| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900837
Identifier: 159900837
GI number: 159900837
Start: 5522286
End: 5523272
Strand: Direct
Name: 159900837
Synonym: Haur_4324
Alternate gene names: NA
Gene position: 5522286-5523272 (Clockwise)
Preceding gene: 159900836
Following gene: 159900841
Centisome position: 87.01
GC content: 53.19
Gene sequence:
>987_bases ATGAGCGAGCCTGCCGTGGAATTGTTGTTGGCGGCATGGTCAAGCCAACCAGCCGCCAACTTAACGCAATTATGTGCTGC ATGTAGTCCAAACGACTGGAAAGTGCTGGCTCATCTAGCCGATTATCATGAAGTTGAGGGCTTGCTCTGGTCAGTTTTGC GCCACCAAGCCCTGCCTGCAACCCTCGCCGAACATTGGCGCGAACGCTATTACCTCGCGGCGCTACGCAACGATCTGCGG CTTGAAGAATTTCAGCGAATTCAGCAATTGCTCAACGCCGAATCAATCGAAGTCGCCTTGCTCAAAGGCATGGCCTTTGC TCCAACAATCTATCGCTCACTTGGCCAACGCCAAATGGGCGATATTGATTTGTTGGTTCAGCGGGCTGATTTGCAACGAG CCTGTGCGGTGTTATTTGCGGCGGGCTATGGCCTGAGCCAATACACGGTGCAAACATGGCCACAACAGCGTCGTAGCGGT GGCGAAGTTCGCTTGCAAACGCCTAGCGGCGCAACGTTAGAATTGCATTGGTGGCTGTTTGCGGGGCTGTGGTCGCGTTG GGCTGGCTTGCATACCTATCCAGCTTGGCAACTTCGGCAAGCGCACTATCAAACATTCACCTTGCCAGTGTTGGAGCCAA TCAGTCAGCTGTTGCATACTGCTCATCATCTGGCGATTGGCAATCAATATGGGGCTGGAATTGGCCGTATGCTAGCAGAT ATTGATCGTTTGATTACAGCCTATGCCTTTGATTGGCAACAAGTTTGGCACGAAGCGCAACGTTGGGGTTTGGCGCATAT GCTTTGGGGCGGGTTGCGTTTGGCTGAGCAATGGTTTAATTCAGCCATTGAATGGCATTGGCAGCCACGTACTTGGCGCA GAGCCTTGCTCGAACGCTGCTTGCCAAGCCAAAAACTCTTGCTTGGGGCCGATCCACGGTTGCGGCGTAGGTGGCGTTAT GCAATTTTAGCCAGCGCTTTGGATTGA
Upstream 100 bases:
>100_bases ACCCAGCCTATAACAACCACAAATTCCTGACGAATGTTGATAATGCGCCGTTGATTCGGCTAGAAACGCCATGGGCCAAC AAACGTGAGTCGATCAAGCA
Downstream 100 bases:
>100_bases GTTCGAGCATAATCTAAGCCTTCTTGCAGGGTCGCGGCACTTGTAACACTGCCTAATTGCAAGTTGCCGCTGGCTAAACT GGCAGCAACATCAGGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSEPAVELLLAAWSSQPAANLTQLCAACSPNDWKVLAHLADYHEVEGLLWSVLRHQALPATLAEHWRERYYLAALRNDLR LEEFQRIQQLLNAESIEVALLKGMAFAPTIYRSLGQRQMGDIDLLVQRADLQRACAVLFAAGYGLSQYTVQTWPQQRRSG GEVRLQTPSGATLELHWWLFAGLWSRWAGLHTYPAWQLRQAHYQTFTLPVLEPISQLLHTAHHLAIGNQYGAGIGRMLAD IDRLITAYAFDWQQVWHEAQRWGLAHMLWGGLRLAEQWFNSAIEWHWQPRTWRRALLERCLPSQKLLLGADPRLRRRWRY AILASALD
Sequences:
>Translated_328_residues MSEPAVELLLAAWSSQPAANLTQLCAACSPNDWKVLAHLADYHEVEGLLWSVLRHQALPATLAEHWRERYYLAALRNDLR LEEFQRIQQLLNAESIEVALLKGMAFAPTIYRSLGQRQMGDIDLLVQRADLQRACAVLFAAGYGLSQYTVQTWPQQRRSG GEVRLQTPSGATLELHWWLFAGLWSRWAGLHTYPAWQLRQAHYQTFTLPVLEPISQLLHTAHHLAIGNQYGAGIGRMLAD IDRLITAYAFDWQQVWHEAQRWGLAHMLWGGLRLAEQWFNSAIEWHWQPRTWRRALLERCLPSQKLLLGADPRLRRRWRY AILASALD >Mature_327_residues SEPAVELLLAAWSSQPAANLTQLCAACSPNDWKVLAHLADYHEVEGLLWSVLRHQALPATLAEHWRERYYLAALRNDLRL EEFQRIQQLLNAESIEVALLKGMAFAPTIYRSLGQRQMGDIDLLVQRADLQRACAVLFAAGYGLSQYTVQTWPQQRRSGG EVRLQTPSGATLELHWWLFAGLWSRWAGLHTYPAWQLRQAHYQTFTLPVLEPISQLLHTAHHLAIGNQYGAGIGRMLADI DRLITAYAFDWQQVWHEAQRWGLAHMLWGGLRLAEQWFNSAIEWHWQPRTWRRALLERCLPSQKLLLGADPRLRRRWRYA ILASALD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37824; Mature: 37693
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPAVELLLAAWSSQPAANLTQLCAACSPNDWKVLAHLADYHEVEGLLWSVLRHQALPA CCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH TLAEHWRERYYLAALRNDLRLEEFQRIQQLLNAESIEVALLKGMAFAPTIYRSLGQRQMG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCC DIDLLVQRADLQRACAVLFAAGYGLSQYTVQTWPQQRRSGGEVRLQTPSGATLELHWWLF CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHCCCCCEEEECCCCCEEEEHHHHH AGLWSRWAGLHTYPAWQLRQAHYQTFTLPVLEPISQLLHTAHHLAIGNQYGAGIGRMLAD HHHHHHHCCCCCCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHH IDRLITAYAFDWQQVWHEAQRWGLAHMLWGGLRLAEQWFNSAIEWHWQPRTWRRALLERC HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC LPSQKLLLGADPRLRRRWRYAILASALD CCCCCEEECCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEPAVELLLAAWSSQPAANLTQLCAACSPNDWKVLAHLADYHEVEGLLWSVLRHQALPA CCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH TLAEHWRERYYLAALRNDLRLEEFQRIQQLLNAESIEVALLKGMAFAPTIYRSLGQRQMG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCC DIDLLVQRADLQRACAVLFAAGYGLSQYTVQTWPQQRRSGGEVRLQTPSGATLELHWWLF CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHCCCCCEEEECCCCCEEEEHHHHH AGLWSRWAGLHTYPAWQLRQAHYQTFTLPVLEPISQLLHTAHHLAIGNQYGAGIGRMLAD HHHHHHHCCCCCCCHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHH IDRLITAYAFDWQQVWHEAQRWGLAHMLWGGLRLAEQWFNSAIEWHWQPRTWRRALLERC HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC LPSQKLLLGADPRLRRRWRYAILASALD CCCCCEEECCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA