| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901189
Identifier: 159901189
GI number: 159901189
Start: 5975022
End: 5975741
Strand: Direct
Name: 159901189
Synonym: Haur_4677
Alternate gene names: NA
Gene position: 5975022-5975741 (Clockwise)
Preceding gene: 159901187
Following gene: 159901190
Centisome position: 94.15
GC content: 52.08
Gene sequence:
>720_bases ATGAATGTGTCACGACGCGGATTCTTGAAAGGTGTCGGCGGTGGAATTGCGGTCGCAAGTTTTGCATCAATGTTCGGTCT GCATGATGTTTCAGCAGCCGATTACAACGCTCAAGCCCATGATGCCAAAGATACGCCACTGACGATTGTGTCGTTAGCCG CTACCGCTGAACGTCTGGCAATCACCTCGTATTACAACACGATCAAGGGCAATCCATTTGGGCTATCCGAAGCAGAATTA TTGTATTTGAAGTATGCGCTTAGCTCAGAATTGCATCACCTTGAGGTTGTCGAAAGCTTTGGTGGTAAGGCGCTGACCGA TAAGTTCTATGTTCCTGCCAAGTTCTTGAGCGATTTTGGGGTCAACACCAACACCTTTATGGCAGCAGAAACGGCCTTTA CCGGTGCATATTTGGCCGCAACTCGGCGCTTTGCTGAGCTTGGCGAACCACGTATCGCCGCCACAACCGCCCAGCATGCC GCAACCGAAGCCGAACACTTGGCGATCACCCGTGAGCTTGGTGGCTATTTGCCAAATCCAAATACCTTGCCCGCCCCAAT CTACTACAACGTTTCCGATGCAGTACCAACGCTTGGGCCTTTCTTGCAAGGCGGCGCAGGCTTCATCGGCCCAGTCGATT ACCCAGGTGCTGATGCTGTGCGCATGTTGCTTGGCAAAGACATGGCCCTCAAAGTCCCACCATTCACGCAAGTCTTCTAG
Upstream 100 bases:
>100_bases GATTGATACATCCATAATGGGATAGGTTGCGAATATCTCCACAAGAACATCATACATATCATTGATGTTTGAACATATTT CTTGTTAGGAGGGGCAACGT
Downstream 100 bases:
>100_bases TTTGTAACAGTTGCCTGCGATCGTTGAGCCGCTGCGCTCTTTGATCCGCCGTGCGCTTGGTTTCCAGTGAGGCTGGCTGC TGTTACGGTGGCCAGCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNVSRRGFLKGVGGGIAVASFASMFGLHDVSAADYNAQAHDAKDTPLTIVSLAATAERLAITSYYNTIKGNPFGLSEAEL LYLKYALSSELHHLEVVESFGGKALTDKFYVPAKFLSDFGVNTNTFMAAETAFTGAYLAATRRFAELGEPRIAATTAQHA ATEAEHLAITRELGGYLPNPNTLPAPIYYNVSDAVPTLGPFLQGGAGFIGPVDYPGADAVRMLLGKDMALKVPPFTQVF
Sequences:
>Translated_239_residues MNVSRRGFLKGVGGGIAVASFASMFGLHDVSAADYNAQAHDAKDTPLTIVSLAATAERLAITSYYNTIKGNPFGLSEAEL LYLKYALSSELHHLEVVESFGGKALTDKFYVPAKFLSDFGVNTNTFMAAETAFTGAYLAATRRFAELGEPRIAATTAQHA ATEAEHLAITRELGGYLPNPNTLPAPIYYNVSDAVPTLGPFLQGGAGFIGPVDYPGADAVRMLLGKDMALKVPPFTQVF >Mature_239_residues MNVSRRGFLKGVGGGIAVASFASMFGLHDVSAADYNAQAHDAKDTPLTIVSLAATAERLAITSYYNTIKGNPFGLSEAEL LYLKYALSSELHHLEVVESFGGKALTDKFYVPAKFLSDFGVNTNTFMAAETAFTGAYLAATRRFAELGEPRIAATTAQHA ATEAEHLAITRELGGYLPNPNTLPAPIYYNVSDAVPTLGPFLQGGAGFIGPVDYPGADAVRMLLGKDMALKVPPFTQVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25402; Mature: 25402
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSRRGFLKGVGGGIAVASFASMFGLHDVSAADYNAQAHDAKDTPLTIVSLAATAERLA CCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH ITSYYNTIKGNPFGLSEAELLYLKYALSSELHHLEVVESFGGKALTDKFYVPAKFLSDFG HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEECCCEECCHHHHHHCC VNTNTFMAAETAFTGAYLAATRRFAELGEPRIAATTAQHAATEAEHLAITRELGGYLPNP CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCC NTLPAPIYYNVSDAVPTLGPFLQGGAGFIGPVDYPGADAVRMLLGKDMALKVPPFTQVF CCCCCCEEEECHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCHHCCC >Mature Secondary Structure MNVSRRGFLKGVGGGIAVASFASMFGLHDVSAADYNAQAHDAKDTPLTIVSLAATAERLA CCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH ITSYYNTIKGNPFGLSEAELLYLKYALSSELHHLEVVESFGGKALTDKFYVPAKFLSDFG HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEECCCEECCHHHHHHCC VNTNTFMAAETAFTGAYLAATRRFAELGEPRIAATTAQHAATEAEHLAITRELGGYLPNP CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCC NTLPAPIYYNVSDAVPTLGPFLQGGAGFIGPVDYPGADAVRMLLGKDMALKVPPFTQVF CCCCCCEEEECHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA