| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900201
Identifier: 159900201
GI number: 159900201
Start: 4637046
End: 4637618
Strand: Direct
Name: 159900201
Synonym: Haur_3684
Alternate gene names: NA
Gene position: 4637046-4637618 (Clockwise)
Preceding gene: 159900200
Following gene: 159900202
Centisome position: 73.06
GC content: 47.47
Gene sequence:
>573_bases ATGGCCGATCAATCAGTGCCCTACAGCCATAGTGAATTGATGATTGCTTTAGAACGCGATGTTGCAACGGTTAGCGACAC AATCTTGGCCTTGACCCCTGAGGAATGTTTTGCTCATCCGGAAGGGGTTTGGTCACCGGCTGAGAATGTGTTGCATCTTC AACAATTGACCAAAGTTTTGACCCTGGCGTTTTATGTACCACGGTTCACGCTTAGCACGTTGTTTGGCAAGCCCAAGCAT CAATCGACCGATTATTTAACGATCAAAACTCGTTATCAAGCAGCAATTGCCAAGGGATTTAGCGCTCCGGCCTATTCGAT TCCAGCCAAACCGCAAGGCTCAATCAGCCTGCAAGCGCAACAAGCCTTGGTTGCACAATGGCAAAAACTCAATCAACAGC TGATCGAAACGCTTTTTCATTGGGATGAAGCAGCACTTGATCAGTATCAATTGCTGCATCCAGCTTTGGGCAAATTAACC GTGCGTGAGATGTTATTTTTTATGCATGCCCACACCGCGCACCATCTCAACGATCTTGCCAAATTGCGCCAAAACCACGT TGCCAGCGAATAG
Upstream 100 bases:
>100_bases ACAAGGCTTTTTGTATCAACGGGTTCAGCAATTACAACAACAACTTGGCAGCATGCAACCAGCAATGGTTCATCAGCGTT CTATTTAAAAAGGAGTTGCC
Downstream 100 bases:
>100_bases TTCCATTCCCTCACCCCCAAGCCCCTCTCCCGCTGCCGCAGGCGAGGGAAGTTTAGATTTGAGGGTGACGAGTATTAATT AGCAGTTTTGCTTATACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MADQSVPYSHSELMIALERDVATVSDTILALTPEECFAHPEGVWSPAENVLHLQQLTKVLTLAFYVPRFTLSTLFGKPKH QSTDYLTIKTRYQAAIAKGFSAPAYSIPAKPQGSISLQAQQALVAQWQKLNQQLIETLFHWDEAALDQYQLLHPALGKLT VREMLFFMHAHTAHHLNDLAKLRQNHVASE
Sequences:
>Translated_190_residues MADQSVPYSHSELMIALERDVATVSDTILALTPEECFAHPEGVWSPAENVLHLQQLTKVLTLAFYVPRFTLSTLFGKPKH QSTDYLTIKTRYQAAIAKGFSAPAYSIPAKPQGSISLQAQQALVAQWQKLNQQLIETLFHWDEAALDQYQLLHPALGKLT VREMLFFMHAHTAHHLNDLAKLRQNHVASE >Mature_189_residues ADQSVPYSHSELMIALERDVATVSDTILALTPEECFAHPEGVWSPAENVLHLQQLTKVLTLAFYVPRFTLSTLFGKPKHQ STDYLTIKTRYQAAIAKGFSAPAYSIPAKPQGSISLQAQQALVAQWQKLNQQLIETLFHWDEAALDQYQLLHPALGKLTV REMLFFMHAHTAHHLNDLAKLRQNHVASE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21384; Mature: 21253
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQSVPYSHSELMIALERDVATVSDTILALTPEECFAHPEGVWSPAENVLHLQQLTKVL CCCCCCCCCCCCEEEEHHHHHHHHHHHHEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHH TLAFYVPRFTLSTLFGKPKHQSTDYLTIKTRYQAAIAKGFSAPAYSIPAKPQGSISLQAQ HHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHH QALVAQWQKLNQQLIETLFHWDEAALDQYQLLHPALGKLTVREMLFFMHAHTAHHLNDLA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLRQNHVASE HHHHHCCCCC >Mature Secondary Structure ADQSVPYSHSELMIALERDVATVSDTILALTPEECFAHPEGVWSPAENVLHLQQLTKVL CCCCCCCCCCCEEEEHHHHHHHHHHHHEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHH TLAFYVPRFTLSTLFGKPKHQSTDYLTIKTRYQAAIAKGFSAPAYSIPAKPQGSISLQAQ HHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHH QALVAQWQKLNQQLIETLFHWDEAALDQYQLLHPALGKLTVREMLFFMHAHTAHHLNDLA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLRQNHVASE HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA