Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900203

Identifier: 159900203

GI number: 159900203

Start: 4638619

End: 4639257

Strand: Direct

Name: 159900203

Synonym: Haur_3686

Alternate gene names: NA

Gene position: 4638619-4639257 (Clockwise)

Preceding gene: 159900202

Following gene: 159900204

Centisome position: 73.09

GC content: 47.26

Gene sequence:

>639_bases
ATGTTATATGGTTTTGATGATTTTTCTTCGCGACGACGCACCTTCTTCTTAATTGCGCTGGCGGCTGCTTTGGTCTGGAT
GATCGTGCAGTTTCGCGGAAGCAGCAACGTCTTTTATAGCTCGATGAGTGCTCCAGGCCGACCCGCCCAATCTGCTAGTG
GTAATCTTGCTGGCTCGTTTGGGGCGATCGACGGCGATAGTATTTTGGGTGTACCAACCATTTCTGCTGCAAAAATCGAT
CAGGTGCTCAGTTCTTACAATTCTCCAGCAACTGGCAAGGGTCAAGTGATTTATGATATGGGTATCAAGTATGGCATCGA
TCCAGCCTACTGCTTAGCCTTTTTCATTCACGAATCGACTGCTGGGACCCAAGGTGTTGCACGGGTCACGCAATCGATTG
GCAATATTCGCACCACCGCTGGTTATGAAGATTACCAAGGCTATCGCAAATACCCAAGCTGGGAAGCTGGCATCGAAGAT
TGGTACAAGCTGATTCGCAATTTATATATCGACGAATGGCAATTGACAACAATTCAAGATATTATCCCAGTGTATGCGCC
ACCAGTTGAAAACGACACTAATCATTATGTCGAAACGGTGCGCACATTGGTCAACTCATGGAGAGCAGCAGGTTCATGA

Upstream 100 bases:

>100_bases
ATCAACCAAGCCGATGGCTTTCGGATGATCACTGCTGCGGAACAAGCTAGTTTGTTGAACCAGCAACAATGAGTGGTCTC
CGTGCCAGGAGAACCCATCC

Downstream 100 bases:

>100_bases
ATTGGTATGATTTGAGCGATTATGGCAATAACTATAAACGTGGTGCAGTCGCCCTCGGCTTGATTGTGGTGCTCTTTTTG
TTGCTCAATCGTCCTTCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MLYGFDDFSSRRRTFFLIALAAALVWMIVQFRGSSNVFYSSMSAPGRPAQSASGNLAGSFGAIDGDSILGVPTISAAKID
QVLSSYNSPATGKGQVIYDMGIKYGIDPAYCLAFFIHESTAGTQGVARVTQSIGNIRTTAGYEDYQGYRKYPSWEAGIED
WYKLIRNLYIDEWQLTTIQDIIPVYAPPVENDTNHYVETVRTLVNSWRAAGS

Sequences:

>Translated_212_residues
MLYGFDDFSSRRRTFFLIALAAALVWMIVQFRGSSNVFYSSMSAPGRPAQSASGNLAGSFGAIDGDSILGVPTISAAKID
QVLSSYNSPATGKGQVIYDMGIKYGIDPAYCLAFFIHESTAGTQGVARVTQSIGNIRTTAGYEDYQGYRKYPSWEAGIED
WYKLIRNLYIDEWQLTTIQDIIPVYAPPVENDTNHYVETVRTLVNSWRAAGS
>Mature_212_residues
MLYGFDDFSSRRRTFFLIALAAALVWMIVQFRGSSNVFYSSMSAPGRPAQSASGNLAGSFGAIDGDSILGVPTISAAKID
QVLSSYNSPATGKGQVIYDMGIKYGIDPAYCLAFFIHESTAGTQGVARVTQSIGNIRTTAGYEDYQGYRKYPSWEAGIED
WYKLIRNLYIDEWQLTTIQDIIPVYAPPVENDTNHYVETVRTLVNSWRAAGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23360; Mature: 23360

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYGFDDFSSRRRTFFLIALAAALVWMIVQFRGSSNVFYSSMSAPGRPAQSASGNLAGSF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC
GAIDGDSILGVPTISAAKIDQVLSSYNSPATGKGQVIYDMGIKYGIDPAYCLAFFIHEST
CCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCC
AGTQGVARVTQSIGNIRTTAGYEDYQGYRKYPSWEAGIEDWYKLIRNLYIDEWQLTTIQD
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
IIPVYAPPVENDTNHYVETVRTLVNSWRAAGS
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLYGFDDFSSRRRTFFLIALAAALVWMIVQFRGSSNVFYSSMSAPGRPAQSASGNLAGSF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCC
GAIDGDSILGVPTISAAKIDQVLSSYNSPATGKGQVIYDMGIKYGIDPAYCLAFFIHEST
CCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCC
AGTQGVARVTQSIGNIRTTAGYEDYQGYRKYPSWEAGIEDWYKLIRNLYIDEWQLTTIQD
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
IIPVYAPPVENDTNHYVETVRTLVNSWRAAGS
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA