Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yggT [C]

Identifier: 159900359

GI number: 159900359

Start: 4825132

End: 4825386

Strand: Direct

Name: yggT [C]

Synonym: Haur_3842

Alternate gene names: 159900359

Gene position: 4825132-4825386 (Clockwise)

Preceding gene: 159900354

Following gene: 159900360

Centisome position: 76.03

GC content: 43.92

Gene sequence:

>255_bases
ATGGGCAATTTCATTAGCCAGTTTTTTCTCCTATTAATCCCAATTCTCGAAATCGCGATTTTTGTGCGAATCATCATGTC
GTGGTTTGATCCGACGGGTCAATCACGCTTTGCCTTGATTCTGCGCGAAATCACCGACCCAATCTTGCTACCAATTCGGC
GAGTTATTCCATCTATCGGCATGTTTGATCTCTCGCCATTAATTGCGCTGCTGATTCTGCAAGTTTTGCAAACGGTTTTC
CAATCGGTTAGCTAA

Upstream 100 bases:

>100_bases
GTGACATCGGGCAATTTATGCTGCGCTTAGCTGACCATAAGCCAAACGCTTATGGTATACTTCACGCAGAAATGCGGCAA
ACCACCTGTTGGGGGCGCTC

Downstream 100 bases:

>100_bases
AGCGCTAATTGATTTTTTAGTCATGCCGTGCCGTGGATGCAACGCCCAGTGGGTGGCTTCCACGGCTTTTTGTTGAAAGG
ATTCAAGCATTGGCACGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MGNFISQFFLLLIPILEIAIFVRIIMSWFDPTGQSRFALILREITDPILLPIRRVIPSIGMFDLSPLIALLILQVLQTVF
QSVS

Sequences:

>Translated_84_residues
MGNFISQFFLLLIPILEIAIFVRIIMSWFDPTGQSRFALILREITDPILLPIRRVIPSIGMFDLSPLIALLILQVLQTVF
QSVS
>Mature_83_residues
GNFISQFFLLLIPILEIAIFVRIIMSWFDPTGQSRFALILREITDPILLPIRRVIPSIGMFDLSPLIALLILQVLQTVFQ
SVS

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9572; Mature: 9441

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNFISQFFLLLIPILEIAIFVRIIMSWFDPTGQSRFALILREITDPILLPIRRVIPSIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
MFDLSPLIALLILQVLQTVFQSVS
CHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GNFISQFFLLLIPILEIAIFVRIIMSWFDPTGQSRFALILREITDPILLPIRRVIPSIG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
MFDLSPLIALLILQVLQTVFQSVS
CHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA