| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159901271
Identifier: 159901271
GI number: 159901271
Start: 6065094
End: 6065987
Strand: Reverse
Name: 159901271
Synonym: Haur_4759
Alternate gene names: NA
Gene position: 6065987-6065094 (Counterclockwise)
Preceding gene: 159901272
Following gene: 159901270
Centisome position: 95.58
GC content: 49.78
Gene sequence:
>894_bases ATGCAGCGCTGGTGGCGGGTTTTCTATGGTGTAATTATTGTTGGCTTAGTGGGCTGTGGTGCAGCTACGCCAACTGCAAC TCCGGTGGCTAAAAGTCGCGTTCAGGCAGTTTTGGCAGCATCTAATTTAGTAGTTGGCCCAAATCGCTTGCCAATCGGCT TGATCGTCGATGGCTCACCAATCAATGACCCCAATGTGCAAGTCAAATTGCGCTTGTATTATCTTGATGGAACCGATGCT GAGAAAACCCAAGTGGCTGGTGAAGGCAGTGCCGATTATTTTGGCCAAGGCTTGCCCGCTGGCATCTATGTGACCTACCC TGATTTTAAAAAGGCTGGCGATTGGGGCGTTGAAGTTGAGGCAACTTTGCCGGGCAAAGAGCCAACCGTCAGCACCTTGC GGCTCTCGGTTTTGGCTCAAGATCCTACGCCAGCGATTGGCAGCAAAGCGATTGCCGTCGATACGCCAACCGTCAAAACT GCGCCTGATCTAAGCCAAATCAGCTCTGATCCAAATCCCAATCCGGCCTTGTATCAATTGAGCATTGCCGATGCGATTAC GAGCGGCAAGCCTACCGCAATTTTATTTGGCACGCCAGGCTTTTGCAAAACCGCTACCTGTGGCCCGAGCGTTACAGTTT TGGGCAATTTACAGAAAACCTATGGCGAAAAGATGAATTTTATCCATGTGGAAGTTTATAAGTTCCCATTTAGCGAATCA GTCCAAGCTAATCCACCATTATTAGTGCCAGCTATGGCCGAATGGCGCTTGCAGAGCGAGCCATGGTTGTTCTTGCTCGG CAAAGATGGCACGATTGTCAATAAATATGAGGGTGGCATTACGACCGAAGAGCTTGGCCCGATGATCGATACGATCTTAG CCCAAGGGATTTAG
Upstream 100 bases:
>100_bases ACCGATAGGCGTGAATGAAATTTGTGCTAGAGTGAATAGCGTCAGGGTTTCGGCGCTGGCACATCGTTAAACAGATATCT ACTGTATGAGGAGCAATCGT
Downstream 100 bases:
>100_bases CCCAAATCCGTGCAGCAGTAGTGCAACCGCGTTGCTGCTGCAACCTTGTTGATCCCCCAACGTAAACAATCACGATGCTG CTGAGTAATGAGAGAACATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MQRWWRVFYGVIIVGLVGCGAATPTATPVAKSRVQAVLAASNLVVGPNRLPIGLIVDGSPINDPNVQVKLRLYYLDGTDA EKTQVAGEGSADYFGQGLPAGIYVTYPDFKKAGDWGVEVEATLPGKEPTVSTLRLSVLAQDPTPAIGSKAIAVDTPTVKT APDLSQISSDPNPNPALYQLSIADAITSGKPTAILFGTPGFCKTATCGPSVTVLGNLQKTYGEKMNFIHVEVYKFPFSES VQANPPLLVPAMAEWRLQSEPWLFLLGKDGTIVNKYEGGITTEELGPMIDTILAQGI
Sequences:
>Translated_297_residues MQRWWRVFYGVIIVGLVGCGAATPTATPVAKSRVQAVLAASNLVVGPNRLPIGLIVDGSPINDPNVQVKLRLYYLDGTDA EKTQVAGEGSADYFGQGLPAGIYVTYPDFKKAGDWGVEVEATLPGKEPTVSTLRLSVLAQDPTPAIGSKAIAVDTPTVKT APDLSQISSDPNPNPALYQLSIADAITSGKPTAILFGTPGFCKTATCGPSVTVLGNLQKTYGEKMNFIHVEVYKFPFSES VQANPPLLVPAMAEWRLQSEPWLFLLGKDGTIVNKYEGGITTEELGPMIDTILAQGI >Mature_297_residues MQRWWRVFYGVIIVGLVGCGAATPTATPVAKSRVQAVLAASNLVVGPNRLPIGLIVDGSPINDPNVQVKLRLYYLDGTDA EKTQVAGEGSADYFGQGLPAGIYVTYPDFKKAGDWGVEVEATLPGKEPTVSTLRLSVLAQDPTPAIGSKAIAVDTPTVKT APDLSQISSDPNPNPALYQLSIADAITSGKPTAILFGTPGFCKTATCGPSVTVLGNLQKTYGEKMNFIHVEVYKFPFSES VQANPPLLVPAMAEWRLQSEPWLFLLGKDGTIVNKYEGGITTEELGPMIDTILAQGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31548; Mature: 31548
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRWWRVFYGVIIVGLVGCGAATPTATPVAKSRVQAVLAASNLVVGPNRLPIGLIVDGSP CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEEECCCC INDPNVQVKLRLYYLDGTDAEKTQVAGEGSADYFGQGLPAGIYVTYPDFKKAGDWGVEVE CCCCCEEEEEEEEEECCCCCCCEEECCCCCHHHHCCCCCCCEEEECCCCCCCCCCCEEEE ATLPGKEPTVSTLRLSVLAQDPTPAIGSKAIAVDTPTVKTAPDLSQISSDPNPNPALYQL EECCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCEEEE SIADAITSGKPTAILFGTPGFCKTATCGPSVTVLGNLQKTYGEKMNFIHVEVYKFPFSES EEHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCHHHHCCCCCEEEEEEEECCCCCC VQANPPLLVPAMAEWRLQSEPWLFLLGKDGTIVNKYEGGITTEELGPMIDTILAQGI CCCCCCEEEECHHHEEECCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MQRWWRVFYGVIIVGLVGCGAATPTATPVAKSRVQAVLAASNLVVGPNRLPIGLIVDGSP CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEEECCCC INDPNVQVKLRLYYLDGTDAEKTQVAGEGSADYFGQGLPAGIYVTYPDFKKAGDWGVEVE CCCCCEEEEEEEEEECCCCCCCEEECCCCCHHHHCCCCCCCEEEECCCCCCCCCCCEEEE ATLPGKEPTVSTLRLSVLAQDPTPAIGSKAIAVDTPTVKTAPDLSQISSDPNPNPALYQL EECCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCEEEE SIADAITSGKPTAILFGTPGFCKTATCGPSVTVLGNLQKTYGEKMNFIHVEVYKFPFSES EEHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCHHHHCCCCCEEEEEEEECCCCCC VQANPPLLVPAMAEWRLQSEPWLFLLGKDGTIVNKYEGGITTEELGPMIDTILAQGI CCCCCCEEEECHHHEEECCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA