| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901120
Identifier: 159901120
GI number: 159901120
Start: 5893374
End: 5893934
Strand: Direct
Name: 159901120
Synonym: Haur_4608
Alternate gene names: NA
Gene position: 5893374-5893934 (Clockwise)
Preceding gene: 159901119
Following gene: 159901121
Centisome position: 92.86
GC content: 47.24
Gene sequence:
>561_bases ATGATTGTTGGACGCTTGCCTGATGTGCCACTCGATGCCGATTTGCCAATAAGCGCGAGCCTGATCTCTCAAGGATTAGA ACATTATCAAGCAGTAGCCCGCTGGATTGCCACGCTACCTTTTGGGCGCAATACCAACCCACTCGATTGGCGCTTGGTCT TGAGCGAAAAACGTGGTACCAGCAGCACCAAACATGCCTTCTTGGCCGAGTTGGCCCGCGAATTAGCCTTGCCAATTAAT TTATATTTCGGGATTTATCTAATGGATGGCAAGAATACGCCAGGTGTGGGTGAAACTCTTGCTTCGAATAATTTACCCTC GATTCCTGAAGCCCATTGTTTTTTACGCTATGGCCGTTGGAACATTGATGTAACGCGCTCACCAAAGGCTGAGCCAATTT TGCAATTTTTTGAAGAGCAACAGATTAATTCTGAGCAAATTGGCGATTTCAAACGAACTGTTCATCGTAATTTTCTCTTG AAATGGGCTACCAGCCAAGGGCTAAGCCTCACCAAAGCCTGGGCGATTCGCGAGGCCTGTATGGCTGCATTAAGCCAATG A
Upstream 100 bases:
>100_bases AAGGGCTTGGCTACTACCGCTGGGGGCGGGTTCGCCAACAACAACTTTGCGATCGTGAAGCAAGTCCGGTTATCGCCACA TATTCAATGGAGATGATGTC
Downstream 100 bases:
>100_bases GCGCCTGCTTGCCGTCAAATTTTGCTTGGCCTCAAACCAGCCAGCAATTTGGCGGGTTAAGGGTGCTTATGCCCCAACCA AGCCCCAGTCAGATGTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MIVGRLPDVPLDADLPISASLISQGLEHYQAVARWIATLPFGRNTNPLDWRLVLSEKRGTSSTKHAFLAELARELALPIN LYFGIYLMDGKNTPGVGETLASNNLPSIPEAHCFLRYGRWNIDVTRSPKAEPILQFFEEQQINSEQIGDFKRTVHRNFLL KWATSQGLSLTKAWAIREACMAALSQ
Sequences:
>Translated_186_residues MIVGRLPDVPLDADLPISASLISQGLEHYQAVARWIATLPFGRNTNPLDWRLVLSEKRGTSSTKHAFLAELARELALPIN LYFGIYLMDGKNTPGVGETLASNNLPSIPEAHCFLRYGRWNIDVTRSPKAEPILQFFEEQQINSEQIGDFKRTVHRNFLL KWATSQGLSLTKAWAIREACMAALSQ >Mature_186_residues MIVGRLPDVPLDADLPISASLISQGLEHYQAVARWIATLPFGRNTNPLDWRLVLSEKRGTSSTKHAFLAELARELALPIN LYFGIYLMDGKNTPGVGETLASNNLPSIPEAHCFLRYGRWNIDVTRSPKAEPILQFFEEQQINSEQIGDFKRTVHRNFLL KWATSQGLSLTKAWAIREACMAALSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20863; Mature: 20863
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVGRLPDVPLDADLPISASLISQGLEHYQAVARWIATLPFGRNTNPLDWRLVLSEKRGT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC SSTKHAFLAELARELALPINLYFGIYLMDGKNTPGVGETLASNNLPSIPEAHCFLRYGRW CHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCHHHEEEECCE NIDVTRSPKAEPILQFFEEQQINSEQIGDFKRTVHRNFLLKWATSQGLSLTKAWAIREAC EEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH MAALSQ HHHHCC >Mature Secondary Structure MIVGRLPDVPLDADLPISASLISQGLEHYQAVARWIATLPFGRNTNPLDWRLVLSEKRGT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC SSTKHAFLAELARELALPINLYFGIYLMDGKNTPGVGETLASNNLPSIPEAHCFLRYGRW CHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCHHHEEEECCE NIDVTRSPKAEPILQFFEEQQINSEQIGDFKRTVHRNFLLKWATSQGLSLTKAWAIREAC EEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH MAALSQ HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA