| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901236
Identifier: 159901236
GI number: 159901236
Start: 6033366
End: 6035507
Strand: Direct
Name: 159901236
Synonym: Haur_4724
Alternate gene names: NA
Gene position: 6033366-6035507 (Clockwise)
Preceding gene: 159901231
Following gene: 159901237
Centisome position: 95.06
GC content: 53.27
Gene sequence:
>2142_bases ATGGATCTACACTGCTATTTTTTGGGGCAGCCCCAAATTGTTTACAACCAAACGGCAATCCATGTGACCAATGCCAAGGC TGTGGCGCTGTTGGCCTATTTGGCATGTCACAATCAACCGCAACCGCGTGAACGAATTTTAGGCTTGCTCTGGGCTGAAA GTAGCAGTAGTGCTGCGCGAAAGAACCTGAGCAATTGTCTTTGGCAGTTGCGCCAACAGCTTGGCGAGAGCTGCATCCTT AGCCATGACGATAGGCTGAGTTTGGGGGAGGCGGTTTGGAGCGATCTGCAGGCACTGTGGCAATTGGATCAGCCTGATCA CGCAACCTTGCTCAATTGTTATCGTGGCCCGTTGCTTGATGGCCTGAATGTACGCGATGCGCCAGAGTTTGAATTGTGGT TGTTGCACGAGCGCAATCGGCTGCTGCAGCATTATCTCCAACTGCTTGAGCAAGCCTTACAAACAACCAATGATCAGCAA CAAAAACTGCAACTTGCCAATCATGGTTTGGGCGTTGACCCGCTGCACGAACCATTCGTTCAAGCGGCGATTCAGGCTTG TTTGGCGCTTGAGCAACGGGCCAATGCCTTACAGCACTACACCAATTTCCAACATCAGCTTGAGCAACAACTCGGCTTAG AGCCAGCCGCCGCCACTCAAGCCTTGCGTCTGCAAATTCTCGGTACTTCCACAAATCCAACAATCAAGCCGCCGCATCTG CCAACGCCGCGCAATACCAGCAAATTAATTGGCCGCGAGCCGGATTATGCGCTGTTGCATGCTGCTTGGCAACGCAGTTT GCAAGGCCAACTTCAAGTGGTATTGCTCACTGGTGAGTTGGGCATTGGCAAAACCAGTTTATGGCAAACATGGCTAGGCC AAATTCGCGAGGGGCATCAGGTTGTGGTTGCCCGTGGGCTGGAAATTACCCAATTGCTGCCATTCGCGCCCTTTTTGGCA TGGACTGACCAAACCGCACTGCTTGATTGGCTGTTTGGAGCGCAATCGCCGCTATCGCCCTACTGGCAAAGCGAATTGGC TCGCTTGATTCCCGATTTCAAACAGCGCGAGATTATTCCGCCGCTGAGCAATGCCACGCCTGCCGAAGAACGCCGCCGCA TCTTCGAGGCCATGTTGCAAGTACTGGCGCTGTTTGCCGATCAGCCATTGGTATTGGTGCTCGATGACGCGCATTGGGCC GATCAACTTTCGCTGGGCTGGCTGGGTTATGCCGCCGAGCGCTTACAATCCAAACCTGTGCTGATCATTTTGACCTATCG CGCCAACCAAGTACAGGGCGAATTGGCAAATTTAATCTGGCATTGGCAACGCAACCATATCGCCCAACGCCATGAACTAC AGCCGCTCAGCCCACGCGAAAGCGAGCAATTGGTATTGCAACAAGGCGGCGATCAACAGCGGAGTGCCCAACTGTATCGG CGCAGTCGCGGTAATCCCTACTTTTTACATGAGCTATTACATGCTCCAAGCGAGCAAATTCCTAGCTCGCTGGCCGATGT GGTGGGTTTGCGCTTAACCAACCTGCCAAGTGCCGCCCAAGCCTTGCTCTCTGCTGCCATGATTTTGGGCATCAACAGCA GGCTGGAACTGCTCCAACAAGTCAGTCATTGCGCCGAAGATCAAGCACTCGATATGCTTGATCTGCTATTACAGCAAGGT ATTTTGGCCGAGCAAGCGGGCCAGTATCAAATTGCCCATCCATTAATTGGCGAAGTTTGGCAGCAGCAGCTGAGTCCTGC TCGTCGCCAAGTATTCCATCGGCGAGCTGCCGAAGCGCTAGCCGAGAGCTATGCAGGCATGTTGCCGATGGTTGCTGTGC AGTTGGCAAGCCATTACGAAGCGGCTGGCAAAGCCCACGAAGCTGCCCGCTATGCCGAAATGGCAGGCTACCATGCCTTG ATTATGGCGGCTGGCTCAGAAGCAGTTGTGTTGTATCAACGAGCGTTAACCTTAGAGCCAACGCCATTGCGCCAACTTGG TTTGGGGCGAGCTTGGGTATTGCAAGGCGATTTAGCTGCTGCTCGGGCGAATTTCAATGCAGCGCGGCAAGCCTTTGAAT TGCTTGGTGATTTTGAGGGTGCGGCCCAAGCAAGCCTTCAATTAGCAGCAAGTTATCAATAG
Upstream 100 bases:
>100_bases ATCGTTGGCAGCTTTCCCGTTTGGTTTCCCAAATCGATTCCGACATTCGGTGATTTTGGTTTAAAATGGTTGCTAGGTGA CTTTGGCTTGGGAATTGGCG
Downstream 100 bases:
>100_bases AAGTTGAGGATCAGTTGTTGGGTAGGTTTTAGCCCCCTCACCCCCGACCCCTCTCCCACTGCGGCGGGCGAGGGGAGATC CGATATCAAATTGAAGGATT
Product: transcriptional activator domain-containing protein
Products: NA
Alternate protein names: Transcriptional Activator Domain-Containing Protein; Transcriptional Regulator LuxR Family; Transcriptional Regulator; SARP Family Transcriptional Regulator; Transcriptional Regulator SARP Family; Transcriptional Activator Domain Protein; LuxR-Family Transcriptional Regulator; Regulatory Protein; Adenylate Cyclase; Adenylate/Guanylate Cyclase; ATPase-Like Protein; AfsR/DnrI/RedD Family Transcriptional Regulator; Serine/Threonine Protein Kinase; Regulatory Protein LuxR; Adenylyl Cyclase Class-3/4/Guanylyl Cyclase; ATP-Dependent Transcriptional Regulator; Bacterial Transcriptional Activator Domain Family; XRE Family Transcriptional Regulator; Transcriptional Activator Domain; 4-Phytase; Transcriptional Regulator Sarp Family; Serine/Threonine Kinase Regulatory Protein; Protein Kinase; Trifolitoxin Synthesis TfuA; LuxR Family Regulator; Transcriptional Regulator XRE Family; Transcriptional Activator Domain Containing Protein; Adenylate Cyclase Family Protein
Number of amino acids: Translated: 713; Mature: 713
Protein sequence:
>713_residues MDLHCYFLGQPQIVYNQTAIHVTNAKAVALLAYLACHNQPQPRERILGLLWAESSSSAARKNLSNCLWQLRQQLGESCIL SHDDRLSLGEAVWSDLQALWQLDQPDHATLLNCYRGPLLDGLNVRDAPEFELWLLHERNRLLQHYLQLLEQALQTTNDQQ QKLQLANHGLGVDPLHEPFVQAAIQACLALEQRANALQHYTNFQHQLEQQLGLEPAAATQALRLQILGTSTNPTIKPPHL PTPRNTSKLIGREPDYALLHAAWQRSLQGQLQVVLLTGELGIGKTSLWQTWLGQIREGHQVVVARGLEITQLLPFAPFLA WTDQTALLDWLFGAQSPLSPYWQSELARLIPDFKQREIIPPLSNATPAEERRRIFEAMLQVLALFADQPLVLVLDDAHWA DQLSLGWLGYAAERLQSKPVLIILTYRANQVQGELANLIWHWQRNHIAQRHELQPLSPRESEQLVLQQGGDQQRSAQLYR RSRGNPYFLHELLHAPSEQIPSSLADVVGLRLTNLPSAAQALLSAAMILGINSRLELLQQVSHCAEDQALDMLDLLLQQG ILAEQAGQYQIAHPLIGEVWQQQLSPARRQVFHRRAAEALAESYAGMLPMVAVQLASHYEAAGKAHEAARYAEMAGYHAL IMAAGSEAVVLYQRALTLEPTPLRQLGLGRAWVLQGDLAAARANFNAARQAFELLGDFEGAAQASLQLAASYQ
Sequences:
>Translated_713_residues MDLHCYFLGQPQIVYNQTAIHVTNAKAVALLAYLACHNQPQPRERILGLLWAESSSSAARKNLSNCLWQLRQQLGESCIL SHDDRLSLGEAVWSDLQALWQLDQPDHATLLNCYRGPLLDGLNVRDAPEFELWLLHERNRLLQHYLQLLEQALQTTNDQQ QKLQLANHGLGVDPLHEPFVQAAIQACLALEQRANALQHYTNFQHQLEQQLGLEPAAATQALRLQILGTSTNPTIKPPHL PTPRNTSKLIGREPDYALLHAAWQRSLQGQLQVVLLTGELGIGKTSLWQTWLGQIREGHQVVVARGLEITQLLPFAPFLA WTDQTALLDWLFGAQSPLSPYWQSELARLIPDFKQREIIPPLSNATPAEERRRIFEAMLQVLALFADQPLVLVLDDAHWA DQLSLGWLGYAAERLQSKPVLIILTYRANQVQGELANLIWHWQRNHIAQRHELQPLSPRESEQLVLQQGGDQQRSAQLYR RSRGNPYFLHELLHAPSEQIPSSLADVVGLRLTNLPSAAQALLSAAMILGINSRLELLQQVSHCAEDQALDMLDLLLQQG ILAEQAGQYQIAHPLIGEVWQQQLSPARRQVFHRRAAEALAESYAGMLPMVAVQLASHYEAAGKAHEAARYAEMAGYHAL IMAAGSEAVVLYQRALTLEPTPLRQLGLGRAWVLQGDLAAARANFNAARQAFELLGDFEGAAQASLQLAASYQ >Mature_713_residues MDLHCYFLGQPQIVYNQTAIHVTNAKAVALLAYLACHNQPQPRERILGLLWAESSSSAARKNLSNCLWQLRQQLGESCIL SHDDRLSLGEAVWSDLQALWQLDQPDHATLLNCYRGPLLDGLNVRDAPEFELWLLHERNRLLQHYLQLLEQALQTTNDQQ QKLQLANHGLGVDPLHEPFVQAAIQACLALEQRANALQHYTNFQHQLEQQLGLEPAAATQALRLQILGTSTNPTIKPPHL PTPRNTSKLIGREPDYALLHAAWQRSLQGQLQVVLLTGELGIGKTSLWQTWLGQIREGHQVVVARGLEITQLLPFAPFLA WTDQTALLDWLFGAQSPLSPYWQSELARLIPDFKQREIIPPLSNATPAEERRRIFEAMLQVLALFADQPLVLVLDDAHWA DQLSLGWLGYAAERLQSKPVLIILTYRANQVQGELANLIWHWQRNHIAQRHELQPLSPRESEQLVLQQGGDQQRSAQLYR RSRGNPYFLHELLHAPSEQIPSSLADVVGLRLTNLPSAAQALLSAAMILGINSRLELLQQVSHCAEDQALDMLDLLLQQG ILAEQAGQYQIAHPLIGEVWQQQLSPARRQVFHRRAAEALAESYAGMLPMVAVQLASHYEAAGKAHEAARYAEMAGYHAL IMAAGSEAVVLYQRALTLEPTPLRQLGLGRAWVLQGDLAAARANFNAARQAFELLGDFEGAAQASLQLAASYQ
Specific function: Unknown
COG id: COG3899
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79690; Mature: 79690
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLHCYFLGQPQIVYNQTAIHVTNAKAVALLAYLACHNQPQPRERILGLLWAESSSSAAR CCEEEEEECCCEEEEECEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHH KNLSNCLWQLRQQLGESCILSHDDRLSLGEAVWSDLQALWQLDQPDHATLLNCYRGPLLD HHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC GLNVRDAPEFELWLLHERNRLLQHYLQLLEQALQTTNDQQQKLQLANHGLGVDPLHEPFV CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH QAAIQACLALEQRANALQHYTNFQHQLEQQLGLEPAAATQALRLQILGTSTNPTIKPPHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCCCCCCCCC PTPRNTSKLIGREPDYALLHAAWQRSLQGQLQVVLLTGELGIGKTSLWQTWLGQIREGHQ CCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCE VVVARGLEITQLLPFAPFLAWTDQTALLDWLFGAQSPLSPYWQSELARLIPDFKQREIIP EEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCC PLSNATPAEERRRIFEAMLQVLALFADQPLVLVLDDAHWADQLSLGWLGYAAERLQSKPV CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCE LIILTYRANQVQGELANLIWHWQRNHIAQRHELQPLSPRESEQLVLQQGGDQQRSAQLYR EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHH RSRGNPYFLHELLHAPSEQIPSSLADVVGLRLTNLPSAAQALLSAAMILGINSRLELLQQ HCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH VSHCAEDQALDMLDLLLQQGILAEQAGQYQIAHPLIGEVWQQQLSPARRQVFHRRAAEAL HHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHH AESYAGMLPMVAVQLASHYEAAGKAHEAARYAEMAGYHALIMAAGSEAVVLYQRALTLEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEHHHHCCCC TPLRQLGLGRAWVLQGDLAAARANFNAARQAFELLGDFEGAAQASLQLAASYQ CCHHHHCCCCEEEEECCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure MDLHCYFLGQPQIVYNQTAIHVTNAKAVALLAYLACHNQPQPRERILGLLWAESSSSAAR CCEEEEEECCCEEEEECEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHH KNLSNCLWQLRQQLGESCILSHDDRLSLGEAVWSDLQALWQLDQPDHATLLNCYRGPLLD HHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC GLNVRDAPEFELWLLHERNRLLQHYLQLLEQALQTTNDQQQKLQLANHGLGVDPLHEPFV CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH QAAIQACLALEQRANALQHYTNFQHQLEQQLGLEPAAATQALRLQILGTSTNPTIKPPHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCCCCCCCCC PTPRNTSKLIGREPDYALLHAAWQRSLQGQLQVVLLTGELGIGKTSLWQTWLGQIREGHQ CCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCE VVVARGLEITQLLPFAPFLAWTDQTALLDWLFGAQSPLSPYWQSELARLIPDFKQREIIP EEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCC PLSNATPAEERRRIFEAMLQVLALFADQPLVLVLDDAHWADQLSLGWLGYAAERLQSKPV CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCE LIILTYRANQVQGELANLIWHWQRNHIAQRHELQPLSPRESEQLVLQQGGDQQRSAQLYR EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHH RSRGNPYFLHELLHAPSEQIPSSLADVVGLRLTNLPSAAQALLSAAMILGINSRLELLQQ HCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH VSHCAEDQALDMLDLLLQQGILAEQAGQYQIAHPLIGEVWQQQLSPARRQVFHRRAAEAL HHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHH AESYAGMLPMVAVQLASHYEAAGKAHEAARYAEMAGYHALIMAAGSEAVVLYQRALTLEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEHHHHCCCC TPLRQLGLGRAWVLQGDLAAARANFNAARQAFELLGDFEGAAQASLQLAASYQ CCHHHHCCCCEEEEECCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA