| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900189
Identifier: 159900189
GI number: 159900189
Start: 4616105
End: 4617241
Strand: Direct
Name: 159900189
Synonym: Haur_3672
Alternate gene names: NA
Gene position: 4616105-4617241 (Clockwise)
Preceding gene: 159900188
Following gene: 159900190
Centisome position: 72.73
GC content: 37.99
Gene sequence:
>1137_bases ATGGCCGAACTTCAGCTTAATTCATTAATCATTCAGAATTTTCGGGGCTTCGAAAATTTTCAGATCAACCAACTTGGACG GGTAAACCTGATTGTTGGTAAAAATAATATTGGCAAAACTTCTCTGTTAGAGGCGATTTGGCTGTATGCCAACCGTGGTT CAAGCGTGACAATCTACGATATTTTGAAAGATCGCGACGAGCATCGGGTGTTTAATCTGAACCCTACTACCGAACAAACC CAACAAGAAATTCTTGCCATCAAAAATTTGTTTTATCAACGCAATGACTTTACCGACCAGACCCAAACGCTGCAAATTGG CAATACTCGCGAGAATTATCTCCAACTTCAGGCGCGTTGGTATCAAGTTGAGATGGATGATCACGATAATTTAACTCCCA AACCAATTAAATATGCAGATCTTGATTTTAGCGATGAGCCATTTTTTGGTGTCGAAGTAGTAATGTATAGAAATGGTAAA TCCGCTCAAAAAATTAGAAAATATCCAATCTATCGCCAAAATCCTACCCAGAATTGGAATGAAATTGTTTGTAACTTTAT TACATCAAATTTTGTTCATCGCTATCAGCTTAGCAAATGGCGTGATACAACCCTGATTGAAGGACTTGAGAATTATGCAC TTGAGGCATTGCAAATTATTGAACCTTCGATTGAAGCGATTAATATGATTACGGTTGAAGAAAAAGTAACAACCGATTTC TCGATAAGCTCAAGGTTGGTTCCCATTCCTGTGGTTAGAATGGTCGGGGCAACCAAATTTATTCCTTTGCGCAGCTTAGG CGATGGTTTGAATCGCATGCTGATTTTGATTTTAGCAATGGTCAATGCCAAAGATGGCTTTGTATTAATTGATGAAATTG AAAATGGCCTGCACTATTCAATCTATCCTAATGTTTGGAAATTGATTTTTAAGCTAGCTGAAACCCTAAATGTTCAAGTA TTTGCGACAACTCATAGCAAAGAATGTTTAAATGCCTTCAATAAAACCAATAAAGATCAAGCCGCTCAATCAGGGCGATT AATTCGCTTGGGTCGCAAAAAAGGCAACATCGTTGCAACTGAATATAATCAAAAAGATATGCAAGTTATCCTCGAACGTG ATATTGAGGTACGCTAG
Upstream 100 bases:
>100_bases CGCGGCTACACCCGCCCCGCAAGCTGCTAGCATTCAATAGACTCGCAGCATCCGCTATGGTATGATCGCTACGCTATACT GCCAAAACGAGGGTGTCACG
Downstream 100 bases:
>100_bases CAATGGGACAGATTAATTTAATTCTAGTTGAGGGCAGCAACGACAAATTTATTTTAATCGAATTAATCAAGCGTAGACTT AACTCAATCATCAATAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MAELQLNSLIIQNFRGFENFQINQLGRVNLIVGKNNIGKTSLLEAIWLYANRGSSVTIYDILKDRDEHRVFNLNPTTEQT QQEILAIKNLFYQRNDFTDQTQTLQIGNTRENYLQLQARWYQVEMDDHDNLTPKPIKYADLDFSDEPFFGVEVVMYRNGK SAQKIRKYPIYRQNPTQNWNEIVCNFITSNFVHRYQLSKWRDTTLIEGLENYALEALQIIEPSIEAINMITVEEKVTTDF SISSRLVPIPVVRMVGATKFIPLRSLGDGLNRMLILILAMVNAKDGFVLIDEIENGLHYSIYPNVWKLIFKLAETLNVQV FATTHSKECLNAFNKTNKDQAAQSGRLIRLGRKKGNIVATEYNQKDMQVILERDIEVR
Sequences:
>Translated_378_residues MAELQLNSLIIQNFRGFENFQINQLGRVNLIVGKNNIGKTSLLEAIWLYANRGSSVTIYDILKDRDEHRVFNLNPTTEQT QQEILAIKNLFYQRNDFTDQTQTLQIGNTRENYLQLQARWYQVEMDDHDNLTPKPIKYADLDFSDEPFFGVEVVMYRNGK SAQKIRKYPIYRQNPTQNWNEIVCNFITSNFVHRYQLSKWRDTTLIEGLENYALEALQIIEPSIEAINMITVEEKVTTDF SISSRLVPIPVVRMVGATKFIPLRSLGDGLNRMLILILAMVNAKDGFVLIDEIENGLHYSIYPNVWKLIFKLAETLNVQV FATTHSKECLNAFNKTNKDQAAQSGRLIRLGRKKGNIVATEYNQKDMQVILERDIEVR >Mature_377_residues AELQLNSLIIQNFRGFENFQINQLGRVNLIVGKNNIGKTSLLEAIWLYANRGSSVTIYDILKDRDEHRVFNLNPTTEQTQ QEILAIKNLFYQRNDFTDQTQTLQIGNTRENYLQLQARWYQVEMDDHDNLTPKPIKYADLDFSDEPFFGVEVVMYRNGKS AQKIRKYPIYRQNPTQNWNEIVCNFITSNFVHRYQLSKWRDTTLIEGLENYALEALQIIEPSIEAINMITVEEKVTTDFS ISSRLVPIPVVRMVGATKFIPLRSLGDGLNRMLILILAMVNAKDGFVLIDEIENGLHYSIYPNVWKLIFKLAETLNVQVF ATTHSKECLNAFNKTNKDQAAQSGRLIRLGRKKGNIVATEYNQKDMQVILERDIEVR
Specific function: Unknown
COG id: COG1106
COG function: function code R; Predicted ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43808; Mature: 43677
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELQLNSLIIQNFRGFENFQINQLGRVNLIVGKNNIGKTSLLEAIWLYANRGSSVTIYD CCCCHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCCCHHHHHHHHHHEECCCCEEEEEE ILKDRDEHRVFNLNPTTEQTQQEILAIKNLFYQRNDFTDQTQTLQIGNTRENYLQLQARW ECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHEEEEEEE YQVEMDDHDNLTPKPIKYADLDFSDEPFFGVEVVMYRNGKSAQKIRKYPIYRQNPTQNWN EEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCHH EIVCNFITSNFVHRYQLSKWRDTTLIEGLENYALEALQIIEPSIEAINMITVEEKVTTDF HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECHHHCCCC SISSRLVPIPVVRMVGATKFIPLRSLGDGLNRMLILILAMVNAKDGFVLIDEIENGLHYS CCCCCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEE IYPNVWKLIFKLAETLNVQVFATTHSKECLNAFNKTNKDQAAQSGRLIRLGRKKGNIVAT ECHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHCCCCHHHHHHCCCEEEEECCCCCEEEE EYNQKDMQVILERDIEVR ECCCHHHHHHHHCCCCCC >Mature Secondary Structure AELQLNSLIIQNFRGFENFQINQLGRVNLIVGKNNIGKTSLLEAIWLYANRGSSVTIYD CCCHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCCCHHHHHHHHHHEECCCCEEEEEE ILKDRDEHRVFNLNPTTEQTQQEILAIKNLFYQRNDFTDQTQTLQIGNTRENYLQLQARW ECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHEEEEEEE YQVEMDDHDNLTPKPIKYADLDFSDEPFFGVEVVMYRNGKSAQKIRKYPIYRQNPTQNWN EEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCHH EIVCNFITSNFVHRYQLSKWRDTTLIEGLENYALEALQIIEPSIEAINMITVEEKVTTDF HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECHHHCCCC SISSRLVPIPVVRMVGATKFIPLRSLGDGLNRMLILILAMVNAKDGFVLIDEIENGLHYS CCCCCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEE IYPNVWKLIFKLAETLNVQVFATTHSKECLNAFNKTNKDQAAQSGRLIRLGRKKGNIVAT ECHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHCCCCHHHHHHCCCEEEEECCCCCEEEE EYNQKDMQVILERDIEVR ECCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA