Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900307

Identifier: 159900307

GI number: 159900307

Start: 4759173

End: 4760096

Strand: Reverse

Name: 159900307

Synonym: Haur_3790

Alternate gene names: NA

Gene position: 4760096-4759173 (Counterclockwise)

Preceding gene: 159900308

Following gene: 159900297

Centisome position: 75.0

GC content: 50.76

Gene sequence:

>924_bases
ATGCAACTTGCAGTGAGCGCCAAACCTGAAACTCCGCTCCAACCCTATGTGGTGAGCGCCGATTATGCTCCTGGCACATT
AATTAAGCAACAAACCCTAGAATTGCCCATCTATCACTCACCCGAGCAAAAACTCTATGAATTGGAGATTGCAGGCTTTC
GGGTTGAGGATGCTGATCCTGAAACAGCTTTACGCCAAGCAGTGCCTGTGCTCAAAGCCTTGGTCAACTTGGCTCGCCTA
CCAACCTATGTGTTTATTGCCCGCCGTTCGCGCCAAGTCTATCCAATTTATAGCATTGGTGATGATGTGCTGGCGACAAC
CCCTGGTGGCCCCGTTTTTCGCCATGTTGAGCTTGCCAAAGTGCGTGAATATTTGAATGAATATCTGCATTTGACAGGCG
TGCTTGGCCGACCTGGAGCCAGCGATAAGCTACATGTGCGCGGTGTTGATGCCAAAACGCTGGGCTTGATTCGCCCGACT
TGCTATTTCAAAAAGCGGATTACTGGTCAAACCGATTTCTGGGCACCTGTGTTTGCCAACGAGCAAGAATTGTATACCTT
TGCAGCGAGCAAGCGCCATGCTGTGGCATTGAGCGAGCCAAACGCCTTGATGGGCTTGCATGCCTTGGTCGCCAAAGCCT
TGATCAAAGATAAACGGCTGTTCCACGAACACGATCTACGGGTTGATCGCATGTTTGCCGAGCCATGGGAAATTTGGAAA
AAAGATTTAACGGCGGTCAACGAGCCGATTGTGCTTGGTGATGTCAGCTTAAATGTCTATCAATATGGCCCAACCTGGCT
CGCCGTGGAAAAACGCCGCGATCGCGATGAACTACGCCCAAGCTTGTTCCTTGGCGAAAATCTCTACGATCTGACGGCGC
GAGTAACTGCCGACTTCAAACGGCGCGGCCTGATTGCTGAATAA

Upstream 100 bases:

>100_bases
CTCAATGATGCCAGAGCTTTCGTCAACCAAATAAACCAATTCAAGCATGCGCTGATTGAGCTAATCTCAGTCAGCGCATC
GTTAGCATCAAGGAGCAATT

Downstream 100 bases:

>100_bases
TCCACGAGCTGGCTTTCAAATGCTGGAAGCCAGCTATTTGGTAAACCCATATTTGGCGATCATCGCGCGAATTGTGGTGA
TATTACGGGCGGTTCCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MQLAVSAKPETPLQPYVVSADYAPGTLIKQQTLELPIYHSPEQKLYELEIAGFRVEDADPETALRQAVPVLKALVNLARL
PTYVFIARRSRQVYPIYSIGDDVLATTPGGPVFRHVELAKVREYLNEYLHLTGVLGRPGASDKLHVRGVDAKTLGLIRPT
CYFKKRITGQTDFWAPVFANEQELYTFAASKRHAVALSEPNALMGLHALVAKALIKDKRLFHEHDLRVDRMFAEPWEIWK
KDLTAVNEPIVLGDVSLNVYQYGPTWLAVEKRRDRDELRPSLFLGENLYDLTARVTADFKRRGLIAE

Sequences:

>Translated_307_residues
MQLAVSAKPETPLQPYVVSADYAPGTLIKQQTLELPIYHSPEQKLYELEIAGFRVEDADPETALRQAVPVLKALVNLARL
PTYVFIARRSRQVYPIYSIGDDVLATTPGGPVFRHVELAKVREYLNEYLHLTGVLGRPGASDKLHVRGVDAKTLGLIRPT
CYFKKRITGQTDFWAPVFANEQELYTFAASKRHAVALSEPNALMGLHALVAKALIKDKRLFHEHDLRVDRMFAEPWEIWK
KDLTAVNEPIVLGDVSLNVYQYGPTWLAVEKRRDRDELRPSLFLGENLYDLTARVTADFKRRGLIAE
>Mature_307_residues
MQLAVSAKPETPLQPYVVSADYAPGTLIKQQTLELPIYHSPEQKLYELEIAGFRVEDADPETALRQAVPVLKALVNLARL
PTYVFIARRSRQVYPIYSIGDDVLATTPGGPVFRHVELAKVREYLNEYLHLTGVLGRPGASDKLHVRGVDAKTLGLIRPT
CYFKKRITGQTDFWAPVFANEQELYTFAASKRHAVALSEPNALMGLHALVAKALIKDKRLFHEHDLRVDRMFAEPWEIWK
KDLTAVNEPIVLGDVSLNVYQYGPTWLAVEKRRDRDELRPSLFLGENLYDLTARVTADFKRRGLIAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34776; Mature: 34776

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLAVSAKPETPLQPYVVSADYAPGTLIKQQTLELPIYHSPEQKLYELEIAGFRVEDADP
CEEEECCCCCCCCCCEEEECCCCCCCEEHHHHCCCCCEECCCHHEEEEEEEEEEECCCCH
ETALRQAVPVLKALVNLARLPTYVFIARRSRQVYPIYSIGDDVLATTPGGPVFRHVELAK
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCEEEECCCCCHHHHHHHHH
VREYLNEYLHLTGVLGRPGASDKLHVRGVDAKTLGLIRPTCYFKKRITGQTDFWAPVFAN
HHHHHHHHHHHHEECCCCCCCCEEEEEECCHHHHHEECCHHHHHHHCCCCCCCCCCEECC
EQELYTFAASKRHAVALSEPNALMGLHALVAKALIKDKRLFHEHDLRVDRMFAEPWEIWK
CHHEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHH
KDLTAVNEPIVLGDVSLNVYQYGPTWLAVEKRRDRDELRPSLFLGENLYDLTARVTADFK
HHHHHCCCCEEEEEEEEEEEEECCEEEEEECCCCHHHCCCEEEECCCHHHHHHHHHHHHH
RRGLIAE
HCCCCCC
>Mature Secondary Structure
MQLAVSAKPETPLQPYVVSADYAPGTLIKQQTLELPIYHSPEQKLYELEIAGFRVEDADP
CEEEECCCCCCCCCCEEEECCCCCCCEEHHHHCCCCCEECCCHHEEEEEEEEEEECCCCH
ETALRQAVPVLKALVNLARLPTYVFIARRSRQVYPIYSIGDDVLATTPGGPVFRHVELAK
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCEEEECCCCCHHHHHHHHH
VREYLNEYLHLTGVLGRPGASDKLHVRGVDAKTLGLIRPTCYFKKRITGQTDFWAPVFAN
HHHHHHHHHHHHEECCCCCCCCEEEEEECCHHHHHEECCHHHHHHHCCCCCCCCCCEECC
EQELYTFAASKRHAVALSEPNALMGLHALVAKALIKDKRLFHEHDLRVDRMFAEPWEIWK
CHHEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHH
KDLTAVNEPIVLGDVSLNVYQYGPTWLAVEKRRDRDELRPSLFLGENLYDLTARVTADFK
HHHHHCCCCEEEEEEEEEEEEECCEEEEEECCCCHHHCCCEEEECCCHHHHHHHHHHHHH
RRGLIAE
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA