| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901230
Identifier: 159901230
GI number: 159901230
Start: 6027873
End: 6028370
Strand: Direct
Name: 159901230
Synonym: Haur_4718
Alternate gene names: NA
Gene position: 6027873-6028370 (Clockwise)
Preceding gene: 159901227
Following gene: 159901231
Centisome position: 94.98
GC content: 48.39
Gene sequence:
>498_bases ATGAGCAACCACGATCAATTAGCTTTAGTTCGCCAACGCCATATTCATTTGATGCAATTGACCCTTGATACCCTAGGTCA TGTGTTGAGCGATGTAACTCAAGCCCAAGCTACCACGTTTCGCGATGGCCCCGATGGCTGGACAGTGGTCGAAGTGCTGT GCCATTTACGCGATTACGACCAGATCTTCCTTGAGCGAGCGATTATGATGCGTGATGGCGATTTTCCGTTATTGCCAATC TATGATCACGAAGCTATGGTGATTGAGCGCAACTACAATAGTAACGATCTGCGCACAGTCTATGCTGCCTTGCAGGAATC ACGCCCGCGTTTTATCGCATTTTTCCAAGCACTCACGCCTGAGCAATGGGAAAAAGCTGGTACGCACCCCGAACGTGGCT ATTTTTCGCTGACCGATGCAGCGATGCAAGTTGGCATCCACGATGTTACCCATCTTGAGCAAATTACTCGAATTTTGTTG CAAGCAAAGGGGCAATAA
Upstream 100 bases:
>100_bases AGCCACAATCTCGTGCTCGATCTGCTTCAAATTGTCCATATCCAAGGCTTGCTAGGTTTGCTATGCTTACAAGGTATTGG TGTGTTACGAGGAAATGCGC
Downstream 100 bases:
>100_bases GCATGTCAGATCCAACTTTGATTGATTCGATGCTGCGTTGGCATCTGCCGCTGATGAGCCGCACGCTCGAAACCTTGGGG CATATTTTAGCTCGCGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSNHDQLALVRQRHIHLMQLTLDTLGHVLSDVTQAQATTFRDGPDGWTVVEVLCHLRDYDQIFLERAIMMRDGDFPLLPI YDHEAMVIERNYNSNDLRTVYAALQESRPRFIAFFQALTPEQWEKAGTHPERGYFSLTDAAMQVGIHDVTHLEQITRILL QAKGQ
Sequences:
>Translated_165_residues MSNHDQLALVRQRHIHLMQLTLDTLGHVLSDVTQAQATTFRDGPDGWTVVEVLCHLRDYDQIFLERAIMMRDGDFPLLPI YDHEAMVIERNYNSNDLRTVYAALQESRPRFIAFFQALTPEQWEKAGTHPERGYFSLTDAAMQVGIHDVTHLEQITRILL QAKGQ >Mature_164_residues SNHDQLALVRQRHIHLMQLTLDTLGHVLSDVTQAQATTFRDGPDGWTVVEVLCHLRDYDQIFLERAIMMRDGDFPLLPIY DHEAMVIERNYNSNDLRTVYAALQESRPRFIAFFQALTPEQWEKAGTHPERGYFSLTDAAMQVGIHDVTHLEQITRILLQ AKGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19044; Mature: 18913
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHDQLALVRQRHIHLMQLTLDTLGHVLSDVTQAQATTFRDGPDGWTVVEVLCHLRDYD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHH QIFLERAIMMRDGDFPLLPIYDHEAMVIERNYNSNDLRTVYAALQESRPRFIAFFQALTP HHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCH EQWEKAGTHPERGYFSLTDAAMQVGIHDVTHLEQITRILLQAKGQ HHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNHDQLALVRQRHIHLMQLTLDTLGHVLSDVTQAQATTFRDGPDGWTVVEVLCHLRDYD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHH QIFLERAIMMRDGDFPLLPIYDHEAMVIERNYNSNDLRTVYAALQESRPRFIAFFQALTP HHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCH EQWEKAGTHPERGYFSLTDAAMQVGIHDVTHLEQITRILLQAKGQ HHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA