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The map label for this gene is pdxT

Identifier: 159900324

GI number: 159900324

Start: 4779127

End: 4779699

Strand: Reverse

Name: pdxT

Synonym: Haur_3807

Alternate gene names: 159900324

Gene position: 4779699-4779127 (Counterclockwise)

Preceding gene: 159900325

Following gene: 159900323

Centisome position: 75.31

GC content: 51.66

Gene sequence:

>573_bases
ATGACGGTTGGAGTTTTGGCGCTGCAAGGCGCGTTTATTGAGCATGAAACAATGCTCCAAGGCTTGGGCGTGGCAACCTT
GCAGGTGCGCTTGCCTGAACAATTAGTCCAAGTTGAGCGTTTGATTATTCCTGGTGGCGAGAGCACGACGATTGGTAAAT
TGTTGGTGCGCTTCGATTTGCTGGAGCCAATTCAGCAACGAGCCGCCGAAGGCATGCCAATTTGGGGCACATGCGCTGGC
ATGATTTTGCTGGCCAAGGAAATTGCCGAAGGTCGAGTTGAAGGCCAGCCAGCGCTTGGTTTGATGGATATTACTGCGCG
ACGCAACGCTTTTGGTCGCCAAGTTGATAGTTTTGAAACCAACTTGCAGGTGCCAGTGCTTGGCGAAGCACCATTTCATG
CAGTTTTTATCCGTGCCCCGCAGATCGATAAGGTGGGTGAGGCCGTCGAAACTTTAGCCAGTTTAGATGATGGGCGGATT
GTGGCGGCTCGTCAGGGTAAACTCTTGGCAACCGCTTTTCACCCCGAATTAACTGGCGATGCCCGTTTCCATGAATTGTT
TTTAGGCTTGTAG

Upstream 100 bases:

>100_bases
GTTGGTAATGTTATAAAGTCAAAAGGCAGAAGGCAAAAGGCAAAGCAGCAACGATGCTAGCCGATTGCCTTCTTTTTTAT
ATTCAAAAAGGAATAAAGCA

Downstream 100 bases:

>100_bases
GCAAGTACCTTCAACTTCAAGTCTAATCAGTCGCTCGTGGGCTATTTTTTTAACGCAGAGGCGCAGAGCTTTTTTAACCA
CGAAGAACACGAAGAACACG

Product: SNO glutamine amidotransferase

Products: NA

Alternate protein names: Glutamine amidotransferase glutaminase subunit pdxT

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTVGVLALQGAFIEHETMLQGLGVATLQVRLPEQLVQVERLIIPGGESTTIGKLLVRFDLLEPIQQRAAEGMPIWGTCAG
MILLAKEIAEGRVEGQPALGLMDITARRNAFGRQVDSFETNLQVPVLGEAPFHAVFIRAPQIDKVGEAVETLASLDDGRI
VAARQGKLLATAFHPELTGDARFHELFLGL

Sequences:

>Translated_190_residues
MTVGVLALQGAFIEHETMLQGLGVATLQVRLPEQLVQVERLIIPGGESTTIGKLLVRFDLLEPIQQRAAEGMPIWGTCAG
MILLAKEIAEGRVEGQPALGLMDITARRNAFGRQVDSFETNLQVPVLGEAPFHAVFIRAPQIDKVGEAVETLASLDDGRI
VAARQGKLLATAFHPELTGDARFHELFLGL
>Mature_189_residues
TVGVLALQGAFIEHETMLQGLGVATLQVRLPEQLVQVERLIIPGGESTTIGKLLVRFDLLEPIQQRAAEGMPIWGTCAGM
ILLAKEIAEGRVEGQPALGLMDITARRNAFGRQVDSFETNLQVPVLGEAPFHAVFIRAPQIDKVGEAVETLASLDDGRIV
AARQGKLLATAFHPELTGDARFHELFLGL

Specific function: Involved in the hydrolysis of glutamine to glutamate and ammonia. Channels an ammonia molecule to pdxS

COG id: COG0311

COG function: function code H; Predicted glutamine amidotransferase involved in pyridoxine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine amidotransferase pdxT/SNO family

Homologues:

Organism=Saccharomyces cerevisiae, GI6323742, Length=204, Percent_Identity=37.7450980392157, Blast_Score=122, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6323995, Length=215, Percent_Identity=37.2093023255814, Blast_Score=112, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6321048, Length=215, Percent_Identity=36.7441860465116, Blast_Score=111, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PDXT_HERA2 (A9B890)

Other databases:

- EMBL:   CP000875
- RefSeq:   YP_001546571.1
- ProteinModelPortal:   A9B890
- SMR:   A9B890
- GeneID:   5735671
- GenomeReviews:   CP000875_GR
- KEGG:   hau:Haur_3807
- HOGENOM:   HBG292341
- OMA:   QGDVREH
- ProtClustDB:   CLSK974632
- BioCyc:   HAUR316274:HAUR_3807-MONOMER
- HAMAP:   MF_01615
- InterPro:   IPR002161
- InterPro:   IPR021196
- PIRSF:   PIRSF005639
- TIGRFAMs:   TIGR03800

Pfam domain/function: PF01174 SNO

EC number: NA

Molecular weight: Translated: 20529; Mature: 20398

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS01236 PDXT_SNO_1; PS51130 PDXT_SNO_2

Important sites: ACT_SITE 78-78 ACT_SITE 174-174 ACT_SITE 176-176 BINDING 108-108

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGVLALQGAFIEHETMLQGLGVATLQVRLPEQLVQVERLIIPGGESTTIGKLLVRFDL
CCEEEEEECCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHEECCCCCHHHHHHHHHHHH
LEPIQQRAAEGMPIWGTCAGMILLAKEIAEGRVEGQPALGLMDITARRNAFGRQVDSFET
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCHHCHHC
NLQVPVLGEAPFHAVFIRAPQIDKVGEAVETLASLDDGRIVAARQGKLLATAFHPELTGD
CCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCC
ARFHELFLGL
HHHHHHHHCC
>Mature Secondary Structure 
TVGVLALQGAFIEHETMLQGLGVATLQVRLPEQLVQVERLIIPGGESTTIGKLLVRFDL
CEEEEEECCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHEECCCCCHHHHHHHHHHHH
LEPIQQRAAEGMPIWGTCAGMILLAKEIAEGRVEGQPALGLMDITARRNAFGRQVDSFET
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCHHCHHC
NLQVPVLGEAPFHAVFIRAPQIDKVGEAVETLASLDDGRIVAARQGKLLATAFHPELTGD
CCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCC
ARFHELFLGL
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA