| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900190
Identifier: 159900190
GI number: 159900190
Start: 4617244
End: 4618032
Strand: Direct
Name: 159900190
Synonym: Haur_3673
Alternate gene names: NA
Gene position: 4617244-4618032 (Clockwise)
Preceding gene: 159900189
Following gene: 159900191
Centisome position: 72.75
GC content: 38.4
Gene sequence:
>789_bases ATGGGACAGATTAATTTAATTCTAGTTGAGGGCAGCAACGACAAATTTATTTTAATCGAATTAATCAAGCGTAGACTTAA CTCAATCATCAATAATCCAAGTCAAGCCGATCATGATAAAGCATTAATTATTAAACATAATGATACCCGCTTACGAATCG AACAATCGGGCAGTAAAGAAAAAGCTATCCACGATTTAAAATTTATATTCAGTGGTTTTAATGATAGCCAGCAACAAACC CACGACAAAATCTCAATTATCGAAGAACTACGGGTTCGTTTAATGCAACAAGACGATGAAAATGATGATATTGTGATTGG CTTAATTCTTGATGCCGATAAGGATGCACAAAAAACCTATGCTCAAGTCCATACAATATTAGCTGAAAAGTACCCTGATG TAGTGCCAATCCTTCCTGTCGAGGGTTTAGTATTGCACGCCGTTGATCAACCACGCATCGGCGTGTGGATTATGCCAAAT AACCGCGATCAAGGCACAATTGAAGATTTTTTTATCAGCCTGATTCGGCCTGATGATGCGCTCTGGCAAGAAGTGCAACA TACAATTAGCGCTGTCCGTAAAAAAGCCGACTTAACATCGCTTATGTTTACCGAAAAAGATCTACGTAAAGCTCAAATAT TCACTTGGTTGGCTTGGCAGAAAAATCCAGTTGTTCAAATGAGCAAAGCCATTGAGCGCAACCACGCCGCTTTAAATTTA AATTGTGAGCCAGTTGAATTATTTATCAATTGGCTCACTCGTTTGTTCGATTTACCTGATTCAGCTTAA
Upstream 100 bases:
>100_bases TAATTCGCTTGGGTCGCAAAAAAGGCAACATCGTTGCAACTGAATATAATCAAAAAGATATGCAAGTTATCCTCGAACGT GATATTGAGGTACGCTAGCA
Downstream 100 bases:
>100_bases TTGGAGATATTTCTATGCCACGCTGGGCACTTTTGGCCGATGTTCATGGCAATCGCTTGGCCTTAGCCGCTGTTTTGGCC GATCTCGCTCAACGCCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MGQINLILVEGSNDKFILIELIKRRLNSIINNPSQADHDKALIIKHNDTRLRIEQSGSKEKAIHDLKFIFSGFNDSQQQT HDKISIIEELRVRLMQQDDENDDIVIGLILDADKDAQKTYAQVHTILAEKYPDVVPILPVEGLVLHAVDQPRIGVWIMPN NRDQGTIEDFFISLIRPDDALWQEVQHTISAVRKKADLTSLMFTEKDLRKAQIFTWLAWQKNPVVQMSKAIERNHAALNL NCEPVELFINWLTRLFDLPDSA
Sequences:
>Translated_262_residues MGQINLILVEGSNDKFILIELIKRRLNSIINNPSQADHDKALIIKHNDTRLRIEQSGSKEKAIHDLKFIFSGFNDSQQQT HDKISIIEELRVRLMQQDDENDDIVIGLILDADKDAQKTYAQVHTILAEKYPDVVPILPVEGLVLHAVDQPRIGVWIMPN NRDQGTIEDFFISLIRPDDALWQEVQHTISAVRKKADLTSLMFTEKDLRKAQIFTWLAWQKNPVVQMSKAIERNHAALNL NCEPVELFINWLTRLFDLPDSA >Mature_261_residues GQINLILVEGSNDKFILIELIKRRLNSIINNPSQADHDKALIIKHNDTRLRIEQSGSKEKAIHDLKFIFSGFNDSQQQTH DKISIIEELRVRLMQQDDENDDIVIGLILDADKDAQKTYAQVHTILAEKYPDVVPILPVEGLVLHAVDQPRIGVWIMPNN RDQGTIEDFFISLIRPDDALWQEVQHTISAVRKKADLTSLMFTEKDLRKAQIFTWLAWQKNPVVQMSKAIERNHAALNLN CEPVELFINWLTRLFDLPDSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30118; Mature: 29987
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQINLILVEGSNDKFILIELIKRRLNSIINNPSQADHDKALIIKHNDTRLRIEQSGSKE CCCEEEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCCHH KAIHDLKFIFSGFNDSQQQTHDKISIIEELRVRLMQQDDENDDIVIGLILDADKDAQKTY HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHH AQVHTILAEKYPDVVPILPVEGLVLHAVDQPRIGVWIMPNNRDQGTIEDFFISLIRPDDA HHHHHHHHHHCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHCCCCHH LWQEVQHTISAVRKKADLTSLMFTEKDLRKAQIFTWLAWQKNPVVQMSKAIERNHAALNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCEEEC NCEPVELFINWLTRLFDLPDSA CCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GQINLILVEGSNDKFILIELIKRRLNSIINNPSQADHDKALIIKHNDTRLRIEQSGSKE CCEEEEEEECCCCCEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCCHH KAIHDLKFIFSGFNDSQQQTHDKISIIEELRVRLMQQDDENDDIVIGLILDADKDAQKTY HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHH AQVHTILAEKYPDVVPILPVEGLVLHAVDQPRIGVWIMPNNRDQGTIEDFFISLIRPDDA HHHHHHHHHHCCCEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHCCCCHH LWQEVQHTISAVRKKADLTSLMFTEKDLRKAQIFTWLAWQKNPVVQMSKAIERNHAALNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCEEEC NCEPVELFINWLTRLFDLPDSA CCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA