPNYEIYSEALAAPQMARVVVNERGSTLEIKPEILDGQTSIAGVVQATNIGLRELNPDSEHISIVLGQDEPFGG
NKGPQTILVSMNHPVDFDWDLRDVTLNADLSTLQIGRVDAELDAGSAVINLAERGEYHFNIDATTLELNLPINIPVRIQR
DDNATAFNLNRDLNIQQVDDDLYRSPDWEATPEEYRLDIYLSGSASSITIK
>Mature_290_residues
TVMTEQVQRRSLFWPCLLIGLGVLGALSAINLFDASLFDLLDEFWPVLLIGAGLDLLVARNRPRFGLGLALVVLSVLGLY
GLTYTEPNYEIYSEALAAPQMARVVVNERGSTLEIKPEILDGQTSIAGVVQATNIGLRELNPDSEHISIVLGQDEPFGGN
KGPQTILVSMNHPVDFDWDLRDVTLNADLSTLQIGRVDAELDAGSAVINLAERGEYHFNIDATTLELNLPINIPVRIQRD
DNATAFNLNRDLNIQQVDDDLYRSPDWEATPEEYRLDIYLSGSASSITIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32079; Mature: 31948

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVMTEQVQRRSLFWPCLLIGLGVLGALSAINLFDASLFDLLDEFWPVLLIGAGLDLLVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEE
RNRPRFGLGLALVVLSVLGLYGLTYTEPNYEIYSEALAAPQMARVVVNERGSTLEIKPEI
CCCCCCCHHHHHHHHHHHHHHCCEEECCCHHHHHHHHCCHHHHHHHCCCCCCEEEECCCE
LDGQTSIAGVVQATNIGLRELNPDSEHISIVLGQDEPFGGNKGPQTILVSMNHPVDFDWD
ECCCCHHEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCC
LRDVTLNADLSTLQIGRVDAELDAGSAVINLAERGEYHFNIDATTLELNLPINIPVRIQR
CEEEEECCCCCEEEEECCCCCCCCCHHEEEHHHCCCEEEEEEEEEEEEECCEECEEEEEE
DDNATAFNLNRDLNIQQVDDDLYRSPDWEATPEEYRLDIYLSGSASSITIK
CCCCEEEECCCCCCCEECCHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEC
>Mature Secondary Structure 
TVMTEQVQRRSLFWPCLLIGLGVLGALSAINLFDASLFDLLDEFWPVLLIGAGLDLLVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEE
RNRPRFGLGLALVVLSVLGLYGLTYTEPNYEIYSEALAAPQMARVVVNERGSTLEIKPEI
CCCCCCCHHHHHHHHHHHHHHCCEEECCCHHHHHHHHCCHHHHHHHCCCCCCEEEECCCE
LDGQTSIAGVVQATNIGLRELNPDSEHISIVLGQDEPFGGNKGPQTILVSMNHPVDFDWD
ECCCCHHEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCC
LRDVTLNADLSTLQIGRVDAELDAGSAVINLAERGEYHFNIDATTLELNLPINIPVRIQR
CEEEEECCCCCEEEEECCCCCCCCCHHEEEHHHCCCEEEEEEEEEEEEECCEECEEEEEE
DDNATAFNLNRDLNIQQVDDDLYRSPDWEATPEEYRLDIYLSGSASSITIK
CCCCEEEECCCCCCCEECCHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA