Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900528

Identifier: 159900528

GI number: 159900528

Start: 5122023

End: 5122943

Strand: Direct

Name: 159900528

Synonym: Haur_4015

Alternate gene names: NA

Gene position: 5122023-5122943 (Clockwise)

Preceding gene: 159900527

Following gene: 159900529

Centisome position: 80.71

GC content: 50.6

Gene sequence:

>921_bases
ATGAGCGACCGTACTCCCCCAACCGAAGTTCTCGAATTTGAAAACGATCTTGAGCCAGATCCTGAACCGGAAGAGGTGCC
TTCAGCAATTATTCAAGAGGATGAAGCGATCGCGCCACAAGGCATGACTTTTCAAGCGTTAGTATTTGGCGTAGCCATTA
TTCTGATTATCTTTTTGGTACTGCTGTTGGCGAGTGGCAATAATATCAATCTCTTTAATCTTTTTGGGAGCGATAGCAAT
GCCCAGCCAACCTTGCAACCTTTACTCAATAGCGTTCAAACCCAATCCAATCGCTCGCTCGATGTTGAAGCGGCGGTGCT
GGAAGGCCAACGCTTTTATGGTGTTGATGGATTAAACGCCCTGCCAAGTTATGCTGCTGAGATCGACCCGCTGTTTTTGC
CCTATTGGGTCAAGAATGGCGGCGAACGGATCTTTGGACGACCGATCAGTGGCTTGCTTGAAGAAAATGGCCGCCAATTT
CAATGGTTTGAGCGGGCACGGCTTGAATGGTGGCCTGAGCATCAAGCAACGAAATACGAAGTGCAGCCAGGCCGAGTTGG
GGTTGAATTCACCCAAAACCGCGATTTTCCTAACCAGCAATTTTTTGCCAATCGCCCAGGGCTGCGTTATAGCGAAGCGA
CCCAACAAGGGTTGCGCGGGGCATTCCTTGAATTTTGGGAAGCCAACGGCGGCATCGATCTGCTGGGCTGGCCAATTAGC
GAGGAGTTGCAAGAGGTGCTGCCTGAAGATCGCACAGTGCATACCGTGCAATATTTCGAGCGTGGTCGGCTTGAGCTACA
CCCCAACGATCCCAATCAAATGGTCAAAATTGGCTTATTAGGCCGCGCCCTCTACTTCCAAGATAGTCAGCCAAACTACA
TTGAGCCAGTTGCCCCCACCGCAGTTCCGGTCATTCCTTAG

Upstream 100 bases:

>100_bases
GGAGTATTCTCATTTTGGCGACCAAACCCAACCGATCACGCAGCATTTGCCGCTTTAGCCGAGCGTTTGCGGGCTAACAA
TCAAGCATGAGGAACTGCCC

Downstream 100 bases:

>100_bases
CCCTGAGAAACCTATGAAACCTGAAACCCTGTTAATTCATGCTGGTCGTAGCGTCGATGCTGCGACCAGTGCAGTTACGC
CGCCGATTCATCTTGCCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase S8/S53 Subtilisin Kexin Sedolisin; Sortase Family Protein; Peptidase; VanW Family Protein; N-Acetylmuramoyl-L-Alanine Amidase Domain Protein; ErfK/YbiS/YcfS/YnhG Family; Spore Peptidoglycan Hydrolase; Excalibur Domain Protein; SCP-Like Extracellular; Peptidase S8 And; 5-Nucleotidase Domain-Containing Protein; Beta-Lactamase; Glycoside Hydrolase Family; Polysaccharide Deacetylase; Ig Domain Domain Protein; NLP/P60 Protein

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSDRTPPTEVLEFENDLEPDPEPEEVPSAIIQEDEAIAPQGMTFQALVFGVAIILIIFLVLLLASGNNINLFNLFGSDSN
AQPTLQPLLNSVQTQSNRSLDVEAAVLEGQRFYGVDGLNALPSYAAEIDPLFLPYWVKNGGERIFGRPISGLLEENGRQF
QWFERARLEWWPEHQATKYEVQPGRVGVEFTQNRDFPNQQFFANRPGLRYSEATQQGLRGAFLEFWEANGGIDLLGWPIS
EELQEVLPEDRTVHTVQYFERGRLELHPNDPNQMVKIGLLGRALYFQDSQPNYIEPVAPTAVPVIP

Sequences:

>Translated_306_residues
MSDRTPPTEVLEFENDLEPDPEPEEVPSAIIQEDEAIAPQGMTFQALVFGVAIILIIFLVLLLASGNNINLFNLFGSDSN
AQPTLQPLLNSVQTQSNRSLDVEAAVLEGQRFYGVDGLNALPSYAAEIDPLFLPYWVKNGGERIFGRPISGLLEENGRQF
QWFERARLEWWPEHQATKYEVQPGRVGVEFTQNRDFPNQQFFANRPGLRYSEATQQGLRGAFLEFWEANGGIDLLGWPIS
EELQEVLPEDRTVHTVQYFERGRLELHPNDPNQMVKIGLLGRALYFQDSQPNYIEPVAPTAVPVIP
>Mature_305_residues
SDRTPPTEVLEFENDLEPDPEPEEVPSAIIQEDEAIAPQGMTFQALVFGVAIILIIFLVLLLASGNNINLFNLFGSDSNA
QPTLQPLLNSVQTQSNRSLDVEAAVLEGQRFYGVDGLNALPSYAAEIDPLFLPYWVKNGGERIFGRPISGLLEENGRQFQ
WFERARLEWWPEHQATKYEVQPGRVGVEFTQNRDFPNQQFFANRPGLRYSEATQQGLRGAFLEFWEANGGIDLLGWPISE
ELQEVLPEDRTVHTVQYFERGRLELHPNDPNQMVKIGLLGRALYFQDSQPNYIEPVAPTAVPVIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34539; Mature: 34408

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRTPPTEVLEFENDLEPDPEPEEVPSAIIQEDEAIAPQGMTFQALVFGVAIILIIFLV
CCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LLLASGNNINLFNLFGSDSNAQPTLQPLLNSVQTQSNRSLDVEAAVLEGQRFYGVDGLNA
HHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCCCCCH
LPSYAAEIDPLFLPYWVKNGGERIFGRPISGLLEENGRQFQWFERARLEWWPEHQATKYE
HHHHHHHCCCEEEEHHHCCCCCEECCCCHHHHHHCCCCEEHHHHHHHHHCCCCCCCEEEE
VQPGRVGVEFTQNRDFPNQQFFANRPGLRYSEATQQGLRGAFLEFWEANGGIDLLGWPIS
ECCCCEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHH
EELQEVLPEDRTVHTVQYFERGRLELHPNDPNQMVKIGLLGRALYFQDSQPNYIEPVAPT
HHHHHHCCCCCEEHHHHHHHCCCEEECCCCCHHEEEEEEEEEEEEEECCCCCCCCCCCCC
AVPVIP
CCCCCC
>Mature Secondary Structure 
SDRTPPTEVLEFENDLEPDPEPEEVPSAIIQEDEAIAPQGMTFQALVFGVAIILIIFLV
CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LLLASGNNINLFNLFGSDSNAQPTLQPLLNSVQTQSNRSLDVEAAVLEGQRFYGVDGLNA
HHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEECCCCCCH
LPSYAAEIDPLFLPYWVKNGGERIFGRPISGLLEENGRQFQWFERARLEWWPEHQATKYE
HHHHHHHCCCEEEEHHHCCCCCEECCCCHHHHHHCCCCEEHHHHHHHHHCCCCCCCEEEE
VQPGRVGVEFTQNRDFPNQQFFANRPGLRYSEATQQGLRGAFLEFWEANGGIDLLGWPIS
ECCCCEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHH
EELQEVLPEDRTVHTVQYFERGRLELHPNDPNQMVKIGLLGRALYFQDSQPNYIEPVAPT
HHHHHHCCCCCEEHHHHHHHCCCEEECCCCCHHEEEEEEEEEEEEEECCCCCCCCCCCCC
AVPVIP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA