Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900342

Identifier: 159900342

GI number: 159900342

Start: 4800732

End: 4803611

Strand: Direct

Name: 159900342

Synonym: Haur_3825

Alternate gene names: NA

Gene position: 4800732-4803611 (Clockwise)

Preceding gene: 159900340

Following gene: 159900343

Centisome position: 75.64

GC content: 52.53

Gene sequence:

>2880_bases
ATGCTCTGGTATAATGGCACGTTGTTGTCGATGAAACGATTTGAGGCTGGCTTGGTACAAGACTGGTGGCAACGCCGCGC
TGCATGGTCGCTGCGTCAATGGATCATTACAATCGCAAGTGTGTTGCTGATGGCGCTATGCTTATTAACCGCGCTCTATC
AGTTGCCGACTCATGTGCGGATCGCCAGCGACGGCTTGGGTGATCAGCCGTTTTTGGTTTCAAGCGAGGCACTAGGCCAA
GCTGCCACCGATCTTGGCACGGTCTTCCCCGATGAACTCGACGCAACTGGCGGGCGGTTTCGCTGGACACGCGGCAGCAC
CCAAATTCAGATTCCGGCACTCGGCGCACATAGCAGTTATAGGCTTGAGCTTGATGTAGTTGGCTGGCCCGACGATGTGC
TACGCAGCGATGTACGCCAGCCATTTGTGCATGTGTTGGTCAATCAACAGCTGATCGCCGTATTTGAGGCCAGCAGCCAA
CGCACCATCTATCAATTAAATACTCCAGCACTCAATCAAAGCAACCTTGAGCTTGAATTACGCCTGAGCCACGACCCACA
GCAGCTTGCCCCCTTGGATAATACTGCCACCTTCACTGGCACGACGCTCTATCCCAACGACCGCCGCCCCCATGGTTTGC
GCTTGTATGGCCTTAGCGCCACGACCAACACTGTAGGCTTTAATTTGCCTGCCTGGAGCTTGATTTGGCGTGTAGCAGTG
GCCTTGGGCTTGATCCTCCTGGCTGGTTGGCTCTATCCGCGTGAGCGTTTGCCATTGTTTTTGCTTGGGTTGCTCTTGGT
CGTTTTTTGGCTGACCCTGGGCTATCTTGCCCGCCACTGGCTGTTGCCATCGTTTGAGTTGGTGCTGTTGGGGCTTGGTT
TTGTGGTGGTTTGGAATTGGCAACGCCAGATTATTGATACCTGGTTGCATTTCCGCCAGCGCTTGTTGCAAGGCCAAAAT
CTTGATTATGGTTTAGCTGTGGCTGCACTGATTGGCCTGCTGGCTATCAGTTGGCCCAGCCTTAGCCAAGCCGCCAACGA
ATGGCTACCCAAAGCCAAAAAGCTCGATCCTGGGGCGATTATTGTGGTTTCGTTGGCAGTAGCTAGCTTGTTTATTGCAG
GCTTCTACTGGGGCGATCTCAATCGGTTGCTCGATCGGCTCAATCGGCGTTTGCGCACCCGCCAAGGCTTGGGCTGGGCC
TTGCTAGGCTTAGTGGTTGGGGTTTGGTTAGTCTATAGCTGGGGCGTAATTCGCCAAATTAACTACCTTGGCAACGCCGA
TTACTCCGATAACGGTGTAGTTGCCCGCAACTTGGTGGCGGGGCGTGGCTGGGTCGTTGATTATGTCACCCAATTTTTCA
AACTGTATCCCGATGGCAGCGTGACCCGCGTGCAAGAAACCTGGCCAATGTTGCAGCCAGTCTGGATTGCGCCATTCTTT
GCCTTGTTTGGGCCAGAACCGTGGGCCGCCAAAATCCCCAACCTGATCTTTTTTAGTTTGCTGTCGATCGTGGTCTATCG
TATTGCCCGTCAGTTGTGGGATCAACGGGTTGGTTTGATTGCGGTGCTGTTGGTGCTGATCAATCGACATATGTTCCGCT
TGATGATCTATAGCACCTCGGATTTGGCGTTTGTGCTGTTCTACACAGCGGCGATTTGGTTGCTCTGGCGTAGTTTGGTA
ACTCATAGCAAAGAGCGCTTGCTTGGCTCAGGCCTGATCATCGGCCTCATGTGTTGGCAAAAAACCAGCGCCGTAATTGT
AGCGATTGGCATGGGCTTGTGGCTGATTTGGCGTTTGTGGCAGGTCGAAGATCGCTGGAAAGCCTATCGCACTGCTGCTT
TGTGGTGGGTACTCCCAGCGGTTTTGGTGTTCTCACCTTATATTGCCCGCAACCTGCACGAATTTGGCAAACCCGCCTTT
TCGACCGAAAGTTATGATGCTTGGATCATCGGCTACACAAATTTCGATTCGATCTACAATATCTACACCAACGAGCAAGG
CTTGCCCGGGAGCAACGGCTTACCTGAACCAAGCTGGATTCTGCGTTGGGGCTATCAAAAGACCTTTGATAAAATTGGTA
ACCAATTTGAAGCGACTCGCAACTATTTGTTGCCAGCTAGCCCAGCTTTGGGCATGTTCAGCGGTCGCGGCAATTTGATG
GGCAATAACGATCAGGGCGTTAATGGTCAGCCCTATGTGTGGTTGATGTTGGGTGCGTGGCTAAGCTTAATTGGTTTGAT
TGCTGCTCGCCGCCAACAAGCCAGCTTGATCGCCTTGGTTGGAGCGAGTTTCACACCATATATTATCTTCTTGGCGCTCT
ATTGGCACGCTGATGAAGAACGCTATTTTGTGCCATTAGTGCCATTTTTGGCCTTACTGGCGGCTGGGGCGTTGGTGGCA
ATTCACGATGCAATTGCTCGTTGCTGGAACCAGCGTGGTCGTCCGTTGGCCTTGTTGGTAGCGGCTCAATTGCTGGTCTT
GGCGCTCACCCCGGGGTGGGTTGAGGCCGCTAACAAAAGTGCTACCGTCGCAGGCAGCGAGTATGCCGAATGGCAACCCG
ATTTGCAGGCCTTTGAATGGTTGCGCCAAAACACACCACCAGAGGCGGTGGTTATGACCCGCGTGCCATGGCAACTCAAT
TTTCATGCTGAACGCGCTGCTGTGATGAACCCAAATGTGGCCGATTTAGCCGTGATTAAACAGGTTGCTGACTATTACAA
GGCCTCGTTTATTCTGGTCAATGCTGTGCAAAACAACAAAGATCAAGCTCAAATTGGCTTAGGCCGCTTGCTCAAAGGCG
AGGAGCTACCTGGGTTTGTGCTACGAGCCAGCTTTGCGGGGCCGAAAAACCGCACAGTCTATATCTACGAAATTCAATAA

Upstream 100 bases:

>100_bases
CTGAGTGTGAGGATCGATAGCGAAATAGTTATCTCGGTTATCCGATTCGTCCAATCAATCGGTTGATCGTAATGCCAAAT
TGCAAAAAAGCGCCGATGCG

Downstream 100 bases:

>100_bases
ATACAGTTTGCTGGAGCCAAAACTGTAGCTGCAATGTTCCAACGACTCCAAACTGATTGATCATCATACACGGCTATTGC
ATGTTGATAGCCTATGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 959; Mature: 959

Protein sequence:

>959_residues
MLWYNGTLLSMKRFEAGLVQDWWQRRAAWSLRQWIITIASVLLMALCLLTALYQLPTHVRIASDGLGDQPFLVSSEALGQ
AATDLGTVFPDELDATGGRFRWTRGSTQIQIPALGAHSSYRLELDVVGWPDDVLRSDVRQPFVHVLVNQQLIAVFEASSQ
RTIYQLNTPALNQSNLELELRLSHDPQQLAPLDNTATFTGTTLYPNDRRPHGLRLYGLSATTNTVGFNLPAWSLIWRVAV
ALGLILLAGWLYPRERLPLFLLGLLLVVFWLTLGYLARHWLLPSFELVLLGLGFVVVWNWQRQIIDTWLHFRQRLLQGQN
LDYGLAVAALIGLLAISWPSLSQAANEWLPKAKKLDPGAIIVVSLAVASLFIAGFYWGDLNRLLDRLNRRLRTRQGLGWA
LLGLVVGVWLVYSWGVIRQINYLGNADYSDNGVVARNLVAGRGWVVDYVTQFFKLYPDGSVTRVQETWPMLQPVWIAPFF
ALFGPEPWAAKIPNLIFFSLLSIVVYRIARQLWDQRVGLIAVLLVLINRHMFRLMIYSTSDLAFVLFYTAAIWLLWRSLV
THSKERLLGSGLIIGLMCWQKTSAVIVAIGMGLWLIWRLWQVEDRWKAYRTAALWWVLPAVLVFSPYIARNLHEFGKPAF
STESYDAWIIGYTNFDSIYNIYTNEQGLPGSNGLPEPSWILRWGYQKTFDKIGNQFEATRNYLLPASPALGMFSGRGNLM
GNNDQGVNGQPYVWLMLGAWLSLIGLIAARRQQASLIALVGASFTPYIIFLALYWHADEERYFVPLVPFLALLAAGALVA
IHDAIARCWNQRGRPLALLVAAQLLVLALTPGWVEAANKSATVAGSEYAEWQPDLQAFEWLRQNTPPEAVVMTRVPWQLN
FHAERAAVMNPNVADLAVIKQVADYYKASFILVNAVQNNKDQAQIGLGRLLKGEELPGFVLRASFAGPKNRTVYIYEIQ

Sequences:

>Translated_959_residues
MLWYNGTLLSMKRFEAGLVQDWWQRRAAWSLRQWIITIASVLLMALCLLTALYQLPTHVRIASDGLGDQPFLVSSEALGQ
AATDLGTVFPDELDATGGRFRWTRGSTQIQIPALGAHSSYRLELDVVGWPDDVLRSDVRQPFVHVLVNQQLIAVFEASSQ
RTIYQLNTPALNQSNLELELRLSHDPQQLAPLDNTATFTGTTLYPNDRRPHGLRLYGLSATTNTVGFNLPAWSLIWRVAV
ALGLILLAGWLYPRERLPLFLLGLLLVVFWLTLGYLARHWLLPSFELVLLGLGFVVVWNWQRQIIDTWLHFRQRLLQGQN
LDYGLAVAALIGLLAISWPSLSQAANEWLPKAKKLDPGAIIVVSLAVASLFIAGFYWGDLNRLLDRLNRRLRTRQGLGWA
LLGLVVGVWLVYSWGVIRQINYLGNADYSDNGVVARNLVAGRGWVVDYVTQFFKLYPDGSVTRVQETWPMLQPVWIAPFF
ALFGPEPWAAKIPNLIFFSLLSIVVYRIARQLWDQRVGLIAVLLVLINRHMFRLMIYSTSDLAFVLFYTAAIWLLWRSLV
THSKERLLGSGLIIGLMCWQKTSAVIVAIGMGLWLIWRLWQVEDRWKAYRTAALWWVLPAVLVFSPYIARNLHEFGKPAF
STESYDAWIIGYTNFDSIYNIYTNEQGLPGSNGLPEPSWILRWGYQKTFDKIGNQFEATRNYLLPASPALGMFSGRGNLM
GNNDQGVNGQPYVWLMLGAWLSLIGLIAARRQQASLIALVGASFTPYIIFLALYWHADEERYFVPLVPFLALLAAGALVA
IHDAIARCWNQRGRPLALLVAAQLLVLALTPGWVEAANKSATVAGSEYAEWQPDLQAFEWLRQNTPPEAVVMTRVPWQLN
FHAERAAVMNPNVADLAVIKQVADYYKASFILVNAVQNNKDQAQIGLGRLLKGEELPGFVLRASFAGPKNRTVYIYEIQ
>Mature_959_residues
MLWYNGTLLSMKRFEAGLVQDWWQRRAAWSLRQWIITIASVLLMALCLLTALYQLPTHVRIASDGLGDQPFLVSSEALGQ
AATDLGTVFPDELDATGGRFRWTRGSTQIQIPALGAHSSYRLELDVVGWPDDVLRSDVRQPFVHVLVNQQLIAVFEASSQ
RTIYQLNTPALNQSNLELELRLSHDPQQLAPLDNTATFTGTTLYPNDRRPHGLRLYGLSATTNTVGFNLPAWSLIWRVAV
ALGLILLAGWLYPRERLPLFLLGLLLVVFWLTLGYLARHWLLPSFELVLLGLGFVVVWNWQRQIIDTWLHFRQRLLQGQN
LDYGLAVAALIGLLAISWPSLSQAANEWLPKAKKLDPGAIIVVSLAVASLFIAGFYWGDLNRLLDRLNRRLRTRQGLGWA
LLGLVVGVWLVYSWGVIRQINYLGNADYSDNGVVARNLVAGRGWVVDYVTQFFKLYPDGSVTRVQETWPMLQPVWIAPFF
ALFGPEPWAAKIPNLIFFSLLSIVVYRIARQLWDQRVGLIAVLLVLINRHMFRLMIYSTSDLAFVLFYTAAIWLLWRSLV
THSKERLLGSGLIIGLMCWQKTSAVIVAIGMGLWLIWRLWQVEDRWKAYRTAALWWVLPAVLVFSPYIARNLHEFGKPAF
STESYDAWIIGYTNFDSIYNIYTNEQGLPGSNGLPEPSWILRWGYQKTFDKIGNQFEATRNYLLPASPALGMFSGRGNLM
GNNDQGVNGQPYVWLMLGAWLSLIGLIAARRQQASLIALVGASFTPYIIFLALYWHADEERYFVPLVPFLALLAAGALVA
IHDAIARCWNQRGRPLALLVAAQLLVLALTPGWVEAANKSATVAGSEYAEWQPDLQAFEWLRQNTPPEAVVMTRVPWQLN
FHAERAAVMNPNVADLAVIKQVADYYKASFILVNAVQNNKDQAQIGLGRLLKGEELPGFVLRASFAGPKNRTVYIYEIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 108213; Mature: 108213

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWYNGTLLSMKRFEAGLVQDWWQRRAAWSLRQWIITIASVLLMALCLLTALYQLPTHVR
CEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IASDGLGDQPFLVSSEALGQAATDLGTVFPDELDATGGRFRWTRGSTQIQIPALGAHSSY
EECCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCE
RLELDVVGWPDDVLRSDVRQPFVHVLVNQQLIAVFEASSQRTIYQLNTPALNQSNLELEL
EEEEEEECCCHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCEEEEECCCCCCCCCCEEEE
RLSHDPQQLAPLDNTATFTGTTLYPNDRRPHGLRLYGLSATTNTVGFNLPAWSLIWRVAV
EECCCHHHHCCCCCCCEEECEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
ALGLILLAGWLYPRERLPLFLLGLLLVVFWLTLGYLARHWLLPSFELVLLGLGFVVVWNW
HHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECH
QRQIIDTWLHFRQRLLQGQNLDYGLAVAALIGLLAISWPSLSQAANEWLPKAKKLDPGAI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHH
IVVSLAVASLFIAGFYWGDLNRLLDRLNRRLRTRQGLGWALLGLVVGVWLVYSWGVIRQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NYLGNADYSDNGVVARNLVAGRGWVVDYVTQFFKLYPDGSVTRVQETWPMLQPVWIAPFF
HHHCCCCCCCCCCEEHHHHCCCCHHHHHHHHHHHHCCCCCCEEHHHHCCCCCHHHHHHHH
ALFGPEPWAAKIPNLIFFSLLSIVVYRIARQLWDQRVGLIAVLLVLINRHMFRLMIYSTS
HHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
DLAFVLFYTAAIWLLWRSLVTHSKERLLGSGLIIGLMCWQKTSAVIVAIGMGLWLIWRLW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
QVEDRWKAYRTAALWWVLPAVLVFSPYIARNLHEFGKPAFSTESYDAWIIGYTNFDSIYN
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHEE
IYTNEQGLPGSNGLPEPSWILRWGYQKTFDKIGNQFEATRNYLLPASPALGMFSGRGNLM
EECCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCC
GNNDQGVNGQPYVWLMLGAWLSLIGLIAARRQQASLIALVGASFTPYIIFLALYWHADEE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCC
RYFVPLVPFLALLAAGALVAIHDAIARCWNQRGRPLALLVAAQLLVLALTPGWVEAANKS
CEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCC
ATVAGSEYAEWQPDLQAFEWLRQNTPPEAVVMTRVPWQLNFHAERAAVMNPNVADLAVIK
CEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCEECCCCHHHHHHHH
QVADYYKASFILVNAVQNNKDQAQIGLGRLLKGEELPGFVLRASFAGPKNRTVYIYEIQ
HHHHHHHHHEEEEEEHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEC
>Mature Secondary Structure
MLWYNGTLLSMKRFEAGLVQDWWQRRAAWSLRQWIITIASVLLMALCLLTALYQLPTHVR
CEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IASDGLGDQPFLVSSEALGQAATDLGTVFPDELDATGGRFRWTRGSTQIQIPALGAHSSY
EECCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCE
RLELDVVGWPDDVLRSDVRQPFVHVLVNQQLIAVFEASSQRTIYQLNTPALNQSNLELEL
EEEEEEECCCHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCEEEEECCCCCCCCCCEEEE
RLSHDPQQLAPLDNTATFTGTTLYPNDRRPHGLRLYGLSATTNTVGFNLPAWSLIWRVAV
EECCCHHHHCCCCCCCEEECEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
ALGLILLAGWLYPRERLPLFLLGLLLVVFWLTLGYLARHWLLPSFELVLLGLGFVVVWNW
HHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECH
QRQIIDTWLHFRQRLLQGQNLDYGLAVAALIGLLAISWPSLSQAANEWLPKAKKLDPGAI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHH
IVVSLAVASLFIAGFYWGDLNRLLDRLNRRLRTRQGLGWALLGLVVGVWLVYSWGVIRQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NYLGNADYSDNGVVARNLVAGRGWVVDYVTQFFKLYPDGSVTRVQETWPMLQPVWIAPFF
HHHCCCCCCCCCCEEHHHHCCCCHHHHHHHHHHHHCCCCCCEEHHHHCCCCCHHHHHHHH
ALFGPEPWAAKIPNLIFFSLLSIVVYRIARQLWDQRVGLIAVLLVLINRHMFRLMIYSTS
HHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
DLAFVLFYTAAIWLLWRSLVTHSKERLLGSGLIIGLMCWQKTSAVIVAIGMGLWLIWRLW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
QVEDRWKAYRTAALWWVLPAVLVFSPYIARNLHEFGKPAFSTESYDAWIIGYTNFDSIYN
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHEE
IYTNEQGLPGSNGLPEPSWILRWGYQKTFDKIGNQFEATRNYLLPASPALGMFSGRGNLM
EECCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCC
GNNDQGVNGQPYVWLMLGAWLSLIGLIAARRQQASLIALVGASFTPYIIFLALYWHADEE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCC
RYFVPLVPFLALLAAGALVAIHDAIARCWNQRGRPLALLVAAQLLVLALTPGWVEAANKS
CEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCC
ATVAGSEYAEWQPDLQAFEWLRQNTPPEAVVMTRVPWQLNFHAERAAVMNPNVADLAVIK
CEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCEECCCCHHHHHHHH
QVADYYKASFILVNAVQNNKDQAQIGLGRLLKGEELPGFVLRASFAGPKNRTVYIYEIQ
HHHHHHHHHEEEEEEHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA