Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900354

Identifier: 159900354

GI number: 159900354

Start: 4817267

End: 4818988

Strand: Direct

Name: 159900354

Synonym: Haur_3837

Alternate gene names: NA

Gene position: 4817267-4818988 (Clockwise)

Preceding gene: 159900353

Following gene: 159900359

Centisome position: 75.9

GC content: 54.7

Gene sequence:

>1722_bases
ATGCCTGCATTACAACGCTTCCGCTATCATTGGCCTTTGCTGCTCCTCCTGCTGGTGTATTGCACGCTTGCGGTCTGGTG
GAGTACCCGCATTCCCTTGGGCGAAGGCCCAGATGAGCCAGGCCATGCCGAATATGCCCTATTTGTGGCCCGCAATAATC
GCCTGCCCGATCAGCGTTTAGGCGATGTGCCAGGCGAAGGCCATCAGCCACCACTGGCCTATTGGTTGATGCAACCATTA
GCTCGCTCGGTTGCCGTCGAAGATCGGGTAGTGATTCTAGCGAATAATCATCGCTGGATTTGGGCTGGGGGCAAGGAGCC
AGCCGCCTTTGCTTGGCGCTCAATCGATCGACCACCCTACCAAGCCGATGTGCTGGTATGGCATCGTTTGCGTTGGTTTT
CAATTGGCTGTGCCGCCCTGACGATTGTTGTGGGTTATGCAATCGGTTTACGTTTGGGCTTGAGTAAGACCTTAGCAACC
TTCGCCGCCAGTTTGTTGGCATTTTGGCCGCAATTGCTATTTCACTCAGTTTTAGTCTCGAATGATCCATTGCTATGGCT
GTTGTGTGCTGGCTTGTTATGGCTGTTGCTTGAGCCAAATCCGCAAGCCTGGTGGCCATGGGCGGTTGGGGCAACCCTAG
GGGCAGCCTTACTAACCAAACAAAGTGCGGTGCTGCTAATCCCTTTGATTGGGCTACGGCTTTGGCAATTGCGCCGCTCG
ATCAACCTCTGGCCTGCGCTTGGTTGGCTGAGCCTAAGTAGTACAGCAATAGCAGGTTGGTGGTATGTGCGCAATTTGCT
GCTGTATGGCGACCCATTTGGTTTGGGCTTGTACAAAGGCGAATTTAGCAGCCCAACCTTTTCACCGTGGAGCTTGCACG
ATTGGGGCGAGGCCATGCATGCCTTGGGCAGTTCGCTGATTGCCCGCTTTGGCTGGATGAGCGTGGCCGCGCCGCAATGG
CTGTATTGGTTGTTAGCGATTTGGCTTGGCCTGGCAATTTTAGGCATTCGACGCTTGCGCATCGATCAACGCTGGCAAAT
CGCTTGGGCCTTGGTTGGCTTGGCCTTTGCTTGGACTTTCGCTTTTGCAGTATTGAGTGGCCAAGTTGGCTGGCAAGCTC
GTTTCTTATTTCCGGCGGCTCCGGTGGCGGCGTGTGCCTTGGCGATTGGGCTTGAGCGCAGCATCAAAACGGCGGCTTGG
CTCTTACCAGCGTTATTAGTAACAATGGCGGTGGGCTTGCCAAATACCGTGATCAGCGCGGCCTACCCCTATTTGGTGGT
TGAGCCACAGCCGGAGCGGCCAGTTTTGGCCTTGTGGCGACCCGATACTGCTAATCCAATTGAATTACGCGGCATTTTGC
TGCCCCCAACCGCCAAAGCAGGCCAACCATGGCTGGTCAACACGTTGTGGCGAGCGGTTGGCAAACAAGATCGCCAATGG
TCGTTATTTGTGCATTTGGCCGAGGTTGGCAGCAAAGATGAGAGTTTTGCCTTCGATGTGCAGCCGCAAGATGGGGTTTG
GCATTCGCTACGCTGGACACCCGACGATTGGTGGGAAGATCTACTGACAATCAATATTCCCAGCGATTTGGCTGCTGGCG
AGTATGAAGTGCGAATCGGCTGGTTTGATGAATTTGGCGATTGGAGCCGCGCCGGAGTTTGGAGCCAAGACGGCATCCTG
CTTGGTGATTATGCAGTCGTTGGCAAAGTGGTGGTGGAGTAA

Upstream 100 bases:

>100_bases
ACGACATTCGCTGGTTCTTCTCCAACGATGGTCGGTTCTTGGAACAATTCGGTTAATTCTCCGATCGGCGCTGAATGAGA
CCATTCAGCGCCTTGCTTCA

Downstream 100 bases:

>100_bases
GTAGAGCGAGGCTATCGGCTATTGACGTTAGGCTATCGGAGATTGGTTGGTGTAATGGATGATGAGGTTAACAATCGGTT
CCGCCGTTCCCTCACCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MPALQRFRYHWPLLLLLLVYCTLAVWWSTRIPLGEGPDEPGHAEYALFVARNNRLPDQRLGDVPGEGHQPPLAYWLMQPL
ARSVAVEDRVVILANNHRWIWAGGKEPAAFAWRSIDRPPYQADVLVWHRLRWFSIGCAALTIVVGYAIGLRLGLSKTLAT
FAASLLAFWPQLLFHSVLVSNDPLLWLLCAGLLWLLLEPNPQAWWPWAVGATLGAALLTKQSAVLLIPLIGLRLWQLRRS
INLWPALGWLSLSSTAIAGWWYVRNLLLYGDPFGLGLYKGEFSSPTFSPWSLHDWGEAMHALGSSLIARFGWMSVAAPQW
LYWLLAIWLGLAILGIRRLRIDQRWQIAWALVGLAFAWTFAFAVLSGQVGWQARFLFPAAPVAACALAIGLERSIKTAAW
LLPALLVTMAVGLPNTVISAAYPYLVVEPQPERPVLALWRPDTANPIELRGILLPPTAKAGQPWLVNTLWRAVGKQDRQW
SLFVHLAEVGSKDESFAFDVQPQDGVWHSLRWTPDDWWEDLLTINIPSDLAAGEYEVRIGWFDEFGDWSRAGVWSQDGIL
LGDYAVVGKVVVE

Sequences:

>Translated_573_residues
MPALQRFRYHWPLLLLLLVYCTLAVWWSTRIPLGEGPDEPGHAEYALFVARNNRLPDQRLGDVPGEGHQPPLAYWLMQPL
ARSVAVEDRVVILANNHRWIWAGGKEPAAFAWRSIDRPPYQADVLVWHRLRWFSIGCAALTIVVGYAIGLRLGLSKTLAT
FAASLLAFWPQLLFHSVLVSNDPLLWLLCAGLLWLLLEPNPQAWWPWAVGATLGAALLTKQSAVLLIPLIGLRLWQLRRS
INLWPALGWLSLSSTAIAGWWYVRNLLLYGDPFGLGLYKGEFSSPTFSPWSLHDWGEAMHALGSSLIARFGWMSVAAPQW
LYWLLAIWLGLAILGIRRLRIDQRWQIAWALVGLAFAWTFAFAVLSGQVGWQARFLFPAAPVAACALAIGLERSIKTAAW
LLPALLVTMAVGLPNTVISAAYPYLVVEPQPERPVLALWRPDTANPIELRGILLPPTAKAGQPWLVNTLWRAVGKQDRQW
SLFVHLAEVGSKDESFAFDVQPQDGVWHSLRWTPDDWWEDLLTINIPSDLAAGEYEVRIGWFDEFGDWSRAGVWSQDGIL
LGDYAVVGKVVVE
>Mature_572_residues
PALQRFRYHWPLLLLLLVYCTLAVWWSTRIPLGEGPDEPGHAEYALFVARNNRLPDQRLGDVPGEGHQPPLAYWLMQPLA
RSVAVEDRVVILANNHRWIWAGGKEPAAFAWRSIDRPPYQADVLVWHRLRWFSIGCAALTIVVGYAIGLRLGLSKTLATF
AASLLAFWPQLLFHSVLVSNDPLLWLLCAGLLWLLLEPNPQAWWPWAVGATLGAALLTKQSAVLLIPLIGLRLWQLRRSI
NLWPALGWLSLSSTAIAGWWYVRNLLLYGDPFGLGLYKGEFSSPTFSPWSLHDWGEAMHALGSSLIARFGWMSVAAPQWL
YWLLAIWLGLAILGIRRLRIDQRWQIAWALVGLAFAWTFAFAVLSGQVGWQARFLFPAAPVAACALAIGLERSIKTAAWL
LPALLVTMAVGLPNTVISAAYPYLVVEPQPERPVLALWRPDTANPIELRGILLPPTAKAGQPWLVNTLWRAVGKQDRQWS
LFVHLAEVGSKDESFAFDVQPQDGVWHSLRWTPDDWWEDLLTINIPSDLAAGEYEVRIGWFDEFGDWSRAGVWSQDGILL
GDYAVVGKVVVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64329; Mature: 64198

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALQRFRYHWPLLLLLLVYCTLAVWWSTRIPLGEGPDEPGHAEYALFVARNNRLPDQRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHC
GDVPGEGHQPPLAYWLMQPLARSVAVEDRVVILANNHRWIWAGGKEPAAFAWRSIDRPPY
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCHHHHHHCCCCCCC
QADVLVWHRLRWFSIGCAALTIVVGYAIGLRLGLSKTLATFAASLLAFWPQLLFHSVLVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NDPLLWLLCAGLLWLLLEPNPQAWWPWAVGATLGAALLTKQSAVLLIPLIGLRLWQLRRS
CCCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH
INLWPALGWLSLSSTAIAGWWYVRNLLLYGDPFGLGLYKGEFSSPTFSPWSLHDWGEAMH
CCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHH
ALGSSLIARFGWMSVAAPQWLYWLLAIWLGLAILGIRRLRIDQRWQIAWALVGLAFAWTF
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AFAVLSGQVGWQARFLFPAAPVAACALAIGLERSIKTAAWLLPALLVTMAVGLPNTVISA
HHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
AYPYLVVEPQPERPVLALWRPDTANPIELRGILLPPTAKAGQPWLVNTLWRAVGKQDRQW
CCCEEEECCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCE
SLFVHLAEVGSKDESFAFDVQPQDGVWHSLRWTPDDWWEDLLTINIPSDLAAGEYEVRIG
EEEEEEEHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCEEEEECCCCCCCCCEEEEEE
WFDEFGDWSRAGVWSQDGILLGDYAVVGKVVVE
EECCCCCCCCCCCCCCCCEEEECHHHHHHHCCC
>Mature Secondary Structure 
PALQRFRYHWPLLLLLLVYCTLAVWWSTRIPLGEGPDEPGHAEYALFVARNNRLPDQRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHC
GDVPGEGHQPPLAYWLMQPLARSVAVEDRVVILANNHRWIWAGGKEPAAFAWRSIDRPPY
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCHHHHHHCCCCCCC
QADVLVWHRLRWFSIGCAALTIVVGYAIGLRLGLSKTLATFAASLLAFWPQLLFHSVLVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NDPLLWLLCAGLLWLLLEPNPQAWWPWAVGATLGAALLTKQSAVLLIPLIGLRLWQLRRS
CCCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH
INLWPALGWLSLSSTAIAGWWYVRNLLLYGDPFGLGLYKGEFSSPTFSPWSLHDWGEAMH
CCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHH
ALGSSLIARFGWMSVAAPQWLYWLLAIWLGLAILGIRRLRIDQRWQIAWALVGLAFAWTF
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AFAVLSGQVGWQARFLFPAAPVAACALAIGLERSIKTAAWLLPALLVTMAVGLPNTVISA
HHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
AYPYLVVEPQPERPVLALWRPDTANPIELRGILLPPTAKAGQPWLVNTLWRAVGKQDRQW
CCCEEEECCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCE
SLFVHLAEVGSKDESFAFDVQPQDGVWHSLRWTPDDWWEDLLTINIPSDLAAGEYEVRIG
EEEEEEEHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCEEEEECCCCCCCCCEEEEEE
WFDEFGDWSRAGVWSQDGILLGDYAVVGKVVVE
EECCCCCCCCCCCCCCCCEEEECHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA