| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yggT [C]
Identifier: 159900359
GI number: 159900359
Start: 4825132
End: 4825386
Strand: Direct
Name: yggT [C]
Synonym: Haur_3842
Alternate gene names: 159900359
Gene position: 4825132-4825386 (Clockwise)
Preceding gene: 159900354
Following gene: 159900360
Centisome position: 76.03
GC content: 43.92
Gene sequence:
>255_bases ATGGGCAATTTCATTAGCCAGTTTTTTCTCCTATTAATCCCAATTCTCGAAATCGCGATTTTTGTGCGAATCATCATGTC GTGGTTTGATCCGACGGGTCAATCACGCTTTGCCTTGATTCTGCGCGAAATCACCGACCCAATCTTGCTACCAATTCGGC GAGTTATTCCATCTATCGGCATGTTTGATCTCTCGCCATTAATTGCGCTGCTGATTCTGCAAGTTTTGCAAACGGTTTTC CAATCGGTTAGCTAA
Upstream 100 bases:
>100_bases GTGACATCGGGCAATTTATGCTGCGCTTAGCTGACCATAAGCCAAACGCTTATGGTATACTTCACGCAGAAATGCGGCAA ACCACCTGTTGGGGGCGCTC
Downstream 100 bases:
>100_bases AGCGCTAATTGATTTTTTAGTCATGCCGTGCCGTGGATGCAACGCCCAGTGGGTGGCTTCCACGGCTTTTTGTTGAAAGG ATTCAAGCATTGGCACGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MGNFISQFFLLLIPILEIAIFVRIIMSWFDPTGQSRFALILREITDPILLPIRRVIPSIGMFDLSPLIALLILQVLQTVF QSVS
Sequences:
>Translated_84_residues MGNFISQFFLLLIPILEIAIFVRIIMSWFDPTGQSRFALILREITDPILLPIRRVIPSIGMFDLSPLIALLILQVLQTVF QSVS >Mature_83_residues GNFISQFFLLLIPILEIAIFVRIIMSWFDPTGQSRFALILREITDPILLPIRRVIPSIGMFDLSPLIALLILQVLQTVFQ SVS
Specific function: Unknown
COG id: COG0762
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9572; Mature: 9441
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNFISQFFLLLIPILEIAIFVRIIMSWFDPTGQSRFALILREITDPILLPIRRVIPSIG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC MFDLSPLIALLILQVLQTVFQSVS CHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GNFISQFFLLLIPILEIAIFVRIIMSWFDPTGQSRFALILREITDPILLPIRRVIPSIG CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC MFDLSPLIALLILQVLQTVFQSVS CHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA