Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900643

Identifier: 159900643

GI number: 159900643

Start: 5276589

End: 5276993

Strand: Reverse

Name: 159900643

Synonym: Haur_4130

Alternate gene names: NA

Gene position: 5276993-5276589 (Counterclockwise)

Preceding gene: 159900644

Following gene: 159900642

Centisome position: 83.15

GC content: 49.38

Gene sequence:

>405_bases
GTGTTTTGGCATATTATCAAAAATGCCAGAAATCCCAATCGCTACCAATCGAATGTGTATTCGAATCGTCGGCATAATCG
CCGACATCATGCTTCGTTTCATCAGCGCCATATGCACCCGTCATTGCATCAGCATCCATCGTTGCAGCATCACCAGCAGC
ATCACTTTGATTCCGATGATCTCGCGGCTGGGATTGGTATCGCAGCAGGCATGCACGTTGCTCAATCATGGGACTCCAAT
AATTCAGGTTGGGATAGTTCATCCAGCTTTGATAGCGGTTCCTGGTCGAACAACGATTCTGGTAGCTCATGGTCAAGCGG
CGATTCGGGCGGCTCATGGTCAAGCGATTCGAGTAGTTCGTCTAGCTCGGATAGTTTCAGCGGCGATTCAAGCGGTTCTT
GGTAA

Upstream 100 bases:

>100_bases
CAAGGAGAGAAATTCGATGGACTCATTTGAAATAGTATCAACGATCATGTCGATCTTTACACTAGTGTTTTTTCTTTTCG
TATTTTCGATATTTGGCTTT

Downstream 100 bases:

>100_bases
TACGCGATGAATGGATTTATGATAGTAATCGGCCTTAGCTTGGCACTCGTGCTGTCTTTGCTCAGTATAATGTTGCTCGG
TCGTCTTCGATCGGTGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MFWHIIKNARNPNRYQSNVYSNRRHNRRHHASFHQRHMHPSLHQHPSLQHHQQHHFDSDDLAAGIGIAAGMHVAQSWDSN
NSGWDSSSSFDSGSWSNNDSGSSWSSGDSGGSWSSDSSSSSSSDSFSGDSSGSW

Sequences:

>Translated_134_residues
MFWHIIKNARNPNRYQSNVYSNRRHNRRHHASFHQRHMHPSLHQHPSLQHHQQHHFDSDDLAAGIGIAAGMHVAQSWDSN
NSGWDSSSSFDSGSWSNNDSGSSWSSGDSGGSWSSDSSSSSSSDSFSGDSSGSW
>Mature_134_residues
MFWHIIKNARNPNRYQSNVYSNRRHNRRHHASFHQRHMHPSLHQHPSLQHHQQHHFDSDDLAAGIGIAAGMHVAQSWDSN
NSGWDSSSSFDSGSWSNNDSGSSWSSGDSGGSWSSDSSSSSSSDSFSGDSSGSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14851; Mature: 14851

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWHIIKNARNPNRYQSNVYSNRRHNRRHHASFHQRHMHPSLHQHPSLQHHQQHHFDSDD
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCHHHHHHHCCCCHH
LAAGIGIAAGMHVAQSWDSNNSGWDSSSSFDSGSWSNNDSGSSWSSGDSGGSWSSDSSSS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSSDSFSGDSSGSW
CCCCCCCCCCCCCC
>Mature Secondary Structure
MFWHIIKNARNPNRYQSNVYSNRRHNRRHHASFHQRHMHPSLHQHPSLQHHQQHHFDSDD
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCHHHHHHHCCCCHH
LAAGIGIAAGMHVAQSWDSNNSGWDSSSSFDSGSWSNNDSGSSWSSGDSGGSWSSDSSSS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSSDSFSGDSSGSW
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA