Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900226

Identifier: 159900226

GI number: 159900226

Start: 4664340

End: 4665710

Strand: Reverse

Name: 159900226

Synonym: Haur_3709

Alternate gene names: NA

Gene position: 4665710-4664340 (Counterclockwise)

Preceding gene: 159900227

Following gene: 159900225

Centisome position: 73.52

GC content: 52.37

Gene sequence:

>1371_bases
ATGCGCACAATTATGTGGATTAAGAATCATCGTTGGCTGAGTTCGTTATTGGTAGCCGTGGTTTGCCTTGGTTTAGGCGG
GCTGGCAGGTTTGATGCCGTTGCGCTATTTGGCAGGCGTAGCCTTTTGCCTTGGCCTAACCGCAATTGGTTATGCTTGGG
TTTGGCTAATTAGCAAGCCCGACGAGTTGCGGGGTATGCTGCTGCTCTGTTTTGCAGCGATGGGCCTGCGTTGGGGAGCC
AGCTTTGCGCTCGAATTTCTCTGGCCCAGTTTTGAATCGCTGAGTGATGGCGCAGCGTATGGCCCGCATGCCATGACGAT
TGCCCAAGCTTGGAACGCTAATTATTTCGCTAGTTACGAGGCGGTGGTTTCAACCCCGGTTGGTGCGCCGGGCTATGTTT
ATTTTTCGGCAGTAATTTTTTGGTTATTTGGGCCAAATACCTTGCTGGTAAAATTGGCTAATGGCTTGTTTGCTGGCATG
GCGGCGGTGTACACGGCCAAATTAGGCAACCATTTTTTCGATCAACGGGTTGGGCGGTTTGCCGCGTTGTGGATGTTAAT
TATGCCATCGCTGATTTTGTGGACTTCGCAAAATCTCAAAGATAGCGCGGTGGTGCTGCTCTCAGTCTGGATTTTGTATG
TAGCCAGTCAAGGTTTGCGCTCGTCGTTATGGCAAATTCCATTGTTGGTGCTGCTGATTGGGGCGTTGATGAGCGTGCGG
CGCGAAACCTCAATTGGCATTGCTTTGATGATTGCCTTGACAATTGGCTTTCAGCAAACCCGTCATTGGCTAACCCGCCT
GAGCTTGAGCGCGATCACGATTGTGGCCTTGGGCTTGGTGCTTTCGAGCAGCGGCTATGGCTTTTTGGGCAGCGATTATC
TGCAAGAGCGGCTTTCGCTCAGCGCAATTAGCGAAAAACGCGAGGCCAACTCAACCGGCACAGGCACAATTGAAAATACG
ATTGATACGACCACGCCGCTGGGTTTTGCCCGCTACTTGCCAATTGCCTTGATTAATTTCTGGTTGCGACCGTGGCCGTG
GGAAGCTACCAAGAGCACCGCCCAATTGCTGACCATTCCCGAAGCGGCGCTGTTGTGGTATCCGTTGTGGGTTTTGGCGA
TGATTGGCATGATCTTGGCGTGGCGTAGCCGTTGGCGCGAAACAATGTTGCTCTGGCTCTATCTGCTGGCTGGCAGTGCG
GCGGCGGCTCCGCAGTATGGCAATTTTGGCACGGCCTATCGCCATCGGGTGCAGCTGTGGCCAATTTTCTTTTTGTTTGC
AGGCTATTGTTGGTATCGTTGGCGCGATGCTAGAGTTGAGCAACGTCAGGCGTTGTTGACCCGCTATGTGCAGAGTATCA
AGCAAATTTAG

Upstream 100 bases:

>100_bases
TGCCACGCGCATTGGGCTGGTACAATGAACGCTGGACATCAACTTTGGACATTGCTCACCTTAGAATTATGGCTACAAAC
TCATCACCAAATGAGGCCAT

Downstream 100 bases:

>100_bases
GCTGTAGGCTGATGGCTATCGGCTATCGGAACGATGATGATCATTCCAATGATCGGCAATTCAAAAGCCAATAGCCCATA
GCCGATAGCCTATAACGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MRTIMWIKNHRWLSSLLVAVVCLGLGGLAGLMPLRYLAGVAFCLGLTAIGYAWVWLISKPDELRGMLLLCFAAMGLRWGA
SFALEFLWPSFESLSDGAAYGPHAMTIAQAWNANYFASYEAVVSTPVGAPGYVYFSAVIFWLFGPNTLLVKLANGLFAGM
AAVYTAKLGNHFFDQRVGRFAALWMLIMPSLILWTSQNLKDSAVVLLSVWILYVASQGLRSSLWQIPLLVLLIGALMSVR
RETSIGIALMIALTIGFQQTRHWLTRLSLSAITIVALGLVLSSSGYGFLGSDYLQERLSLSAISEKREANSTGTGTIENT
IDTTTPLGFARYLPIALINFWLRPWPWEATKSTAQLLTIPEAALLWYPLWVLAMIGMILAWRSRWRETMLLWLYLLAGSA
AAAPQYGNFGTAYRHRVQLWPIFFLFAGYCWYRWRDARVEQRQALLTRYVQSIKQI

Sequences:

>Translated_456_residues
MRTIMWIKNHRWLSSLLVAVVCLGLGGLAGLMPLRYLAGVAFCLGLTAIGYAWVWLISKPDELRGMLLLCFAAMGLRWGA
SFALEFLWPSFESLSDGAAYGPHAMTIAQAWNANYFASYEAVVSTPVGAPGYVYFSAVIFWLFGPNTLLVKLANGLFAGM
AAVYTAKLGNHFFDQRVGRFAALWMLIMPSLILWTSQNLKDSAVVLLSVWILYVASQGLRSSLWQIPLLVLLIGALMSVR
RETSIGIALMIALTIGFQQTRHWLTRLSLSAITIVALGLVLSSSGYGFLGSDYLQERLSLSAISEKREANSTGTGTIENT
IDTTTPLGFARYLPIALINFWLRPWPWEATKSTAQLLTIPEAALLWYPLWVLAMIGMILAWRSRWRETMLLWLYLLAGSA
AAAPQYGNFGTAYRHRVQLWPIFFLFAGYCWYRWRDARVEQRQALLTRYVQSIKQI
>Mature_456_residues
MRTIMWIKNHRWLSSLLVAVVCLGLGGLAGLMPLRYLAGVAFCLGLTAIGYAWVWLISKPDELRGMLLLCFAAMGLRWGA
SFALEFLWPSFESLSDGAAYGPHAMTIAQAWNANYFASYEAVVSTPVGAPGYVYFSAVIFWLFGPNTLLVKLANGLFAGM
AAVYTAKLGNHFFDQRVGRFAALWMLIMPSLILWTSQNLKDSAVVLLSVWILYVASQGLRSSLWQIPLLVLLIGALMSVR
RETSIGIALMIALTIGFQQTRHWLTRLSLSAITIVALGLVLSSSGYGFLGSDYLQERLSLSAISEKREANSTGTGTIENT
IDTTTPLGFARYLPIALINFWLRPWPWEATKSTAQLLTIPEAALLWYPLWVLAMIGMILAWRSRWRETMLLWLYLLAGSA
AAAPQYGNFGTAYRHRVQLWPIFFLFAGYCWYRWRDARVEQRQALLTRYVQSIKQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51085; Mature: 51085

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA