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The map label for this gene is ycfF [C]

Identifier: 159900527

GI number: 159900527

Start: 5121599

End: 5122012

Strand: Direct

Name: ycfF [C]

Synonym: Haur_4014

Alternate gene names: 159900527

Gene position: 5121599-5122012 (Clockwise)

Preceding gene: 159900526

Following gene: 159900528

Centisome position: 80.7

GC content: 48.31

Gene sequence:

>414_bases
ATGAATGATATATTCAGCAAGATTGTGCGTGGCGAATTGCCTTGCCATAAAGTGGCCGAAAATGACCAAACCCTAGCCTT
TTTAGATATTAATCCGGCGGCCCAAGGCCATACCTTGGTGATTCCCAAGCGCTTTGGTACCGATATTTTCGATACCAACC
CTGAGGATCTGGTAGCGGTGGCGCGGATGGTGCAAACGGTAGCGCAATTATTATTGCAAACGCTTAAACCAGATGGAATT
AATGTGTTGCAGAACTCGCGCCCAGCTTCTGGACAAGTCGTGTTTTACTACCATGTACACGTCATTCCACGTTGGGAAGG
CGATGGAGTATTCTCATTTTGGCGACCAAACCCAACCGATCACGCAGCATTTGCCGCTTTAGCCGAGCGTTTGCGGGCTA
ACAATCAAGCATGA

Upstream 100 bases:

>100_bases
GTAATCAACACATGGGATGCTGAGGCAGTATTGGCGCTGCGTCAGCAAAAATTACAAAAACTTGGGCTTAGTAGCGAATC
GTAGTTTGGAGGCTGATCGC

Downstream 100 bases:

>100_bases
GGAACTGCCCATGAGCGACCGTACTCCCCCAACCGAAGTTCTCGAATTTGAAAACGATCTTGAGCCAGATCCTGAACCGG
AAGAGGTGCCTTCAGCAATT

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNDIFSKIVRGELPCHKVAENDQTLAFLDINPAAQGHTLVIPKRFGTDIFDTNPEDLVAVARMVQTVAQLLLQTLKPDGI
NVLQNSRPASGQVVFYYHVHVIPRWEGDGVFSFWRPNPTDHAAFAALAERLRANNQA

Sequences:

>Translated_137_residues
MNDIFSKIVRGELPCHKVAENDQTLAFLDINPAAQGHTLVIPKRFGTDIFDTNPEDLVAVARMVQTVAQLLLQTLKPDGI
NVLQNSRPASGQVVFYYHVHVIPRWEGDGVFSFWRPNPTDHAAFAALAERLRANNQA
>Mature_137_residues
MNDIFSKIVRGELPCHKVAENDQTLAFLDINPAAQGHTLVIPKRFGTDIFDTNPEDLVAVARMVQTVAQLLLQTLKPDGI
NVLQNSRPASGQVVFYYHVHVIPRWEGDGVFSFWRPNPTDHAAFAALAERLRANNQA

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17506713, Length=99, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6320078, Length=132, Percent_Identity=37.1212121212121, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15276; Mature: 15276

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDIFSKIVRGELPCHKVAENDQTLAFLDINPAAQGHTLVIPKRFGTDIFDTNPEDLVAV
CHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCCCCEEEEEHHHCCCCCCCCHHHHHHH
ARMVQTVAQLLLQTLKPDGINVLQNSRPASGQVVFYYHVHVIPRWEGDGVFSFWRPNPTD
HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEEEEEEEECCCCEEEECCCCCCC
HAAFAALAERLRANNQA
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNDIFSKIVRGELPCHKVAENDQTLAFLDINPAAQGHTLVIPKRFGTDIFDTNPEDLVAV
CHHHHHHHHCCCCCCHHHCCCCCEEEEEECCCCCCCCEEEEEHHHCCCCCCCCHHHHHHH
ARMVQTVAQLLLQTLKPDGINVLQNSRPASGQVVFYYHVHVIPRWEGDGVFSFWRPNPTD
HHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEEEEEEEECCCCEEEECCCCCCC
HAAFAALAERLRANNQA
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]