Click here to switch to the map view.

The map label for this gene is yicI [C]

Identifier: 159900847

GI number: 159900847

Start: 5534064

End: 5535914

Strand: Reverse

Name: yicI [C]

Synonym: Haur_4334

Alternate gene names: 159900847

Gene position: 5535914-5534064 (Counterclockwise)

Preceding gene: 159900850

Following gene: 159900846

Centisome position: 87.23

GC content: 50.84

Gene sequence:

>1851_bases
ATGGCATACACCCTCGAATCAACAGGCTTATTGGTATTTCAACGTGATGACGAAGAAGTTTTGACGATTCAGCCCTACTT
GCAGGCTTATGGCTCGCAGTTTGCCGCATTAGGTGTACAAACCAAGCCTGATACGGTGCAATACACTAGTTTCGATAACC
AGACCTTTGAGCTTAATCTTGAAACGACGGCAACCGGCTATCAGTTGGTGTTTCACGTGAAACATCAGGTTGCTCAAATT
GGTTTAGCAATCGGCGTACAACCAGCAGGCTCGTGGTATGGTATGGGCGAACGGGTGATTCAAAGTTGGCCGCTCAACTT
GGCTGGTGTGCAAAGCCAACCATTTATGACCTATGATCACGCCAATGATGGCACACTCAATATTGTTACGCCAGCCTGGA
TTGGCGCGAATGGCGTGGCTTTTATCGTGGCCGAAGATACAGGCCCGTTGCATGTCACAATCGATAGCGATCCAGCAGGT
GTGATTCGGCTGGTGCAGTTTCCTTCGCCAACCCCATTTGGCGCGGGCTTGGATGGCAGCGAAACCCATTATGAAGGCAC
GCGCTTGGTGCTCGATCTACTGATTGCTGAAAATGTCAGCGTTGCCGCTCAACACGTCATTCAACAATTGGGCTACCCCA
AGGCGGCTCCACCCTTGGCAATGTTTAGCAAGCCAATTTGGACAACCTGGGCACGCTATAAAATGGATATCGATCAAGCT
CAAACGCTGGCGTTTGCCCAAGAAATTATCGACCAACAGTATCCATATTCGGTGCTAGAGATCGACGATCGCTGGCAAAC
TGCTTATGGCGATTTAGAATTCGATCGGCGCAAGTTTCCCGATCCCAAGGCTATGGTCGATCAATTGCATCAGCTTGGCT
ATAAAGTAACCTTGTGGATTCCACCATTTTTCGATCCAAAGAGCGCGGCTTTTGCTGAAGCTACTGCTAATGGCTATTTG
GTCAAACATCCCGCCAACGATCAACCGTATTTGACCCGTTGGTGGCAAGGTTGGGGCGGTTTGTTGGATGTCTCGAATCC
TGCTGCCTTGGCTTGGTGGCAAGCAGGTTTGGAGCGCTTGCAAACCTTGTATGGCATCGATGGTTTTAAATTTGACGGCG
CTGAAGGGAATTTTCTACCCGCCGAAGCCAAAACCCATCTGCCGATGACTCCCAACCAATATAGTGATCGCTATGTGGCT
TTTGTGGCCAAATCGTGGCAATGGACAGAGGTACGAACTGGTTGGCGCTCGCAACAGCAACCAATCTTCTTCCGCGAATG
GGACAAATGGAGTCGTTGGGGCATGGACAATGGCTTGCATGCGGTCGTTACCCAAGCGCTTGCGATGAGCGTGATCGGTT
ATCCCTATGTGCTGCCCGATATGATCGGCGGCAACGCCTATAACGGTGAATTTCCCGAGCGCGAGTTGCTGATTCGTTGG
ACGCAAGTCACGGCATTATTGCCAGCGATGCAATTTTCAATCGCGCCATGGCAGTACGATGTAGAAACCAGCCAGATTTG
CCAGCGCTATGCTCAATTGCACGCTGAGCTAGAGCCATACATTGCCGAATTGGTGCAAGCGACCATCACCGATGGTACGC
CTTTAGTTCGGCCTTTGTGGTGGCACTATCCCGACGATGCCAGCACGCGCTTTATTGGTGATCAATGGTTGTTTGGCGAG
CAATACTTGGTTGCGCCAATGCTCCAAGCCAACCACTACCAACGTGACATTTATTTGCCTGAAGGTGGCTGGCGCGATTA
TTGGACTGGCGAGAAATTCGAGGGTGAAACCTGGCTCTACAATTATCCTGCGCCCTTAGAAACCCTGCCGTTGTTCGAGC
GGCTGTGGTAG

Upstream 100 bases:

>100_bases
ACATCTATGTTCTATGTTCTATATTCTATGTTCTATGTTCTATGTTCTTCATCCCCAACTATAATAGCTGGTAACATATT
GATCGTTACGTGAGGCGTTT

Downstream 100 bases:

>100_bases
AATTTTAGCGAGTAGTTGTATTTTGGTGTGCAAGGAGATTATTTCATGGCCAACACAACCATCACTTGGCTTGGTCACGC
CAGCTTTTTATTTGTCACGC

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Alpha-glucosidase II [H]

Number of amino acids: Translated: 616; Mature: 615

Protein sequence:

>616_residues
MAYTLESTGLLVFQRDDEEVLTIQPYLQAYGSQFAALGVQTKPDTVQYTSFDNQTFELNLETTATGYQLVFHVKHQVAQI
GLAIGVQPAGSWYGMGERVIQSWPLNLAGVQSQPFMTYDHANDGTLNIVTPAWIGANGVAFIVAEDTGPLHVTIDSDPAG
VIRLVQFPSPTPFGAGLDGSETHYEGTRLVLDLLIAENVSVAAQHVIQQLGYPKAAPPLAMFSKPIWTTWARYKMDIDQA
QTLAFAQEIIDQQYPYSVLEIDDRWQTAYGDLEFDRRKFPDPKAMVDQLHQLGYKVTLWIPPFFDPKSAAFAEATANGYL
VKHPANDQPYLTRWWQGWGGLLDVSNPAALAWWQAGLERLQTLYGIDGFKFDGAEGNFLPAEAKTHLPMTPNQYSDRYVA
FVAKSWQWTEVRTGWRSQQQPIFFREWDKWSRWGMDNGLHAVVTQALAMSVIGYPYVLPDMIGGNAYNGEFPERELLIRW
TQVTALLPAMQFSIAPWQYDVETSQICQRYAQLHAELEPYIAELVQATITDGTPLVRPLWWHYPDDASTRFIGDQWLFGE
QYLVAPMLQANHYQRDIYLPEGGWRDYWTGEKFEGETWLYNYPAPLETLPLFERLW

Sequences:

>Translated_616_residues
MAYTLESTGLLVFQRDDEEVLTIQPYLQAYGSQFAALGVQTKPDTVQYTSFDNQTFELNLETTATGYQLVFHVKHQVAQI
GLAIGVQPAGSWYGMGERVIQSWPLNLAGVQSQPFMTYDHANDGTLNIVTPAWIGANGVAFIVAEDTGPLHVTIDSDPAG
VIRLVQFPSPTPFGAGLDGSETHYEGTRLVLDLLIAENVSVAAQHVIQQLGYPKAAPPLAMFSKPIWTTWARYKMDIDQA
QTLAFAQEIIDQQYPYSVLEIDDRWQTAYGDLEFDRRKFPDPKAMVDQLHQLGYKVTLWIPPFFDPKSAAFAEATANGYL
VKHPANDQPYLTRWWQGWGGLLDVSNPAALAWWQAGLERLQTLYGIDGFKFDGAEGNFLPAEAKTHLPMTPNQYSDRYVA
FVAKSWQWTEVRTGWRSQQQPIFFREWDKWSRWGMDNGLHAVVTQALAMSVIGYPYVLPDMIGGNAYNGEFPERELLIRW
TQVTALLPAMQFSIAPWQYDVETSQICQRYAQLHAELEPYIAELVQATITDGTPLVRPLWWHYPDDASTRFIGDQWLFGE
QYLVAPMLQANHYQRDIYLPEGGWRDYWTGEKFEGETWLYNYPAPLETLPLFERLW
>Mature_615_residues
AYTLESTGLLVFQRDDEEVLTIQPYLQAYGSQFAALGVQTKPDTVQYTSFDNQTFELNLETTATGYQLVFHVKHQVAQIG
LAIGVQPAGSWYGMGERVIQSWPLNLAGVQSQPFMTYDHANDGTLNIVTPAWIGANGVAFIVAEDTGPLHVTIDSDPAGV
IRLVQFPSPTPFGAGLDGSETHYEGTRLVLDLLIAENVSVAAQHVIQQLGYPKAAPPLAMFSKPIWTTWARYKMDIDQAQ
TLAFAQEIIDQQYPYSVLEIDDRWQTAYGDLEFDRRKFPDPKAMVDQLHQLGYKVTLWIPPFFDPKSAAFAEATANGYLV
KHPANDQPYLTRWWQGWGGLLDVSNPAALAWWQAGLERLQTLYGIDGFKFDGAEGNFLPAEAKTHLPMTPNQYSDRYVAF
VAKSWQWTEVRTGWRSQQQPIFFREWDKWSRWGMDNGLHAVVTQALAMSVIGYPYVLPDMIGGNAYNGEFPERELLIRWT
QVTALLPAMQFSIAPWQYDVETSQICQRYAQLHAELEPYIAELVQATITDGTPLVRPLWWHYPDDASTRFIGDQWLFGEQ
YLVAPMLQANHYQRDIYLPEGGWRDYWTGEKFEGETWLYNYPAPLETLPLFERLW

Specific function: Unknown

COG id: COG1501

COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 31 family [H]

Homologues:

Organism=Homo sapiens, GI153791946, Length=536, Percent_Identity=38.0597014925373, Blast_Score=359, Evalue=4e-99,
Organism=Homo sapiens, GI119393895, Length=404, Percent_Identity=24.7524752475248, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI119393893, Length=404, Percent_Identity=24.7524752475248, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI119393891, Length=404, Percent_Identity=24.7524752475248, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI88900491, Length=424, Percent_Identity=25, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI38202257, Length=424, Percent_Identity=25, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI66346737, Length=395, Percent_Identity=23.7974683544304, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI221316699, Length=183, Percent_Identity=28.4153005464481, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI310115361, Length=183, Percent_Identity=28.4153005464481, Blast_Score=74, Evalue=5e-13,
Organism=Escherichia coli, GI2367256, Length=417, Percent_Identity=25.8992805755396, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI2367323, Length=362, Percent_Identity=28.1767955801105, Blast_Score=136, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI71991189, Length=416, Percent_Identity=24.7596153846154, Blast_Score=90, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17560798, Length=422, Percent_Identity=21.8009478672986, Blast_Score=86, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17560800, Length=422, Percent_Identity=21.8009478672986, Blast_Score=86, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24650054, Length=613, Percent_Identity=33.605220228385, Blast_Score=324, Evalue=1e-88,
Organism=Drosophila melanogaster, GI28571440, Length=559, Percent_Identity=28.0858676207513, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI28571438, Length=559, Percent_Identity=28.0858676207513, Blast_Score=202, Evalue=6e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011013
- InterPro:   IPR000322
- InterPro:   IPR017853 [H]

Pfam domain/function: PF01055 Glyco_hydro_31 [H]

EC number: =3.2.1.20 [H]

Molecular weight: Translated: 70073; Mature: 69941

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYTLESTGLLVFQRDDEEVLTIQPYLQAYGSQFAALGVQTKPDTVQYTSFDNQTFELNL
CEEEEECCCEEEEEECCCCEEEEEHHHHHCCCCEEEEECCCCCCEEEEEECCCEEEEEEE
ETTATGYQLVFHVKHQVAQIGLAIGVQPAGSWYGMGERVIQSWPLNLAGVQSQPFMTYDH
EECCCCEEEEHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHCCCCEECCCCCCEEEEEC
ANDGTLNIVTPAWIGANGVAFIVAEDTGPLHVTIDSDPAGVIRLVQFPSPTPFGAGLDGS
CCCCEEEEEECCEECCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCC
ETHYEGTRLVLDLLIAENVSVAAQHVIQQLGYPKAAPPLAMFSKPIWTTWARYKMDIDQA
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHEEECHHHH
QTLAFAQEIIDQQYPYSVLEIDDRWQTAYGDLEFDRRKFPDPKAMVDQLHQLGYKVTLWI
HHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCEEEEEE
PPFFDPKSAAFAEATANGYLVKHPANDQPYLTRWWQGWGGLLDVSNPAALAWWQAGLERL
CCCCCCCCCHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHH
QTLYGIDGFKFDGAEGNFLPAEAKTHLPMTPNQYSDRYVAFVAKSWQWTEVRTGWRSQQQ
HHHHCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHCCCCCCCC
PIFFREWDKWSRWGMDNGLHAVVTQALAMSVIGYPYVLPDMIGGNAYNGEFPERELLIRW
CEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHEEEH
TQVTALLPAMQFSIAPWQYDVETSQICQRYAQLHAELEPYIAELVQATITDGTPLVRPLW
HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
WHYPDDASTRFIGDQWLFGEQYLVAPMLQANHYQRDIYLPEGGWRDYWTGEKFEGETWLY
EECCCCCCCEEECCEEECCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEEE
NYPAPLETLPLFERLW
ECCCCCHHHHHHHHCC
>Mature Secondary Structure 
AYTLESTGLLVFQRDDEEVLTIQPYLQAYGSQFAALGVQTKPDTVQYTSFDNQTFELNL
EEEEECCCEEEEEECCCCEEEEEHHHHHCCCCEEEEECCCCCCEEEEEECCCEEEEEEE
ETTATGYQLVFHVKHQVAQIGLAIGVQPAGSWYGMGERVIQSWPLNLAGVQSQPFMTYDH
EECCCCEEEEHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHCCCCEECCCCCCEEEEEC
ANDGTLNIVTPAWIGANGVAFIVAEDTGPLHVTIDSDPAGVIRLVQFPSPTPFGAGLDGS
CCCCEEEEEECCEECCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCC
ETHYEGTRLVLDLLIAENVSVAAQHVIQQLGYPKAAPPLAMFSKPIWTTWARYKMDIDQA
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHEEECHHHH
QTLAFAQEIIDQQYPYSVLEIDDRWQTAYGDLEFDRRKFPDPKAMVDQLHQLGYKVTLWI
HHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCEEEEEE
PPFFDPKSAAFAEATANGYLVKHPANDQPYLTRWWQGWGGLLDVSNPAALAWWQAGLERL
CCCCCCCCCHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHH
QTLYGIDGFKFDGAEGNFLPAEAKTHLPMTPNQYSDRYVAFVAKSWQWTEVRTGWRSQQQ
HHHHCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHCCCCCCCC
PIFFREWDKWSRWGMDNGLHAVVTQALAMSVIGYPYVLPDMIGGNAYNGEFPERELLIRW
CEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHEEEH
TQVTALLPAMQFSIAPWQYDVETSQICQRYAQLHAELEPYIAELVQATITDGTPLVRPLW
HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
WHYPDDASTRFIGDQWLFGEQYLVAPMLQANHYQRDIYLPEGGWRDYWTGEKFEGETWLY
EECCCCCCCEEECCEEECCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEEE
NYPAPLETLPLFERLW
ECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10945254 [H]