| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900297
Identifier: 159900297
GI number: 159900297
Start: 4748865
End: 4749863
Strand: Reverse
Name: 159900297
Synonym: Haur_3780
Alternate gene names: NA
Gene position: 4749863-4748865 (Counterclockwise)
Preceding gene: 159900307
Following gene: 159900290
Centisome position: 74.84
GC content: 45.15
Gene sequence:
>999_bases ATGAGTACTATCGCGTTTTCAAAAGTCAATCAAATCGTCAATGATCTCAAATCGGCTCAAGGTTCGGCGATCCTTGATCA TGTACGAAATGTTGCTAGCCTCAGTGAATCACATTCGCGGATTGTTGTGGCCCTGCTAGAGCTGCTTGAAGCACCCCAAA CCCCAGCCGATGCACATGCGAAAATACTTGAGGTTTTGCAAAAGGAGCCGCATAGTTCGATTATTAACCGTAGCTCTGCT TGGAAATTGGCGCTCCAAAAATATCTCGGCACAGCCCAACCAATCGTTTATCAGCCTAATCCAGCGCCCAGCTATCCAAC ACCAACACCAACACCGCCAGCAAATCAGCCACCAAGCCAACAACCAACGCCGCAGTTTGTGAGTGCCTCAGCAACCAGAC CTTGCCCGTATTGTGCTGAACACATTTTGGCTGATGCCAAAAAATGTCGTTTTTGTAATGAATGGTTGAGTGGCAGCAAA CCTGCATCTTCCAGTACTTCTCAGTCCAAAACCCAACGATTTTTAGAGGTTGAGCTTTCAAGTAGAGCGCTGATGATCAT TGGGTTTATCTTGTTTTTCCTCTTTTTCTCACCGTTTGTTGCGTGTGGGCCAATCGATATGTCGGCCAGCGAAATTACGG CGGCAAGCGTCGCTGAAACAGCCAATAATCGCAGTCAGACCTATTCGTATTATTCATCATCGCGCAATGATGATGATGAA GGTTCCATCATGTGGTTATCATTATTGCTCATCCCAGTCACTGCTGCAACACTCTTCATCACTGGTATGTCGATGGCGAA TCAGCTAGCCACAACTGGAGTTTACCCTGAAAAACCCGAACGAACGCAAGTATTGGTTATTATTACGGTATTTGTCTTAG TTGGTTTAGGGTTGTTAATTATGTTTCACCCAATTCTAGAATTACTTTGGGGTTATTACGCCGTTATGACCTGTTTGGCC ACTGCATTTATCGCCATTAAACGTTTAGATTATGTCTGA
Upstream 100 bases:
>100_bases TGCTTGGATACAGGAAAATAATCGAAAAATAGCATCTTAATCTTGTATACAAGCAACGGTTTGTCTCGATCAATCTGCCT AAAATAGGAGCGGAATAAGG
Downstream 100 bases:
>100_bases CCATGCTCAAGGTTCAATCAGGCCTTTGGTTCGTAGCTCAGCGTAAATTGCCTGATTATATGTATACATGGCCTGTTGTT GAGCCTCGCGGTCGCCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSTIAFSKVNQIVNDLKSAQGSAILDHVRNVASLSESHSRIVVALLELLEAPQTPADAHAKILEVLQKEPHSSIINRSSA WKLALQKYLGTAQPIVYQPNPAPSYPTPTPTPPANQPPSQQPTPQFVSASATRPCPYCAEHILADAKKCRFCNEWLSGSK PASSSTSQSKTQRFLEVELSSRALMIIGFILFFLFFSPFVACGPIDMSASEITAASVAETANNRSQTYSYYSSSRNDDDE GSIMWLSLLLIPVTAATLFITGMSMANQLATTGVYPEKPERTQVLVIITVFVLVGLGLLIMFHPILELLWGYYAVMTCLA TAFIAIKRLDYV
Sequences:
>Translated_332_residues MSTIAFSKVNQIVNDLKSAQGSAILDHVRNVASLSESHSRIVVALLELLEAPQTPADAHAKILEVLQKEPHSSIINRSSA WKLALQKYLGTAQPIVYQPNPAPSYPTPTPTPPANQPPSQQPTPQFVSASATRPCPYCAEHILADAKKCRFCNEWLSGSK PASSSTSQSKTQRFLEVELSSRALMIIGFILFFLFFSPFVACGPIDMSASEITAASVAETANNRSQTYSYYSSSRNDDDE GSIMWLSLLLIPVTAATLFITGMSMANQLATTGVYPEKPERTQVLVIITVFVLVGLGLLIMFHPILELLWGYYAVMTCLA TAFIAIKRLDYV >Mature_331_residues STIAFSKVNQIVNDLKSAQGSAILDHVRNVASLSESHSRIVVALLELLEAPQTPADAHAKILEVLQKEPHSSIINRSSAW KLALQKYLGTAQPIVYQPNPAPSYPTPTPTPPANQPPSQQPTPQFVSASATRPCPYCAEHILADAKKCRFCNEWLSGSKP ASSSTSQSKTQRFLEVELSSRALMIIGFILFFLFFSPFVACGPIDMSASEITAASVAETANNRSQTYSYYSSSRNDDDEG SIMWLSLLLIPVTAATLFITGMSMANQLATTGVYPEKPERTQVLVIITVFVLVGLGLLIMFHPILELLWGYYAVMTCLAT AFIAIKRLDYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36278; Mature: 36147
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIAFSKVNQIVNDLKSAQGSAILDHVRNVASLSESHSRIVVALLELLEAPQTPADAHA CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KILEVLQKEPHSSIINRSSAWKLALQKYLGTAQPIVYQPNPAPSYPTPTPTPPANQPPSQ HHHHHHHHCHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC QPTPQFVSASATRPCPYCAEHILADAKKCRFCNEWLSGSKPASSSTSQSKTQRFLEVELS CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC SRALMIIGFILFFLFFSPFVACGPIDMSASEITAASVAETANNRSQTYSYYSSSRNDDDE CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC GSIMWLSLLLIPVTAATLFITGMSMANQLATTGVYPEKPERTQVLVIITVFVLVGLGLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MFHPILELLWGYYAVMTCLATAFIAIKRLDYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STIAFSKVNQIVNDLKSAQGSAILDHVRNVASLSESHSRIVVALLELLEAPQTPADAHA CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KILEVLQKEPHSSIINRSSAWKLALQKYLGTAQPIVYQPNPAPSYPTPTPTPPANQPPSQ HHHHHHHHCHHHHHHCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC QPTPQFVSASATRPCPYCAEHILADAKKCRFCNEWLSGSKPASSSTSQSKTQRFLEVELS CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC SRALMIIGFILFFLFFSPFVACGPIDMSASEITAASVAETANNRSQTYSYYSSSRNDDDE CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC GSIMWLSLLLIPVTAATLFITGMSMANQLATTGVYPEKPERTQVLVIITVFVLVGLGLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MFHPILELLWGYYAVMTCLATAFIAIKRLDYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA