| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900287
Identifier: 159900287
GI number: 159900287
Start: 4738594
End: 4739310
Strand: Reverse
Name: 159900287
Synonym: Haur_3770
Alternate gene names: NA
Gene position: 4739310-4738594 (Counterclockwise)
Preceding gene: 159900288
Following gene: 159900286
Centisome position: 74.67
GC content: 50.91
Gene sequence:
>717_bases ATGGCAGCAATATTCATTGGAATTACGGTCATTTGTTATGCCGTAGCAATTTTATTATGGCTGCGCTTTCGCTCATACCG CTATTTGCTGGTGTTGATTGCAGGCCATTGCACCATCGTAGCCGAGCCGATTTTGCAACGTTTGTATAGCCTAACCTACC CCGATAATGTGGCAGCAATAGGCATCCTTGGCAATCCTGTGCCGATCTATGCGTTGCTGGCGGCTAGTTGGATTGGCTCG TTACCAGTGTTGTTGATGTATTTCGGTCAACAGCAACATTGGTGGACACGCCATTATCTGACAGGAGTGGTAGCGTATGT GGCGCTTGTGCTCTATCACATTATCATTCAAGGGTTAGCCGCCCGCACCGGGTTATGGCGTTATAGCCAAAATGTTGGGG CTTGGGGGATTAATTTCTATCTCTTGATGGCGGTTTTTGCTGGGCTAAGCTCATTGCTCTTGTTCTATGCTATGGTTGCC AGCCGCTATTATGCCGCCGAAATTGCTGTGCCAACTCTGGTTGCCGCCAGCATCGGATCGCCGTTGATCTGCTTTGGCTT GCTGGGAGCGCCGTTCTGGCTACCACGCTTAATCGGCAGCAGCGGCAATTTTACCAAGCCTGCGTTACTGGTGATTGCAG GGCTGGTGCTGTGGGTTGTGCATTTGGCCAGCGCGGGGATTCATGCTTCGCGCCAGCAACATGTGATTGAACGATGA
Upstream 100 bases:
>100_bases CCTGAGCGATCAACTTTGGACGATCAAACAAGGCCAAATTTTGATTTACGAGTACGATTGGTCATCAAGCGAACGTAAAA ATTAGCGCGAGGTTTGGTGC
Downstream 100 bases:
>100_bases CAGAACATAGAGCATAGAACATAAACATTTGAATAATCGACCTTCACGATAAGGAACTTTGATTATGACAAAGGTATTGG TGCTTCGCGCACCGGGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MAAIFIGITVICYAVAILLWLRFRSYRYLLVLIAGHCTIVAEPILQRLYSLTYPDNVAAIGILGNPVPIYALLAASWIGS LPVLLMYFGQQQHWWTRHYLTGVVAYVALVLYHIIIQGLAARTGLWRYSQNVGAWGINFYLLMAVFAGLSSLLLFYAMVA SRYYAAEIAVPTLVAASIGSPLICFGLLGAPFWLPRLIGSSGNFTKPALLVIAGLVLWVVHLASAGIHASRQQHVIER
Sequences:
>Translated_238_residues MAAIFIGITVICYAVAILLWLRFRSYRYLLVLIAGHCTIVAEPILQRLYSLTYPDNVAAIGILGNPVPIYALLAASWIGS LPVLLMYFGQQQHWWTRHYLTGVVAYVALVLYHIIIQGLAARTGLWRYSQNVGAWGINFYLLMAVFAGLSSLLLFYAMVA SRYYAAEIAVPTLVAASIGSPLICFGLLGAPFWLPRLIGSSGNFTKPALLVIAGLVLWVVHLASAGIHASRQQHVIER >Mature_237_residues AAIFIGITVICYAVAILLWLRFRSYRYLLVLIAGHCTIVAEPILQRLYSLTYPDNVAAIGILGNPVPIYALLAASWIGSL PVLLMYFGQQQHWWTRHYLTGVVAYVALVLYHIIIQGLAARTGLWRYSQNVGAWGINFYLLMAVFAGLSSLLLFYAMVAS RYYAAEIAVPTLVAASIGSPLICFGLLGAPFWLPRLIGSSGNFTKPALLVIAGLVLWVVHLASAGIHASRQQHVIER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26177; Mature: 26045
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAIFIGITVICYAVAILLWLRFRSYRYLLVLIAGHCTIVAEPILQRLYSLTYPDNVAAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE GILGNPVPIYALLAASWIGSLPVLLMYFGQQQHWWTRHYLTGVVAYVALVLYHIIIQGLA EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARTGLWRYSQNVGAWGINFYLLMAVFAGLSSLLLFYAMVASRYYAAEIAVPTLVAASIGS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLICFGLLGAPFWLPRLIGSSGNFTKPALLVIAGLVLWVVHLASAGIHASRQQHVIER HHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure AAIFIGITVICYAVAILLWLRFRSYRYLLVLIAGHCTIVAEPILQRLYSLTYPDNVAAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE GILGNPVPIYALLAASWIGSLPVLLMYFGQQQHWWTRHYLTGVVAYVALVLYHIIIQGLA EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARTGLWRYSQNVGAWGINFYLLMAVFAGLSSLLLFYAMVASRYYAAEIAVPTLVAASIGS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLICFGLLGAPFWLPRLIGSSGNFTKPALLVIAGLVLWVVHLASAGIHASRQQHVIER HHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA