| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901190
Identifier: 159901190
GI number: 159901190
Start: 5975906
End: 5976922
Strand: Direct
Name: 159901190
Synonym: Haur_4678
Alternate gene names: NA
Gene position: 5975906-5976922 (Clockwise)
Preceding gene: 159901189
Following gene: 159901198
Centisome position: 94.16
GC content: 51.13
Gene sequence:
>1017_bases ATGCCAAAACGTGTCATGCTGATTTTAGGGTTATTGCTGGGGTTAACCCTTTGGCCCAGAGCGGCCTCAGCTCATGAAGT CTGCTTCCCCGAAGATCAAAGCCCTCACTGTTTGAGTGACCCATTTAGCGATTATTGGGAAGCTAACGGCGGCCTGCCCG TTTTTGGTTATCCAATTACCACGGTCAACCGCGAACAAAATCGCGAAACTGGCAAAGTCTATCGGACCCAATGGATGGAA CGCAATCGTTTTGAGTTGCATCCGGAAAATACGGGCACGCCTTATGAGGTTTTGCTGGGTTTATTGGGCAAAGATCGCTT GGCACAACTGGGCCGCCAACCTGATTCAGCAGAATCTGGGCCAAAGGCTGGCTGTTTGTGGTTCAAAGAAACTGGGCACA ATGTCTGTGATCAAGGCAATGGGATTGGCTTCAAAAGCTATTGGCAAGCCAATGGCTTGAAAATCGATGGATTGGATGCC TATGCACGTTCGTTACAGTTGTTTGGTTTGCCCTTGACTGAGCCAAAAATGGAGCGGAACAGCAGTGGCGATTTAGTCGA AACCCAATGGTTTGAGCGTGCTCGCTTCGAGTGGCATCCCAATAATCCCAATAATTTTAAGGTGTTGTTGGGCTTGCTCG GCAAAGAGGTGCGCGGAACCACTCCACCAACCACGCCGCCAACCACTTCACCGCCAACGACCGCCAATTGCACCATGAAC GCGCCAGCAGTCGCCGAAGGCGCACAGGCTTGGGTGGTCTATCCCGAAATTGCTAGCAATACAACCCAAACGGTCTGTGT GCGCTTGACGATTAGTGCCAAGCCTAAGAGCGGGGCAACTGCCACCGTTGAAATCGATTTGGCCAGCGGAACCCAATCGC TGATTGGCTTGACCGATAGTAGCGGCATTGCCACGATTCAGTTCAAAGTTGGCAGCCAATCAAGTGGGCGGCGCAATGAT GTACGGGCCAGTTTCAGCACAGGTCAAACTGCTACAACCAGCTTTATAATCAAATAA
Upstream 100 bases:
>100_bases CAGTGAGGCTGGCTGCTGTTACGGTGGCCAGCTAAACGTGCTTAATCTATATCATTTTTAAATGATTACCATACAATTGT ACGATAGGAAGGTGATTGAT
Downstream 100 bases:
>100_bases GTTTGGCGATATTGAGCGCGTTGGGTCATTATCCAACGCGCTATGCTTGGAGATTTGGCTCATCCAAAACCTCAGCCAAA TCGAGCAATTCTGGCTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MPKRVMLILGLLLGLTLWPRAASAHEVCFPEDQSPHCLSDPFSDYWEANGGLPVFGYPITTVNREQNRETGKVYRTQWME RNRFELHPENTGTPYEVLLGLLGKDRLAQLGRQPDSAESGPKAGCLWFKETGHNVCDQGNGIGFKSYWQANGLKIDGLDA YARSLQLFGLPLTEPKMERNSSGDLVETQWFERARFEWHPNNPNNFKVLLGLLGKEVRGTTPPTTPPTTSPPTTANCTMN APAVAEGAQAWVVYPEIASNTTQTVCVRLTISAKPKSGATATVEIDLASGTQSLIGLTDSSGIATIQFKVGSQSSGRRND VRASFSTGQTATTSFIIK
Sequences:
>Translated_338_residues MPKRVMLILGLLLGLTLWPRAASAHEVCFPEDQSPHCLSDPFSDYWEANGGLPVFGYPITTVNREQNRETGKVYRTQWME RNRFELHPENTGTPYEVLLGLLGKDRLAQLGRQPDSAESGPKAGCLWFKETGHNVCDQGNGIGFKSYWQANGLKIDGLDA YARSLQLFGLPLTEPKMERNSSGDLVETQWFERARFEWHPNNPNNFKVLLGLLGKEVRGTTPPTTPPTTSPPTTANCTMN APAVAEGAQAWVVYPEIASNTTQTVCVRLTISAKPKSGATATVEIDLASGTQSLIGLTDSSGIATIQFKVGSQSSGRRND VRASFSTGQTATTSFIIK >Mature_337_residues PKRVMLILGLLLGLTLWPRAASAHEVCFPEDQSPHCLSDPFSDYWEANGGLPVFGYPITTVNREQNRETGKVYRTQWMER NRFELHPENTGTPYEVLLGLLGKDRLAQLGRQPDSAESGPKAGCLWFKETGHNVCDQGNGIGFKSYWQANGLKIDGLDAY ARSLQLFGLPLTEPKMERNSSGDLVETQWFERARFEWHPNNPNNFKVLLGLLGKEVRGTTPPTTPPTTSPPTTANCTMNA PAVAEGAQAWVVYPEIASNTTQTVCVRLTISAKPKSGATATVEIDLASGTQSLIGLTDSSGIATIQFKVGSQSSGRRNDV RASFSTGQTATTSFIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36920; Mature: 36789
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRVMLILGLLLGLTLWPRAASAHEVCFPEDQSPHCLSDPFSDYWEANGGLPVFGYPIT CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCEE TVNREQNRETGKVYRTQWMERNRFELHPENTGTPYEVLLGLLGKDRLAQLGRQPDSAESG ECCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCCC PKAGCLWFKETGHNVCDQGNGIGFKSYWQANGLKIDGLDAYARSLQLFGLPLTEPKMERN CCCEEEEEECCCCCHHCCCCCCCCHHHHCCCCEEECCHHHHHHHHEEECCCCCCCHHCCC SSGDLVETQWFERARFEWHPNNPNNFKVLLGLLGKEVRGTTPPTTPPTTSPPTTANCTMN CCCCEEHHHHHHHCCCEECCCCCCCHHHHEEHHHHHHCCCCCCCCCCCCCCCCCCEEEEC APAVAEGAQAWVVYPEIASNTTQTVCVRLTISAKPKSGATATVEIDLASGTQSLIGLTDS CCCCCCCCEEEEEECHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECC SGIATIQFKVGSQSSGRRNDVRASFSTGQTATTSFIIK CCEEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEC >Mature Secondary Structure PKRVMLILGLLLGLTLWPRAASAHEVCFPEDQSPHCLSDPFSDYWEANGGLPVFGYPIT CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCEE TVNREQNRETGKVYRTQWMERNRFELHPENTGTPYEVLLGLLGKDRLAQLGRQPDSAESG ECCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCCC PKAGCLWFKETGHNVCDQGNGIGFKSYWQANGLKIDGLDAYARSLQLFGLPLTEPKMERN CCCEEEEEECCCCCHHCCCCCCCCHHHHCCCCEEECCHHHHHHHHEEECCCCCCCHHCCC SSGDLVETQWFERARFEWHPNNPNNFKVLLGLLGKEVRGTTPPTTPPTTSPPTTANCTMN CCCCEEHHHHHHHCCCEECCCCCCCHHHHEEHHHHHHCCCCCCCCCCCCCCCCCCEEEEC APAVAEGAQAWVVYPEIASNTTQTVCVRLTISAKPKSGATATVEIDLASGTQSLIGLTDS CCCCCCCCEEEEEECHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECC SGIATIQFKVGSQSSGRRNDVRASFSTGQTATTSFIIK CCEEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA