Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900442

Identifier: 159900442

GI number: 159900442

Start: 4922222

End: 4923184

Strand: Reverse

Name: 159900442

Synonym: Haur_3927

Alternate gene names: NA

Gene position: 4923184-4922222 (Counterclockwise)

Preceding gene: 159900443

Following gene: 159900441

Centisome position: 77.57

GC content: 50.78

Gene sequence:

>963_bases
ATGAGTGCTTCAGAAACTGATAAAGCCGCCCGCCTGGCGGCGATTCGCGCCAAAAATGCTGCCCAAAAAGCCCAAGCTAT
TGAGCCAACCGAGCCTGTGGTTCAAGACAAAGCCGCGCGGTTGGCGGCGATTCGCGCCCAAAATGCCGCCCAAAAAAACG
AATCAGTGGTTACAAGTCAAGTTGTGGCAACCTTACCACTTGGCACAACTCAGCCTAGCACTGCACCAACGCCAATTGCC
AAAGCTACCCCAAACGCGCCAACTCCTAGCGCCGAAGAAATGCTTGAGGATGTTAGCGCCAACCTGATGAGCTTGATGAT
TGCCTTGATTATTGGGATTGTGGCGGCAGTTTTGGTTATGCCGCGCTGGATTCCTGGCCTGAGCAGCTCGTTGATTGGTG
ACCAACCCAAAGCTTTTTGGTATCTTTCGCGCTCAAGTGGCTTGGTGGCCTATAGTTTGGTCTGGCTTTCGATGTTATTT
GGGCTTTCGCTGACGGGTAAAGTTGCGCGTTTGTGGAATGGCGGCCCAACCATGCTCGATCTGCATCAGCACGCTAGTAT
CTTGGGGATTGGCTTTGGTCTATTTCATACGGTGATTTTGCTAGGCGATGGCTATAGCAATTACACATTAAAACAATTGC
TTGTGCCATTTGCTAGCAGCCAATATAAACCATTGTGGATTGGCTTAGGCCAGCTTGGGTTGTATGGTTTGGCACTGGTG
ACGGTGAGTTTTTGGCTCAAACGTTGGATTGGCCGTGGCGCTTGGCGGGCGATTCACTACGCCAGTTTTGGCCTATTTTT
AATGGTTTTGGCTCATGGCATTTTCAGCGGCACTGATACCAGCACTCCATTGGTGAGTTTGTGGTATTGGGCCACCGGTG
CGAGCGTTGTATTTATGACGATCTATCGCATCCTGATTACCCGCCGCAACAAGCCCTTGCCAAGCGTGCCTGTATTATCA
TAA

Upstream 100 bases:

>100_bases
GGATTAATCAGCATCCTGCTTTTGCGGCACTGGCCTTTGATCACGCTGGCAAAAGCTATAGCAGCGAACGTTTTAATAGT
TATCGTTGGGAGTAAATTCG

Downstream 100 bases:

>100_bases
AATTTATGCATTGCTCCTAAACCCAGAGTTTGAGATGCTTCGATATTCCACTTCGAGCCGCCGATTGTGCTTTAGGGGGT
GCAGGGGGATGAAAACACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSASETDKAARLAAIRAKNAAQKAQAIEPTEPVVQDKAARLAAIRAQNAAQKNESVVTSQVVATLPLGTTQPSTAPTPIA
KATPNAPTPSAEEMLEDVSANLMSLMIALIIGIVAAVLVMPRWIPGLSSSLIGDQPKAFWYLSRSSGLVAYSLVWLSMLF
GLSLTGKVARLWNGGPTMLDLHQHASILGIGFGLFHTVILLGDGYSNYTLKQLLVPFASSQYKPLWIGLGQLGLYGLALV
TVSFWLKRWIGRGAWRAIHYASFGLFLMVLAHGIFSGTDTSTPLVSLWYWATGASVVFMTIYRILITRRNKPLPSVPVLS

Sequences:

>Translated_320_residues
MSASETDKAARLAAIRAKNAAQKAQAIEPTEPVVQDKAARLAAIRAQNAAQKNESVVTSQVVATLPLGTTQPSTAPTPIA
KATPNAPTPSAEEMLEDVSANLMSLMIALIIGIVAAVLVMPRWIPGLSSSLIGDQPKAFWYLSRSSGLVAYSLVWLSMLF
GLSLTGKVARLWNGGPTMLDLHQHASILGIGFGLFHTVILLGDGYSNYTLKQLLVPFASSQYKPLWIGLGQLGLYGLALV
TVSFWLKRWIGRGAWRAIHYASFGLFLMVLAHGIFSGTDTSTPLVSLWYWATGASVVFMTIYRILITRRNKPLPSVPVLS
>Mature_319_residues
SASETDKAARLAAIRAKNAAQKAQAIEPTEPVVQDKAARLAAIRAQNAAQKNESVVTSQVVATLPLGTTQPSTAPTPIAK
ATPNAPTPSAEEMLEDVSANLMSLMIALIIGIVAAVLVMPRWIPGLSSSLIGDQPKAFWYLSRSSGLVAYSLVWLSMLFG
LSLTGKVARLWNGGPTMLDLHQHASILGIGFGLFHTVILLGDGYSNYTLKQLLVPFASSQYKPLWIGLGQLGLYGLALVT
VSFWLKRWIGRGAWRAIHYASFGLFLMVLAHGIFSGTDTSTPLVSLWYWATGASVVFMTIYRILITRRNKPLPSVPVLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34460; Mature: 34329

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASETDKAARLAAIRAKNAAQKAQAIEPTEPVVQDKAARLAAIRAQNAAQKNESVVTSQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVATLPLGTTQPSTAPTPIAKATPNAPTPSAEEMLEDVSANLMSLMIALIIGIVAAVLVM
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PRWIPGLSSSLIGDQPKAFWYLSRSSGLVAYSLVWLSMLFGLSLTGKVARLWNGGPTMLD
HHCCCCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEE
LHQHASILGIGFGLFHTVILLGDGYSNYTLKQLLVPFASSQYKPLWIGLGQLGLYGLALV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
TVSFWLKRWIGRGAWRAIHYASFGLFLMVLAHGIFSGTDTSTPLVSLWYWATGASVVFMT
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHH
IYRILITRRNKPLPSVPVLS
HHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SASETDKAARLAAIRAKNAAQKAQAIEPTEPVVQDKAARLAAIRAQNAAQKNESVVTSQ
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVATLPLGTTQPSTAPTPIAKATPNAPTPSAEEMLEDVSANLMSLMIALIIGIVAAVLVM
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PRWIPGLSSSLIGDQPKAFWYLSRSSGLVAYSLVWLSMLFGLSLTGKVARLWNGGPTMLD
HHCCCCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEE
LHQHASILGIGFGLFHTVILLGDGYSNYTLKQLLVPFASSQYKPLWIGLGQLGLYGLALV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
TVSFWLKRWIGRGAWRAIHYASFGLFLMVLAHGIFSGTDTSTPLVSLWYWATGASVVFMT
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHH
IYRILITRRNKPLPSVPVLS
HHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA