Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901231

Identifier: 159901231

GI number: 159901231

Start: 6028373

End: 6028864

Strand: Direct

Name: 159901231

Synonym: Haur_4719

Alternate gene names: NA

Gene position: 6028373-6028864 (Clockwise)

Preceding gene: 159901230

Following gene: 159901236

Centisome position: 94.99

GC content: 48.98

Gene sequence:

>492_bases
ATGTCAGATCCAACTTTGATTGATTCGATGCTGCGTTGGCATCTGCCGCTGATGAGCCGCACGCTCGAAACCTTGGGGCA
TATTTTAGCTCGCGTCAGCCAGCAACAAGCCACGACCTTGCGCGATGGCGCTGATGGCTGGACGGTTTTGGAAGTGGTTT
GTCATTTGCGCGATTACGATCAAATTTTTCAAGAACGAGCAAGCAGTATTCTCGAACAGGATAATCCGCTGTTTCAAAGC
TACAATCCCGATCAGCTTGCCCGTGAGCGCGACTACAACGCCAGCGAGTTGCATGCTGTTTATGCAGAATTATGTGTTTC
ACGCACGCGCTACGTGGAGTTTTTCCAAAGCCTTAGCCCTGAACAATGGCAGCGCCATGGTACCCATCCCAAATTAGGCG
TATTCTCATTGGCTGATGCTTTGATGCAGGTAACTGGCCACGATCTGATACATATGGAGCAAATTACACGAATTTTGTTG
CAGGCTGAATAA

Upstream 100 bases:

>100_bases
ATTTTTCGCTGACCGATGCAGCGATGCAAGTTGGCATCCACGATGTTACCCATCTTGAGCAAATTACTCGAATTTTGTTG
CAAGCAAAGGGGCAATAAGC

Downstream 100 bases:

>100_bases
CCTGATTCCCTCACCCCAACCCCTCTCCTGCCGCAGTGTTTAAGGGCGGACAGGTTGGGGAATGGGTATTCATCAGTGTT
AGGGGATGGCCGTCCCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MSDPTLIDSMLRWHLPLMSRTLETLGHILARVSQQQATTLRDGADGWTVLEVVCHLRDYDQIFQERASSILEQDNPLFQS
YNPDQLARERDYNASELHAVYAELCVSRTRYVEFFQSLSPEQWQRHGTHPKLGVFSLADALMQVTGHDLIHMEQITRILL
QAE

Sequences:

>Translated_163_residues
MSDPTLIDSMLRWHLPLMSRTLETLGHILARVSQQQATTLRDGADGWTVLEVVCHLRDYDQIFQERASSILEQDNPLFQS
YNPDQLARERDYNASELHAVYAELCVSRTRYVEFFQSLSPEQWQRHGTHPKLGVFSLADALMQVTGHDLIHMEQITRILL
QAE
>Mature_162_residues
SDPTLIDSMLRWHLPLMSRTLETLGHILARVSQQQATTLRDGADGWTVLEVVCHLRDYDQIFQERASSILEQDNPLFQSY
NPDQLARERDYNASELHAVYAELCVSRTRYVEFFQSLSPEQWQRHGTHPKLGVFSLADALMQVTGHDLIHMEQITRILLQ
AE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18850; Mature: 18718

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPTLIDSMLRWHLPLMSRTLETLGHILARVSQQQATTLRDGADGWTVLEVVCHLRDYD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QIFQERASSILEQDNPLFQSYNPDQLARERDYNASELHAVYAELCVSRTRYVEFFQSLSP
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
EQWQRHGTHPKLGVFSLADALMQVTGHDLIHMEQITRILLQAE
HHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDPTLIDSMLRWHLPLMSRTLETLGHILARVSQQQATTLRDGADGWTVLEVVCHLRDYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QIFQERASSILEQDNPLFQSYNPDQLARERDYNASELHAVYAELCVSRTRYVEFFQSLSP
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
EQWQRHGTHPKLGVFSLADALMQVTGHDLIHMEQITRILLQAE
HHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA