Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901236

Identifier: 159901236

GI number: 159901236

Start: 6033366

End: 6035507

Strand: Direct

Name: 159901236

Synonym: Haur_4724

Alternate gene names: NA

Gene position: 6033366-6035507 (Clockwise)

Preceding gene: 159901231

Following gene: 159901237

Centisome position: 95.06

GC content: 53.27

Gene sequence:

>2142_bases
ATGGATCTACACTGCTATTTTTTGGGGCAGCCCCAAATTGTTTACAACCAAACGGCAATCCATGTGACCAATGCCAAGGC
TGTGGCGCTGTTGGCCTATTTGGCATGTCACAATCAACCGCAACCGCGTGAACGAATTTTAGGCTTGCTCTGGGCTGAAA
GTAGCAGTAGTGCTGCGCGAAAGAACCTGAGCAATTGTCTTTGGCAGTTGCGCCAACAGCTTGGCGAGAGCTGCATCCTT
AGCCATGACGATAGGCTGAGTTTGGGGGAGGCGGTTTGGAGCGATCTGCAGGCACTGTGGCAATTGGATCAGCCTGATCA
CGCAACCTTGCTCAATTGTTATCGTGGCCCGTTGCTTGATGGCCTGAATGTACGCGATGCGCCAGAGTTTGAATTGTGGT
TGTTGCACGAGCGCAATCGGCTGCTGCAGCATTATCTCCAACTGCTTGAGCAAGCCTTACAAACAACCAATGATCAGCAA
CAAAAACTGCAACTTGCCAATCATGGTTTGGGCGTTGACCCGCTGCACGAACCATTCGTTCAAGCGGCGATTCAGGCTTG
TTTGGCGCTTGAGCAACGGGCCAATGCCTTACAGCACTACACCAATTTCCAACATCAGCTTGAGCAACAACTCGGCTTAG
AGCCAGCCGCCGCCACTCAAGCCTTGCGTCTGCAAATTCTCGGTACTTCCACAAATCCAACAATCAAGCCGCCGCATCTG
CCAACGCCGCGCAATACCAGCAAATTAATTGGCCGCGAGCCGGATTATGCGCTGTTGCATGCTGCTTGGCAACGCAGTTT
GCAAGGCCAACTTCAAGTGGTATTGCTCACTGGTGAGTTGGGCATTGGCAAAACCAGTTTATGGCAAACATGGCTAGGCC
AAATTCGCGAGGGGCATCAGGTTGTGGTTGCCCGTGGGCTGGAAATTACCCAATTGCTGCCATTCGCGCCCTTTTTGGCA
TGGACTGACCAAACCGCACTGCTTGATTGGCTGTTTGGAGCGCAATCGCCGCTATCGCCCTACTGGCAAAGCGAATTGGC
TCGCTTGATTCCCGATTTCAAACAGCGCGAGATTATTCCGCCGCTGAGCAATGCCACGCCTGCCGAAGAACGCCGCCGCA
TCTTCGAGGCCATGTTGCAAGTACTGGCGCTGTTTGCCGATCAGCCATTGGTATTGGTGCTCGATGACGCGCATTGGGCC
GATCAACTTTCGCTGGGCTGGCTGGGTTATGCCGCCGAGCGCTTACAATCCAAACCTGTGCTGATCATTTTGACCTATCG
CGCCAACCAAGTACAGGGCGAATTGGCAAATTTAATCTGGCATTGGCAACGCAACCATATCGCCCAACGCCATGAACTAC
AGCCGCTCAGCCCACGCGAAAGCGAGCAATTGGTATTGCAACAAGGCGGCGATCAACAGCGGAGTGCCCAACTGTATCGG
CGCAGTCGCGGTAATCCCTACTTTTTACATGAGCTATTACATGCTCCAAGCGAGCAAATTCCTAGCTCGCTGGCCGATGT
GGTGGGTTTGCGCTTAACCAACCTGCCAAGTGCCGCCCAAGCCTTGCTCTCTGCTGCCATGATTTTGGGCATCAACAGCA
GGCTGGAACTGCTCCAACAAGTCAGTCATTGCGCCGAAGATCAAGCACTCGATATGCTTGATCTGCTATTACAGCAAGGT
ATTTTGGCCGAGCAAGCGGGCCAGTATCAAATTGCCCATCCATTAATTGGCGAAGTTTGGCAGCAGCAGCTGAGTCCTGC
TCGTCGCCAAGTATTCCATCGGCGAGCTGCCGAAGCGCTAGCCGAGAGCTATGCAGGCATGTTGCCGATGGTTGCTGTGC
AGTTGGCAAGCCATTACGAAGCGGCTGGCAAAGCCCACGAAGCTGCCCGCTATGCCGAAATGGCAGGCTACCATGCCTTG
ATTATGGCGGCTGGCTCAGAAGCAGTTGTGTTGTATCAACGAGCGTTAACCTTAGAGCCAACGCCATTGCGCCAACTTGG
TTTGGGGCGAGCTTGGGTATTGCAAGGCGATTTAGCTGCTGCTCGGGCGAATTTCAATGCAGCGCGGCAAGCCTTTGAAT
TGCTTGGTGATTTTGAGGGTGCGGCCCAAGCAAGCCTTCAATTAGCAGCAAGTTATCAATAG

Upstream 100 bases:

>100_bases
ATCGTTGGCAGCTTTCCCGTTTGGTTTCCCAAATCGATTCCGACATTCGGTGATTTTGGTTTAAAATGGTTGCTAGGTGA
CTTTGGCTTGGGAATTGGCG

Downstream 100 bases:

>100_bases
AAGTTGAGGATCAGTTGTTGGGTAGGTTTTAGCCCCCTCACCCCCGACCCCTCTCCCACTGCGGCGGGCGAGGGGAGATC
CGATATCAAATTGAAGGATT

Product: transcriptional activator domain-containing protein

Products: NA

Alternate protein names: Transcriptional Activator Domain-Containing Protein; Transcriptional Regulator LuxR Family; Transcriptional Regulator; SARP Family Transcriptional Regulator; Transcriptional Regulator SARP Family; Transcriptional Activator Domain Protein; LuxR-Family Transcriptional Regulator; Regulatory Protein; Adenylate Cyclase; Adenylate/Guanylate Cyclase; ATPase-Like Protein; AfsR/DnrI/RedD Family Transcriptional Regulator; Serine/Threonine Protein Kinase; Regulatory Protein LuxR; Adenylyl Cyclase Class-3/4/Guanylyl Cyclase; ATP-Dependent Transcriptional Regulator; Bacterial Transcriptional Activator Domain Family; XRE Family Transcriptional Regulator; Transcriptional Activator Domain; 4-Phytase; Transcriptional Regulator Sarp Family; Serine/Threonine Kinase Regulatory Protein; Protein Kinase; Trifolitoxin Synthesis TfuA; LuxR Family Regulator; Transcriptional Regulator XRE Family; Transcriptional Activator Domain Containing Protein; Adenylate Cyclase Family Protein

Number of amino acids: Translated: 713; Mature: 713

Protein sequence:

>713_residues
MDLHCYFLGQPQIVYNQTAIHVTNAKAVALLAYLACHNQPQPRERILGLLWAESSSSAARKNLSNCLWQLRQQLGESCIL
SHDDRLSLGEAVWSDLQALWQLDQPDHATLLNCYRGPLLDGLNVRDAPEFELWLLHERNRLLQHYLQLLEQALQTTNDQQ
QKLQLANHGLGVDPLHEPFVQAAIQACLALEQRANALQHYTNFQHQLEQQLGLEPAAATQALRLQILGTSTNPTIKPPHL
PTPRNTSKLIGREPDYALLHAAWQRSLQGQLQVVLLTGELGIGKTSLWQTWLGQIREGHQVVVARGLEITQLLPFAPFLA
WTDQTALLDWLFGAQSPLSPYWQSELARLIPDFKQREIIPPLSNATPAEERRRIFEAMLQVLALFADQPLVLVLDDAHWA
DQLSLGWLGYAAERLQSKPVLIILTYRANQVQGELANLIWHWQRNHIAQRHELQPLSPRESEQLVLQQGGDQQRSAQLYR
RSRGNPYFLHELLHAPSEQIPSSLADVVGLRLTNLPSAAQALLSAAMILGINSRLELLQQVSHCAEDQALDMLDLLLQQG
ILAEQAGQYQIAHPLIGEVWQQQLSPARRQVFHRRAAEALAESYAGMLPMVAVQLASHYEAAGKAHEAARYAEMAGYHAL
IMAAGSEAVVLYQRALTLEPTPLRQLGLGRAWVLQGDLAAARANFNAARQAFELLGDFEGAAQASLQLAASYQ

Sequences:

>Translated_713_residues
MDLHCYFLGQPQIVYNQTAIHVTNAKAVALLAYLACHNQPQPRERILGLLWAESSSSAARKNLSNCLWQLRQQLGESCIL
SHDDRLSLGEAVWSDLQALWQLDQPDHATLLNCYRGPLLDGLNVRDAPEFELWLLHERNRLLQHYLQLLEQALQTTNDQQ
QKLQLANHGLGVDPLHEPFVQAAIQACLALEQRANALQHYTNFQHQLEQQLGLEPAAATQALRLQILGTSTNPTIKPPHL
PTPRNTSKLIGREPDYALLHAAWQRSLQGQLQVVLLTGELGIGKTSLWQTWLGQIREGHQVVVARGLEITQLLPFAPFLA
WTDQTALLDWLFGAQSPLSPYWQSELARLIPDFKQREIIPPLSNATPAEERRRIFEAMLQVLALFADQPLVLVLDDAHWA
DQLSLGWLGYAAERLQSKPVLIILTYRANQVQGELANLIWHWQRNHIAQRHELQPLSPRESEQLVLQQGGDQQRSAQLYR
RSRGNPYFLHELLHAPSEQIPSSLADVVGLRLTNLPSAAQALLSAAMILGINSRLELLQQVSHCAEDQALDMLDLLLQQG
ILAEQAGQYQIAHPLIGEVWQQQLSPARRQVFHRRAAEALAESYAGMLPMVAVQLASHYEAAGKAHEAARYAEMAGYHAL
IMAAGSEAVVLYQRALTLEPTPLRQLGLGRAWVLQGDLAAARANFNAARQAFELLGDFEGAAQASLQLAASYQ
>Mature_713_residues
MDLHCYFLGQPQIVYNQTAIHVTNAKAVALLAYLACHNQPQPRERILGLLWAESSSSAARKNLSNCLWQLRQQLGESCIL
SHDDRLSLGEAVWSDLQALWQLDQPDHATLLNCYRGPLLDGLNVRDAPEFELWLLHERNRLLQHYLQLLEQALQTTNDQQ
QKLQLANHGLGVDPLHEPFVQAAIQACLALEQRANALQHYTNFQHQLEQQLGLEPAAATQALRLQILGTSTNPTIKPPHL
PTPRNTSKLIGREPDYALLHAAWQRSLQGQLQVVLLTGELGIGKTSLWQTWLGQIREGHQVVVARGLEITQLLPFAPFLA
WTDQTALLDWLFGAQSPLSPYWQSELARLIPDFKQREIIPPLSNATPAEERRRIFEAMLQVLALFADQPLVLVLDDAHWA
DQLSLGWLGYAAERLQSKPVLIILTYRANQVQGELANLIWHWQRNHIAQRHELQPLSPRESEQLVLQQGGDQQRSAQLYR
RSRGNPYFLHELLHAPSEQIPSSLADVVGLRLTNLPSAAQALLSAAMILGINSRLELLQQVSHCAEDQALDMLDLLLQQG
ILAEQAGQYQIAHPLIGEVWQQQLSPARRQVFHRRAAEALAESYAGMLPMVAVQLASHYEAAGKAHEAARYAEMAGYHAL
IMAAGSEAVVLYQRALTLEPTPLRQLGLGRAWVLQGDLAAARANFNAARQAFELLGDFEGAAQASLQLAASYQ

Specific function: Unknown

COG id: COG3899

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79690; Mature: 79690

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLHCYFLGQPQIVYNQTAIHVTNAKAVALLAYLACHNQPQPRERILGLLWAESSSSAAR
CCEEEEEECCCEEEEECEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHH
KNLSNCLWQLRQQLGESCILSHDDRLSLGEAVWSDLQALWQLDQPDHATLLNCYRGPLLD
HHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
GLNVRDAPEFELWLLHERNRLLQHYLQLLEQALQTTNDQQQKLQLANHGLGVDPLHEPFV
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH
QAAIQACLALEQRANALQHYTNFQHQLEQQLGLEPAAATQALRLQILGTSTNPTIKPPHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCCCCCCCCC
PTPRNTSKLIGREPDYALLHAAWQRSLQGQLQVVLLTGELGIGKTSLWQTWLGQIREGHQ
CCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCE
VVVARGLEITQLLPFAPFLAWTDQTALLDWLFGAQSPLSPYWQSELARLIPDFKQREIIP
EEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCC
PLSNATPAEERRRIFEAMLQVLALFADQPLVLVLDDAHWADQLSLGWLGYAAERLQSKPV
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCE
LIILTYRANQVQGELANLIWHWQRNHIAQRHELQPLSPRESEQLVLQQGGDQQRSAQLYR
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHH
RSRGNPYFLHELLHAPSEQIPSSLADVVGLRLTNLPSAAQALLSAAMILGINSRLELLQQ
HCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
VSHCAEDQALDMLDLLLQQGILAEQAGQYQIAHPLIGEVWQQQLSPARRQVFHRRAAEAL
HHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
AESYAGMLPMVAVQLASHYEAAGKAHEAARYAEMAGYHALIMAAGSEAVVLYQRALTLEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEHHHHCCCC
TPLRQLGLGRAWVLQGDLAAARANFNAARQAFELLGDFEGAAQASLQLAASYQ
CCHHHHCCCCEEEEECCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MDLHCYFLGQPQIVYNQTAIHVTNAKAVALLAYLACHNQPQPRERILGLLWAESSSSAAR
CCEEEEEECCCEEEEECEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHH
KNLSNCLWQLRQQLGESCILSHDDRLSLGEAVWSDLQALWQLDQPDHATLLNCYRGPLLD
HHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
GLNVRDAPEFELWLLHERNRLLQHYLQLLEQALQTTNDQQQKLQLANHGLGVDPLHEPFV
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH
QAAIQACLALEQRANALQHYTNFQHQLEQQLGLEPAAATQALRLQILGTSTNPTIKPPHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCCCCCCCCCC
PTPRNTSKLIGREPDYALLHAAWQRSLQGQLQVVLLTGELGIGKTSLWQTWLGQIREGHQ
CCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCE
VVVARGLEITQLLPFAPFLAWTDQTALLDWLFGAQSPLSPYWQSELARLIPDFKQREIIP
EEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCC
PLSNATPAEERRRIFEAMLQVLALFADQPLVLVLDDAHWADQLSLGWLGYAAERLQSKPV
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCE
LIILTYRANQVQGELANLIWHWQRNHIAQRHELQPLSPRESEQLVLQQGGDQQRSAQLYR
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHH
RSRGNPYFLHELLHAPSEQIPSSLADVVGLRLTNLPSAAQALLSAAMILGINSRLELLQQ
HCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
VSHCAEDQALDMLDLLLQQGILAEQAGQYQIAHPLIGEVWQQQLSPARRQVFHRRAAEAL
HHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
AESYAGMLPMVAVQLASHYEAAGKAHEAARYAEMAGYHALIMAAGSEAVVLYQRALTLEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEHHHHCCCC
TPLRQLGLGRAWVLQGDLAAARANFNAARQAFELLGDFEGAAQASLQLAASYQ
CCHHHHCCCCEEEEECCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA