Click here to switch to the map view.

The map label for this gene is 159900323

Identifier: 159900323

GI number: 159900323

Start: 4777512

End: 4778783

Strand: Reverse

Name: 159900323

Synonym: Haur_3806

Alternate gene names: NA

Gene position: 4778783-4777512 (Counterclockwise)

Preceding gene: 159900324

Following gene: 159900322

Centisome position: 75.3

GC content: 50.39

Gene sequence:

>1272_bases
ATGCAACAGGTAGTACGTGTTTTTCATCAACTCTTGCCCGATTTTGTTGATCATGTGTCCGAGCAAATTGTTGCTAACCA
TGTGCCTGTGTATGCCAGCTTGCCGCAGCAGCATGTCAAAATGGCGCTCTACAATGCCATTCATTCAATCGAGATCGATT
TAGCCCAAGGCACAACCTCAACCTATGCCGATTATTGGCGTGAGGTGGCGGTGCAACGTGCCCAACAAGGCATTTCACCA
GTTCACAGCATGCTCGTTACCCATCTTTCAACCAATGTGATGACCCAATTTTTGAAGCAAGCCTTGGATCGTGAGCCAGA
AGCCTTGGCCTGGTGGCTCGAACGTACCCACACGATTATTTCGCTGGGCATGTTGGTAATGACCGAGGCACGAATTAATG
CCTTGCAACAACTTGGGCAGCTAGGAAGCGAGCCAGCCAGCAGCGGGATTATCATCCACGAACAGCCCAATTTGATTTTG
CCACCTAGCCGCTGGCAAACCCCACAAGTGTTGCATTTGCAAGCCTTTGGCCAAATGCGGGCCTGGCGTGGCTCAAGCGA
AGTGCTCAATTGGGGTCGTAAATCGGCAATCGCCTTGCTTGGGATTTTAATTACCCAACGCGGCCAATGGATTCAGCGTG
AGCAAATTTGCGATCTGTTCTGGCCTGATTTAGCCCCAAATCAAGCCGAAGCCCACTTTAAAGTTGCCCTGAATGCGCTA
ACCGCTGTGTTGGAGCCAGAACGCCCGACGCGCCAAGCCTCAAGCTATATTCAACGCCGTAATACTGCCTATCGTTTGGC
GTTTGATACTGCGCCAATTCAGCTGGATGTGCTACGCTTTGAGCAATTGCTGCAACGTGCCAACCACGCTAGCAATCCAC
TAGAAGCCATTAATTACTATCGCCAAGCACTCAATTTGTATGCTGGCGATTTTTTGGGCGATTGTTTGTATAGCGATTGG
GCGAATGCTGTGCGTGAGCAATTGCGCCATCATTTTGTGCAAGCTGCCTGCGAATTAGCCCAATTATTGTTGGCTGAACA
GCAACCAACCGAAGCCTTGGAGTGGGCCGAAGCCGCTTTACAAGCTGATCCCTATCAAGAAAACGCCTATCAAGCTAGCT
TTATGGCCTATGCCCAACTTGGCAATCGGGTGCAATTGCAACGCAGCTATCAACGTTGCCAACAAGTGCTTGAGCACGAT
TTGGGCTTAGCTCCAATGCCCACCACCAAAGCCGCCTACCAACGAGCCGAACAAACGCTGCATCAACTGTAA

Upstream 100 bases:

>100_bases
CTGCCTTTTGATTTTCATGGCTCTGCTATAATATTGGTTCAAGGCTTAGCCCACCCCACCTGCATCGACCAATCATTACC
TCACCGCTGAGGAGTAGCGT

Downstream 100 bases:

>100_bases
CTCAAGTGTAACTGGCCTTTGCTATGCTGAAGTGAGAGCTACTTCAATTGCATAGTCCAAAGGAGGACGCACGTAATGAA
GCGTTTGATTTCGATGTTGG

Product: SARP family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Activator Domain Protein; Response Regulator Receiver/SARP Domain-Containing Protein; Response Regulator Receiver And SARP Domain Protein; TPR Repeat-Containing Protein; SARP Family Transcriptional Regulator

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MQQVVRVFHQLLPDFVDHVSEQIVANHVPVYASLPQQHVKMALYNAIHSIEIDLAQGTTSTYADYWREVAVQRAQQGISP
VHSMLVTHLSTNVMTQFLKQALDREPEALAWWLERTHTIISLGMLVMTEARINALQQLGQLGSEPASSGIIIHEQPNLIL
PPSRWQTPQVLHLQAFGQMRAWRGSSEVLNWGRKSAIALLGILITQRGQWIQREQICDLFWPDLAPNQAEAHFKVALNAL
TAVLEPERPTRQASSYIQRRNTAYRLAFDTAPIQLDVLRFEQLLQRANHASNPLEAINYYRQALNLYAGDFLGDCLYSDW
ANAVREQLRHHFVQAACELAQLLLAEQQPTEALEWAEAALQADPYQENAYQASFMAYAQLGNRVQLQRSYQRCQQVLEHD
LGLAPMPTTKAAYQRAEQTLHQL

Sequences:

>Translated_423_residues
MQQVVRVFHQLLPDFVDHVSEQIVANHVPVYASLPQQHVKMALYNAIHSIEIDLAQGTTSTYADYWREVAVQRAQQGISP
VHSMLVTHLSTNVMTQFLKQALDREPEALAWWLERTHTIISLGMLVMTEARINALQQLGQLGSEPASSGIIIHEQPNLIL
PPSRWQTPQVLHLQAFGQMRAWRGSSEVLNWGRKSAIALLGILITQRGQWIQREQICDLFWPDLAPNQAEAHFKVALNAL
TAVLEPERPTRQASSYIQRRNTAYRLAFDTAPIQLDVLRFEQLLQRANHASNPLEAINYYRQALNLYAGDFLGDCLYSDW
ANAVREQLRHHFVQAACELAQLLLAEQQPTEALEWAEAALQADPYQENAYQASFMAYAQLGNRVQLQRSYQRCQQVLEHD
LGLAPMPTTKAAYQRAEQTLHQL
>Mature_423_residues
MQQVVRVFHQLLPDFVDHVSEQIVANHVPVYASLPQQHVKMALYNAIHSIEIDLAQGTTSTYADYWREVAVQRAQQGISP
VHSMLVTHLSTNVMTQFLKQALDREPEALAWWLERTHTIISLGMLVMTEARINALQQLGQLGSEPASSGIIIHEQPNLIL
PPSRWQTPQVLHLQAFGQMRAWRGSSEVLNWGRKSAIALLGILITQRGQWIQREQICDLFWPDLAPNQAEAHFKVALNAL
TAVLEPERPTRQASSYIQRRNTAYRLAFDTAPIQLDVLRFEQLLQRANHASNPLEAINYYRQALNLYAGDFLGDCLYSDW
ANAVREQLRHHFVQAACELAQLLLAEQQPTEALEWAEAALQADPYQENAYQASFMAYAQLGNRVQLQRSYQRCQQVLEHD
LGLAPMPTTKAAYQRAEQTLHQL

Specific function: Unknown

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48135; Mature: 48135

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQVVRVFHQLLPDFVDHVSEQIVANHVPVYASLPQQHVKMALYNAIHSIEIDLAQGTTS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHEEEECCCCCH
TYADYWREVAVQRAQQGISPVHSMLVTHLSTNVMTQFLKQALDREPEALAWWLERTHTII
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SLGMLVMTEARINALQQLGQLGSEPASSGIIIHEQPNLILPPSRWQTPQVLHLQAFGQMR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCCCCCCCCHHHHHHHHHH
AWRGSSEVLNWGRKSAIALLGILITQRGQWIQREQICDLFWPDLAPNQAEAHFKVALNAL
HCCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TAVLEPERPTRQASSYIQRRNTAYRLAFDTAPIQLDVLRFEQLLQRANHASNPLEAINYY
HHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
RQALNLYAGDFLGDCLYSDWANAVREQLRHHFVQAACELAQLLLAEQQPTEALEWAEAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
QADPYQENAYQASFMAYAQLGNRVQLQRSYQRCQQVLEHDLGLAPMPTTKAAYQRAEQTL
HCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
HQL
HCC
>Mature Secondary Structure
MQQVVRVFHQLLPDFVDHVSEQIVANHVPVYASLPQQHVKMALYNAIHSIEIDLAQGTTS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHEEEECCCCCH
TYADYWREVAVQRAQQGISPVHSMLVTHLSTNVMTQFLKQALDREPEALAWWLERTHTII
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SLGMLVMTEARINALQQLGQLGSEPASSGIIIHEQPNLILPPSRWQTPQVLHLQAFGQMR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEECCCCCCCCCCHHHHHHHHHH
AWRGSSEVLNWGRKSAIALLGILITQRGQWIQREQICDLFWPDLAPNQAEAHFKVALNAL
HCCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TAVLEPERPTRQASSYIQRRNTAYRLAFDTAPIQLDVLRFEQLLQRANHASNPLEAINYY
HHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
RQALNLYAGDFLGDCLYSDWANAVREQLRHHFVQAACELAQLLLAEQQPTEALEWAEAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
QADPYQENAYQASFMAYAQLGNRVQLQRSYQRCQQVLEHDLGLAPMPTTKAAYQRAEQTL
HCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
HQL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA