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The map label for this gene is araA

Identifier: 159900181

GI number: 159900181

Start: 4606508

End: 4608013

Strand: Direct

Name: araA

Synonym: Haur_3664

Alternate gene names: 159900181

Gene position: 4606508-4608013 (Clockwise)

Preceding gene: 159900180

Following gene: 159900182

Centisome position: 72.58

GC content: 51.46

Gene sequence:

>1506_bases
ATGCTTGACTTGAAACAATACGAAGTTTGGTTTATTACGGGCAGCCAACATTTGTATGGCCCCGAAACTTTAGAACAAGT
TGCCAAACACTCCCAAATTATCGCCGCTGGGCTTGATCAAAGTAGCACAATTCCGGTGCGGGTGGTGTTTAAGCCTGTGC
TTAAAACGCCCGACGAAATTTATAATTTGGTGCTCGAAGCCAACGCCGCCAAAAACTGCATTGGCTTGGTCGCGTGGATG
CATACCTTCTCGCCAGCCAAAATGTGGATTGCCGGCCTACGCAGCTTGCAAAAACCATTGGCTCACTTGCACACCCAATT
CAACAGCGAAATTCCATGGTCGGAAATCGACATGGATTTTATGAATCTCAACCAAGCCGCCCACGGCGACCGCGAATTTG
GCTTTATTGTCAGCCGCATGCGCTTGGAACGCAAAGTGATTGTGGGTCATTGGCAAGATAGCGAAGTGCATGATCGAATT
GCTGCCTGGACTCGCGCCGCCGCTGCTTGGCACGATGCTCAAGGCGCACGCTTCGCCCGCTTTGGCGACAACATGCGTGA
AGTTGCCGTAACCGAAGGCGATAAAGTTAATGCTCAAATGCGGCTTGGCTATAGCGTCAGCGGCTATGGCGTGGGCGATC
TAGTGCGCTTTGTCAACGAAGTTAGCGATGCCGATATCGACAGCACGTTGCAAGAATATGCCGAACAGTACGAATTGGCA
GCAGGTTTACAAGCTGGCGGCGAGCAGCATCACTCGCTACGTGAAGCCGCCCGCATCGAGCTAGGCTTGCGCTATTTCCT
TGAGCATGGCAATTTCAAAGGCTTTACAACGACGTTTGAAGATTTACATGGCTTAGTGCAATTGCCAGGTTTAGGCCCAC
AACGCCTGATGGATCGTGGCTATGGCTTTGCTGGCGAGGGCGATTGGAAAACCGCTGCGCTGGTGCGGGCAATGAAGGTG
ATGAGCGCTGGCCTCAACGGTGGCACTTCTTTCATGGAAGATTACACCTATCACTTTGGCAGCAACGGCATGAAAGTGCT
AGGCGCACATATGCTCGAAATCTGTCCATCAATTGCTGCGACTAAACCACGGCTCGAAGTGCATCCCTTGGGCATTGGTG
GCAAGGCTGATCCGGTGCGTATGGTATTTGATGCCAAAACTGGACCTGCCGTCAACGCCTCAATCGTGGAAATGGGCAAT
CGTTTGCGCTTGATCAATAGCGTGGTTGATGCAGTTGAAACCGACCAACCCTTGCCCAAATTACCAGTTGCCCGCGCCTT
GTGGCTACCCCAGCCCGATCTCAAAACCGCTGCGGCAGCTTGGATCTACGCAGGCGGAGCGCATCACACGGGCTTTAGTT
TTGATCTGACCAGCGAACATCTCGCCGACTTTGCTGAAATTGCTGGCATGGAATATTTGCAAATTGATCGCAACACCAAC
GTTCAGCAATTCAAACAAGAACTTCGTTGGAACGATCTGTACTATCACTTGGCCAAAGGTTTGTAA

Upstream 100 bases:

>100_bases
TGATCATTAGATCTCCCCTCTCCCGCCGCAGTGGGAGAGGGATTGGGGGTAAGGGAATGAACCGATCCCCAAACCCCAAC
TATTACAGAAAGGCCAGTCA

Downstream 100 bases:

>100_bases
ACCCACGGCAAGCAACCCAAGTCGCAACGCTGCACAACCTTGGCAACGATCGCCAACTGTGGTGGATTGGCGATCCTCTA
GCCTTGAGCAGCAGGGCAAC

Product: L-arabinose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MLDLKQYEVWFITGSQHLYGPETLEQVAKHSQIIAAGLDQSSTIPVRVVFKPVLKTPDEIYNLVLEANAAKNCIGLVAWM
HTFSPAKMWIAGLRSLQKPLAHLHTQFNSEIPWSEIDMDFMNLNQAAHGDREFGFIVSRMRLERKVIVGHWQDSEVHDRI
AAWTRAAAAWHDAQGARFARFGDNMREVAVTEGDKVNAQMRLGYSVSGYGVGDLVRFVNEVSDADIDSTLQEYAEQYELA
AGLQAGGEQHHSLREAARIELGLRYFLEHGNFKGFTTTFEDLHGLVQLPGLGPQRLMDRGYGFAGEGDWKTAALVRAMKV
MSAGLNGGTSFMEDYTYHFGSNGMKVLGAHMLEICPSIAATKPRLEVHPLGIGGKADPVRMVFDAKTGPAVNASIVEMGN
RLRLINSVVDAVETDQPLPKLPVARALWLPQPDLKTAAAAWIYAGGAHHTGFSFDLTSEHLADFAEIAGMEYLQIDRNTN
VQQFKQELRWNDLYYHLAKGL

Sequences:

>Translated_501_residues
MLDLKQYEVWFITGSQHLYGPETLEQVAKHSQIIAAGLDQSSTIPVRVVFKPVLKTPDEIYNLVLEANAAKNCIGLVAWM
HTFSPAKMWIAGLRSLQKPLAHLHTQFNSEIPWSEIDMDFMNLNQAAHGDREFGFIVSRMRLERKVIVGHWQDSEVHDRI
AAWTRAAAAWHDAQGARFARFGDNMREVAVTEGDKVNAQMRLGYSVSGYGVGDLVRFVNEVSDADIDSTLQEYAEQYELA
AGLQAGGEQHHSLREAARIELGLRYFLEHGNFKGFTTTFEDLHGLVQLPGLGPQRLMDRGYGFAGEGDWKTAALVRAMKV
MSAGLNGGTSFMEDYTYHFGSNGMKVLGAHMLEICPSIAATKPRLEVHPLGIGGKADPVRMVFDAKTGPAVNASIVEMGN
RLRLINSVVDAVETDQPLPKLPVARALWLPQPDLKTAAAAWIYAGGAHHTGFSFDLTSEHLADFAEIAGMEYLQIDRNTN
VQQFKQELRWNDLYYHLAKGL
>Mature_501_residues
MLDLKQYEVWFITGSQHLYGPETLEQVAKHSQIIAAGLDQSSTIPVRVVFKPVLKTPDEIYNLVLEANAAKNCIGLVAWM
HTFSPAKMWIAGLRSLQKPLAHLHTQFNSEIPWSEIDMDFMNLNQAAHGDREFGFIVSRMRLERKVIVGHWQDSEVHDRI
AAWTRAAAAWHDAQGARFARFGDNMREVAVTEGDKVNAQMRLGYSVSGYGVGDLVRFVNEVSDADIDSTLQEYAEQYELA
AGLQAGGEQHHSLREAARIELGLRYFLEHGNFKGFTTTFEDLHGLVQLPGLGPQRLMDRGYGFAGEGDWKTAALVRAMKV
MSAGLNGGTSFMEDYTYHFGSNGMKVLGAHMLEICPSIAATKPRLEVHPLGIGGKADPVRMVFDAKTGPAVNASIVEMGN
RLRLINSVVDAVETDQPLPKLPVARALWLPQPDLKTAAAAWIYAGGAHHTGFSFDLTSEHLADFAEIAGMEYLQIDRNTN
VQQFKQELRWNDLYYHLAKGL

Specific function: Catalyzes the conversion of L-arabinose to L-ribulose

COG id: COG2160

COG function: function code G; L-arabinose isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arabinose isomerase family

Homologues:

Organism=Escherichia coli, GI1786248, Length=496, Percent_Identity=57.258064516129, Blast_Score=607, Evalue=1e-175,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARAA_HERA2 (A9B689)

Other databases:

- EMBL:   CP000875
- RefSeq:   YP_001546428.1
- ProteinModelPortal:   A9B689
- SMR:   A9B689
- GeneID:   5735525
- GenomeReviews:   CP000875_GR
- KEGG:   hau:Haur_3664
- HOGENOM:   HBG297198
- OMA:   EVCPTIA
- ProtClustDB:   PRK02929
- BioCyc:   HAUR316274:HAUR_3664-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00519
- InterPro:   IPR004216
- InterPro:   IPR009015
- InterPro:   IPR003762
- PIRSF:   PIRSF001478
- ProDom:   PD018364

Pfam domain/function: PF02610 Arabinose_Isome; SSF50443 Fuc_isomerase_C; SSF53743 Fuc_isomerase_N

EC number: =5.3.1.4

Molecular weight: Translated: 55679; Mature: 55679

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLKQYEVWFITGSQHLYGPETLEQVAKHSQIIAAGLDQSSTIPVRVVFKPVLKTPDEI
CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCEEEEHHHHHCCHHHH
YNLVLEANAAKNCIGLVAWMHTFSPAKMWIAGLRSLQKPLAHLHTQFNSEIPWSEIDMDF
HHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHH
MNLNQAAHGDREFGFIVSRMRLERKVIVGHWQDSEVHDRIAAWTRAAAAWHDAQGARFAR
HHCCHHCCCCCHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
FGDNMREVAVTEGDKVNAQMRLGYSVSGYGVGDLVRFVNEVSDADIDSTLQEYAEQYELA
HCCCCCEEEECCCCCCCEEEEECEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AGLQAGGEQHHSLREAARIELGLRYFLEHGNFKGFTTTFEDLHGLVQLPGLGPQRLMDRG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEECCCCCHHHHHHCC
YGFAGEGDWKTAALVRAMKVMSAGLNGGTSFMEDYTYHFGSNGMKVLGAHMLEICPSIAA
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
TKPRLEVHPLGIGGKADPVRMVFDAKTGPAVNASIVEMGNRLRLINSVVDAVETDQPLPK
CCCCCEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCC
LPVARALWLPQPDLKTAAAAWIYAGGAHHTGFSFDLTSEHLADFAEIAGMEYLQIDRNTN
CCHHHHHCCCCCCHHHHHHHHHEECCCCCCCEEECCCHHHHHHHHHHCCCEEEEECCCCC
VQQFKQELRWNDLYYHLAKGL
HHHHHHHHCHHHHHHHHHHCC
>Mature Secondary Structure
MLDLKQYEVWFITGSQHLYGPETLEQVAKHSQIIAAGLDQSSTIPVRVVFKPVLKTPDEI
CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCEEEEHHHHHCCHHHH
YNLVLEANAAKNCIGLVAWMHTFSPAKMWIAGLRSLQKPLAHLHTQFNSEIPWSEIDMDF
HHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHH
MNLNQAAHGDREFGFIVSRMRLERKVIVGHWQDSEVHDRIAAWTRAAAAWHDAQGARFAR
HHCCHHCCCCCHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
FGDNMREVAVTEGDKVNAQMRLGYSVSGYGVGDLVRFVNEVSDADIDSTLQEYAEQYELA
HCCCCCEEEECCCCCCCEEEEECEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AGLQAGGEQHHSLREAARIELGLRYFLEHGNFKGFTTTFEDLHGLVQLPGLGPQRLMDRG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEECCCCCHHHHHHCC
YGFAGEGDWKTAALVRAMKVMSAGLNGGTSFMEDYTYHFGSNGMKVLGAHMLEICPSIAA
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
TKPRLEVHPLGIGGKADPVRMVFDAKTGPAVNASIVEMGNRLRLINSVVDAVETDQPLPK
CCCCCEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCC
LPVARALWLPQPDLKTAAAAWIYAGGAHHTGFSFDLTSEHLADFAEIAGMEYLQIDRNTN
CCHHHHHCCCCCCHHHHHHHHHEECCCCCCCEEECCCHHHHHHHHHHCCCEEEEECCCCC
VQQFKQELRWNDLYYHLAKGL
HHHHHHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA