| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is ybaZ [C]
Identifier: 159900850
GI number: 159900850
Start: 5545178
End: 5545510
Strand: Reverse
Name: ybaZ [C]
Synonym: Haur_4337
Alternate gene names: 159900850
Gene position: 5545510-5545178 (Counterclockwise)
Preceding gene: 159900851
Following gene: 159900847
Centisome position: 87.38
GC content: 51.35
Gene sequence:
>333_bases ATGAGCAACGAATTTTTGACGGCGATTTATCAAACACTCAAGCAAGTGCCAGCAGGCCGGATTGTAAATTACGGGCGGTT GGCTTTGGCAGCGGGCTACCCTGGCTATGCACGAGCAGTGGGCAAAGCTTTGCATGCCTTAGATGAGCAATATCCTGATG TGGCTTGGTGGCGGGTGGTCAATCGCGAGGGCCGAATTTCGACCAATTGTCCAGTACATACGGCAATCGAACAACGCCAA CGCTTAGAAGCCGAGGGGATTGAGTTTGATCAGCGTGGCTATATTAGCTGGCAACGCTTTGGTTGGCTCGAAACTAGCGA ACTGGAGTTTTGA
Upstream 100 bases:
>100_bases GTGTGCTTCGTGTCCTTCGTGGATCAATCTTAACCCTGACCCTTCGTTCGTGCTATTTTGTGCTAAAGTGCTGATAGCAG ATCTATCAGTGAGCAGGTCG
Downstream 100 bases:
>100_bases ATTCCCTCGTTCCCTTTCTTTCAAGGGTAGACTTTTAACGATGATTGGTTGGGATTTGGTATCGATTGGCATGCCCTCAC CCCCTAGCCCCCTCTCCCGC
Product: DNA binding methylated-DNA-(protein)-cysteine S-methyltransferase
Products: NA
Alternate protein names: O6-Methylguanine-DNA Methyltransferase; Methylated-DNA-(Protein)-Cysteine S-Methyltransferase; Methyltransferase; MGMT Family Protein; Methylated DNA-Protein Cysteine Methyltransferase; Methylated-DNA-[Protein]-Cysteine S-Methyltransferase; 6-O-Methylguanine DNA Methyltransferase; Methylated-DNA/Protein-Cysteinemethyltransferase; Methylated DNA-Proteincysteine Methyltransferase; Methylated-DNA Methyltransferase
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSNEFLTAIYQTLKQVPAGRIVNYGRLALAAGYPGYARAVGKALHALDEQYPDVAWWRVVNREGRISTNCPVHTAIEQRQ RLEAEGIEFDQRGYISWQRFGWLETSELEF
Sequences:
>Translated_110_residues MSNEFLTAIYQTLKQVPAGRIVNYGRLALAAGYPGYARAVGKALHALDEQYPDVAWWRVVNREGRISTNCPVHTAIEQRQ RLEAEGIEFDQRGYISWQRFGWLETSELEF >Mature_109_residues SNEFLTAIYQTLKQVPAGRIVNYGRLALAAGYPGYARAVGKALHALDEQYPDVAWWRVVNREGRISTNCPVHTAIEQRQR LEAEGIEFDQRGYISWQRFGWLETSELEF
Specific function: Unknown
COG id: COG3695
COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786659, Length=100, Percent_Identity=39, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12647; Mature: 12516
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNEFLTAIYQTLKQVPAGRIVNYGRLALAAGYPGYARAVGKALHALDEQYPDVAWWRVV CCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHEE NREGRISTNCPVHTAIEQRQRLEAEGIEFDQRGYISWQRFGWLETSELEF CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure SNEFLTAIYQTLKQVPAGRIVNYGRLALAAGYPGYARAVGKALHALDEQYPDVAWWRVV CCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHEE NREGRISTNCPVHTAIEQRQRLEAEGIEFDQRGYISWQRFGWLETSELEF CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA