Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901174

Identifier: 159901174

GI number: 159901174

Start: 5959784

End: 5960470

Strand: Direct

Name: 159901174

Synonym: Haur_4662

Alternate gene names: NA

Gene position: 5959784-5960470 (Clockwise)

Preceding gene: 159901171

Following gene: 159901175

Centisome position: 93.91

GC content: 49.93

Gene sequence:

>687_bases
ATGAAATTGCGATATTCAACAACGATTATTATTTTTGGGTTGTTAACGGCTTGTGGAACGGCTCCAACCAAGGTCGATGA
GCCTTTTCCAACCACTAGTAGTGCAGCCATGGCTACAGCTCAACCAACTATGGATAGCATGATGCAAACTGATGCCCTGA
CGATGACCGATGATATGATGCAACCGACCGATGCGATGTCGATGACCGATGATATGATGCAACCAACCGCAATGCCAACG
GCTGACGATATGATGCAACCAACCGTAATACCAACGGCTGATACGATGATCCAGCCAACCGTTGAGCCAACCACCGAAGC
GCGAGTTGAGCCAACCACCGTGCCAGCCGAACCTGTTGTGTTGGGTTCGGGCAGTTTTCGCGGCATCGATCACAAAAGTG
GCGGGATTGCAACGCTCTATCAGCAGCCCGATGGCAGCAATTTGTTGCGCCTCAGCGATTTCTTCGTTGAAGCAGGGCCA
GATATGTATATTTTTGTCGCTAAGGCAGCCGAAATTAACCAACCCAGCGATTTACAAGCGGGCTACCTTGAATTAGGCAA
ACTCAAAGGCTCCGAGGGCAACCAAAACTACAGCCTGCCTGCCGATTTCGATCCTGCGCTCTATGCCAATGTGGTCATTT
GGTGCGAAAAATATCAAGTCTTGATGGCAGTTGCGCCAATCCAGTAG

Upstream 100 bases:

>100_bases
CTAGGGTGGGTTTGTTTAGGGTTTTGTAAGTTTTTGGCAAGGCTTGGTTAAGTGCTGGCGGTTATAACTAGGCTATGACA
TTTTATGGAGGCTAGCGGCG

Downstream 100 bases:

>100_bases
AATAAAGTCAGAAGGCAAAAGGCAAAAGGCAAAAAGAATATAGGGATCAGGGGGCAGAGGCTAGGGATCAGGCCGATCAG
CATATAGGGCTAATCAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKLRYSTTIIIFGLLTACGTAPTKVDEPFPTTSSAAMATAQPTMDSMMQTDALTMTDDMMQPTDAMSMTDDMMQPTAMPT
ADDMMQPTVIPTADTMIQPTVEPTTEARVEPTTVPAEPVVLGSGSFRGIDHKSGGIATLYQQPDGSNLLRLSDFFVEAGP
DMYIFVAKAAEINQPSDLQAGYLELGKLKGSEGNQNYSLPADFDPALYANVVIWCEKYQVLMAVAPIQ

Sequences:

>Translated_228_residues
MKLRYSTTIIIFGLLTACGTAPTKVDEPFPTTSSAAMATAQPTMDSMMQTDALTMTDDMMQPTDAMSMTDDMMQPTAMPT
ADDMMQPTVIPTADTMIQPTVEPTTEARVEPTTVPAEPVVLGSGSFRGIDHKSGGIATLYQQPDGSNLLRLSDFFVEAGP
DMYIFVAKAAEINQPSDLQAGYLELGKLKGSEGNQNYSLPADFDPALYANVVIWCEKYQVLMAVAPIQ
>Mature_228_residues
MKLRYSTTIIIFGLLTACGTAPTKVDEPFPTTSSAAMATAQPTMDSMMQTDALTMTDDMMQPTDAMSMTDDMMQPTAMPT
ADDMMQPTVIPTADTMIQPTVEPTTEARVEPTTVPAEPVVLGSGSFRGIDHKSGGIATLYQQPDGSNLLRLSDFFVEAGP
DMYIFVAKAAEINQPSDLQAGYLELGKLKGSEGNQNYSLPADFDPALYANVVIWCEKYQVLMAVAPIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24596; Mature: 24596

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
7.9 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRYSTTIIIFGLLTACGTAPTKVDEPFPTTSSAAMATAQPTMDSMMQTDALTMTDDMM
CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCEECHHHC
QPTDAMSMTDDMMQPTAMPTADDMMQPTVIPTADTMIQPTVEPTTEARVEPTTVPAEPVV
CCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEE
LGSGSFRGIDHKSGGIATLYQQPDGSNLLRLSDFFVEAGPDMYIFVAKAAEINQPSDLQA
ECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEHHHCCCCEEEEEEECCCCCCCCCCCC
GYLELGKLKGSEGNQNYSLPADFDPALYANVVIWCEKYQVLMAVAPIQ
CHHHHHEECCCCCCCCCCCCCCCCCHHHEEEEEEEEEEEEEEEEECCC
>Mature Secondary Structure
MKLRYSTTIIIFGLLTACGTAPTKVDEPFPTTSSAAMATAQPTMDSMMQTDALTMTDDMM
CEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCEECHHHC
QPTDAMSMTDDMMQPTAMPTADDMMQPTVIPTADTMIQPTVEPTTEARVEPTTVPAEPVV
CCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEE
LGSGSFRGIDHKSGGIATLYQQPDGSNLLRLSDFFVEAGPDMYIFVAKAAEINQPSDLQA
ECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEHHHCCCCEEEEEEECCCCCCCCCCCC
GYLELGKLKGSEGNQNYSLPADFDPALYANVVIWCEKYQVLMAVAPIQ
CHHHHHEECCCCCCCCCCCCCCCCCHHHEEEEEEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA