Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900722

Identifier: 159900722

GI number: 159900722

Start: 5363041

End: 5363814

Strand: Direct

Name: 159900722

Synonym: Haur_4209

Alternate gene names: NA

Gene position: 5363041-5363814 (Clockwise)

Preceding gene: 159900717

Following gene: 159900730

Centisome position: 84.5

GC content: 49.74

Gene sequence:

>774_bases
ATGAACAGCAAGGTTTTGCGCTTTGCCAATGTGGCAGCGATTATCGCGACGATTGTGATCAACGCCTTAGCCAATATTTT
GCCGATCAACGGGCTTGATACTGGCACGATCTCCGATTCGTTTCCAGTGCGTTTCGTGCCAGCGGGCTATGTTTTCAGCA
TTTGGGGCTTAATTTATTTGGGCCTTAGCGCCTTCGCAGTTTATCAAGCATTGCCTAAGCAGGCCAATAATCCAGCCATT
GCTAAAATTGGCTGGTGGTTCGTGGCCTCATGTGGCTTCAATAGCGCTTGGATTTTCGCTTGGCACTATTTGCAATTCCC
ACTCACAATCGTGTTAATTATTGGTTTGTTAGTTTCGCTGATTATGATTTATCGCCAGTTGAGCAGCGTTCGTGCTGAAG
CTAGCACCGCTGATCGTTGGCTGATTCATACGCCGTTTTCCATTTACTTGGGTTGGGCTACGGTGGCAACCATCGCCAAT
GCCACGATTGTGCTCTACGATGCTGGTTGGCGCGGCGGCCCACTCAGCGATTCAGTTTGGACGGTGATTTTGTTGGTAAT
TGGGGTTTGTTTGGCAGCCTTCATTACCCTGCGCCAACGCGATATTGCCTATAATGGCGTGCTGTTGTGGGCGTTCATCG
GCATTGCAGTTAAACAAGCAGCCTTCCCATTAGTGATGAATGCAGCAATTGTCGCGGCAGTTGCGATTGCCTTGTTGATT
GGGCTGGCGCTCATTCGTAGCTTGCCAACGCAACGACGCAAAGCTATGGCGTAG

Upstream 100 bases:

>100_bases
TACTCCACTCGGCGGGGGATGCCAATATCCATCCATTGGTCCGATCTTTGCGTTAAACCAATCAGAGCAAGCAGAATTTC
AGTCAAATAAGGAGTCTCTG

Downstream 100 bases:

>100_bases
CTGAAACCACAAAGAACACCAAGAGCACGAAGAAATCTTTGACATTGATTTTTCGTGCTCTTGGCGTTCTTAGCGGTTAC
TAACTTTTTGGTAGATCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNSKVLRFANVAAIIATIVINALANILPINGLDTGTISDSFPVRFVPAGYVFSIWGLIYLGLSAFAVYQALPKQANNPAI
AKIGWWFVASCGFNSAWIFAWHYLQFPLTIVLIIGLLVSLIMIYRQLSSVRAEASTADRWLIHTPFSIYLGWATVATIAN
ATIVLYDAGWRGGPLSDSVWTVILLVIGVCLAAFITLRQRDIAYNGVLLWAFIGIAVKQAAFPLVMNAAIVAAVAIALLI
GLALIRSLPTQRRKAMA

Sequences:

>Translated_257_residues
MNSKVLRFANVAAIIATIVINALANILPINGLDTGTISDSFPVRFVPAGYVFSIWGLIYLGLSAFAVYQALPKQANNPAI
AKIGWWFVASCGFNSAWIFAWHYLQFPLTIVLIIGLLVSLIMIYRQLSSVRAEASTADRWLIHTPFSIYLGWATVATIAN
ATIVLYDAGWRGGPLSDSVWTVILLVIGVCLAAFITLRQRDIAYNGVLLWAFIGIAVKQAAFPLVMNAAIVAAVAIALLI
GLALIRSLPTQRRKAMA
>Mature_257_residues
MNSKVLRFANVAAIIATIVINALANILPINGLDTGTISDSFPVRFVPAGYVFSIWGLIYLGLSAFAVYQALPKQANNPAI
AKIGWWFVASCGFNSAWIFAWHYLQFPLTIVLIIGLLVSLIMIYRQLSSVRAEASTADRWLIHTPFSIYLGWATVATIAN
ATIVLYDAGWRGGPLSDSVWTVILLVIGVCLAAFITLRQRDIAYNGVLLWAFIGIAVKQAAFPLVMNAAIVAAVAIALLI
GLALIRSLPTQRRKAMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27878; Mature: 27878

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKVLRFANVAAIIATIVINALANILPINGLDTGTISDSFPVRFVPAGYVFSIWGLIYL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHH
GLSAFAVYQALPKQANNPAIAKIGWWFVASCGFNSAWIFAWHYLQFPLTIVLIIGLLVSL
HHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IMIYRQLSSVRAEASTADRWLIHTPFSIYLGWATVATIANATIVLYDAGWRGGPLSDSVW
HHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHH
TVILLVIGVCLAAFITLRQRDIAYNGVLLWAFIGIAVKQAAFPLVMNAAIVAAVAIALLI
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLALIRSLPTQRRKAMA
HHHHHHHCCHHHHHCCC
>Mature Secondary Structure
MNSKVLRFANVAAIIATIVINALANILPINGLDTGTISDSFPVRFVPAGYVFSIWGLIYL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHH
GLSAFAVYQALPKQANNPAIAKIGWWFVASCGFNSAWIFAWHYLQFPLTIVLIIGLLVSL
HHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IMIYRQLSSVRAEASTADRWLIHTPFSIYLGWATVATIANATIVLYDAGWRGGPLSDSVW
HHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHH
TVILLVIGVCLAAFITLRQRDIAYNGVLLWAFIGIAVKQAAFPLVMNAAIVAAVAIALLI
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLALIRSLPTQRRKAMA
HHHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA