| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900202
Identifier: 159900202
GI number: 159900202
Start: 4638009
End: 4638590
Strand: Direct
Name: 159900202
Synonym: Haur_3685
Alternate gene names: NA
Gene position: 4638009-4638590 (Clockwise)
Preceding gene: 159900201
Following gene: 159900203
Centisome position: 73.08
GC content: 50.52
Gene sequence:
>582_bases ATGGCGGTCACAAGTCGTAATTTACGCACAAATTATCCACGCCAATCGATGGGGCGACGACTTGTCCGAGTTACAGCTCC GCAACAAGCGCATCGGCGCACTCAAACGCAACAAACACCAACGACGCTGCCCGCAATTTGGATTAATCGGTTGCTTTGGG CTGGGGTAGTGGTACTTTTAGCCCTACTTTTAGGCACACTCAGCGGTATTTTTGGGGTCTGGATTGACGATTTACGCTAT GGCCGACCACGCGTTTCACACTTAGTTGCCAATGTCGGCCACGAAAGCGCTCAAGGCTTGCCCAGCGAATTTATGGCGAT CAATTTGAATCGGCGGGTGGTTGTGTTAGAATTCCCTGGAGGCGATGCAAGCAAAGCTCGCACGCTAATTGGCCCATATC TCTTTGGCGCAGGCGAAGATCTGACCCCCATCACCCTTTCGACCCACGATCTGAACAACGATGCCCGTCCGGAGCTATTG GTCAACATCAAAAATGAACAACTAATTTATATCAACCAAGCCGATGGCTTTCGGATGATCACTGCTGCGGAACAAGCTAG TTTGTTGAACCAGCAACAATGA
Upstream 100 bases:
>100_bases CATTACATAAACTTGTGACAATCATTGACATAGAACAAAAGTTCTACTATAATTTTCTTCAGTGGTAAACGAGCATGTAC GTTTAGCCTGAGGAGGCATT
Downstream 100 bases:
>100_bases GTGGTCTCCGTGCCAGGAGAACCCATCCATGTTATATGGTTTTGATGATTTTTCTTCGCGACGACGCACCTTCTTCTTAA TTGCGCTGGCGGCTGCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAVTSRNLRTNYPRQSMGRRLVRVTAPQQAHRRTQTQQTPTTLPAIWINRLLWAGVVVLLALLLGTLSGIFGVWIDDLRY GRPRVSHLVANVGHESAQGLPSEFMAINLNRRVVVLEFPGGDASKARTLIGPYLFGAGEDLTPITLSTHDLNNDARPELL VNIKNEQLIYINQADGFRMITAAEQASLLNQQQ
Sequences:
>Translated_193_residues MAVTSRNLRTNYPRQSMGRRLVRVTAPQQAHRRTQTQQTPTTLPAIWINRLLWAGVVVLLALLLGTLSGIFGVWIDDLRY GRPRVSHLVANVGHESAQGLPSEFMAINLNRRVVVLEFPGGDASKARTLIGPYLFGAGEDLTPITLSTHDLNNDARPELL VNIKNEQLIYINQADGFRMITAAEQASLLNQQQ >Mature_192_residues AVTSRNLRTNYPRQSMGRRLVRVTAPQQAHRRTQTQQTPTTLPAIWINRLLWAGVVVLLALLLGTLSGIFGVWIDDLRYG RPRVSHLVANVGHESAQGLPSEFMAINLNRRVVVLEFPGGDASKARTLIGPYLFGAGEDLTPITLSTHDLNNDARPELLV NIKNEQLIYINQADGFRMITAAEQASLLNQQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21447; Mature: 21316
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTSRNLRTNYPRQSMGRRLVRVTAPQQAHRRTQTQQTPTTLPAIWINRLLWAGVVVLL CCCCCCCCCCCCCHHHHCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH ALLLGTLSGIFGVWIDDLRYGRPRVSHLVANVGHESAQGLPSEFMAINLNRRVVVLEFPG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCHHEEEECCCEEEEEECCC GDASKARTLIGPYLFGAGEDLTPITLSTHDLNNDARPELLVNIKNEQLIYINQADGFRMI CCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCEEEE TAAEQASLLNQQQ HHHHHHHHHCCCC >Mature Secondary Structure AVTSRNLRTNYPRQSMGRRLVRVTAPQQAHRRTQTQQTPTTLPAIWINRLLWAGVVVLL CCCCCCCCCCCCHHHHCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH ALLLGTLSGIFGVWIDDLRYGRPRVSHLVANVGHESAQGLPSEFMAINLNRRVVVLEFPG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCHHEEEECCCEEEEEECCC GDASKARTLIGPYLFGAGEDLTPITLSTHDLNNDARPELLVNIKNEQLIYINQADGFRMI CCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCEEEE TAAEQASLLNQQQ HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA