| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900058
Identifier: 159900058
GI number: 159900058
Start: 4456122
End: 4457477
Strand: Reverse
Name: 159900058
Synonym: Haur_3541
Alternate gene names: NA
Gene position: 4457477-4456122 (Counterclockwise)
Preceding gene: 159900059
Following gene: 159900057
Centisome position: 70.23
GC content: 48.97
Gene sequence:
>1356_bases GTGGTTTTACGTCGGATTTTAGGCATCGTCACTGCGGCTATCGCTGTCGTGAGTTTAGCTGTTCAACCTCGTTCAACTGC GGCTGCAGAACCAATCAAACTTGATACCCAATGCTTTGATGTACCAGGGATTATCAACTGTTTAGATGATAAATTTCTGA GCTATTGGCGCAGCAATGGTGGTTTGCCAGTGTTTGGCTACCCAATTACTGCGGCTGCCAATGAAGTTAACCCCGATACC CAGCAAAGCTACTTGACACAGTGGCTCGAACGTAATCGGTTTGAATTACACCCCGAAAATGCAGGTACGCCTTACGAGGT GTTGTTGGGCTTGTTGGGCAAAGAACGCTTGACCCAACTTGGCCGTGAAATTGAGCCTCGCGAAGCTGGCCCAGTCGATG GCTGCTTATGGTTCGAACAAACTGGCCACAATGTCTGTGATCAAGCAGGTAGTTTGGGTTTCAAGAGCTATTGGCAATCG CATGGCTTGAAAATTGATGGCCTAGACAATTATGCTCGTTCATTGCAATTGTTTGGTTTGCCCTTGACCAGCGCTAAGAG TGAAACCAATGCCAACGGCGATACAGTTGTCACCCAATGGTTTGAACGTGCTCGCCTCGAATGGCACCCAAGCAATCCCG ATGAATTCAAGGTGCTCTTGGGCTTGCTCGGTAAAGAAATTATCGATGGCCGTAGCCAACCAACTCCACCAACGCCAATT GATCCTTGTGCTTCAACCCCTGATCCAGTGTCAGCTCGCGTGCGCCCAGCCAAATGTGGTGAGCAAGGCACCGAGTTTTC GTTTGATTTCTATGGTTTCAAGGCCAGCGAAGAGGTTGGCTTCTGGATTACCAATCCCGATGGGATCAATGTTGGGACAC GGCAAACAGCGAAGGTTGGCCCAAACGGGAGCATTAGTGGCCTCCCATTCGATAGCCGCGATGCCACACCTGGCACTTGG CAATTTACCATGCAATCAGCCTATCAAAGCCATCAGGCTATTGTCTATATTACAGTAATTGCCAAGGCTCCCCAGCCAAC CCCAAACCCAAGCAACTGTACTAGCACGCCTGAACCAGTTTCAGCGCGAATTAGCCCAGCAAAATGTGGTCCAGCAGGCA TGGTCTTTATCTTCGATGTATTTGGGTTCCAACCCAACGAACAAGTTGGCTTCTGGATCACTAATCCCGACGGAATTAAT GTTGGGATTGCCAATACTATGAATATTGGCCCCGAAGGTGCAATCTCAGGGATCGAGTTCCCAACTGATGGTTTTACTCC TGGCACATGGCAATTTACCATGCAAGGGACGACCAGCAATCACGCTTCAATCATCTACTTTACGATTACCGAATAA
Upstream 100 bases:
>100_bases CGATTCGGTTGTGAGAGAATTTGCCAATGGCATACAACTTGATGAAGAGTTTGCGTTGATAGGTTTTAGGCTGCCGAGAG CAGCATATTTGGAGGATATT
Downstream 100 bases:
>100_bases GCTTATCGATTGAACCAATCGATTGATTGCAGAAACCCAGCGTGTGGCAATACGCTGGGTTTTTGTTATCATAAGGCTAT TCCATTATTTTGATGCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MVLRRILGIVTAAIAVVSLAVQPRSTAAAEPIKLDTQCFDVPGIINCLDDKFLSYWRSNGGLPVFGYPITAAANEVNPDT QQSYLTQWLERNRFELHPENAGTPYEVLLGLLGKERLTQLGREIEPREAGPVDGCLWFEQTGHNVCDQAGSLGFKSYWQS HGLKIDGLDNYARSLQLFGLPLTSAKSETNANGDTVVTQWFERARLEWHPSNPDEFKVLLGLLGKEIIDGRSQPTPPTPI DPCASTPDPVSARVRPAKCGEQGTEFSFDFYGFKASEEVGFWITNPDGINVGTRQTAKVGPNGSISGLPFDSRDATPGTW QFTMQSAYQSHQAIVYITVIAKAPQPTPNPSNCTSTPEPVSARISPAKCGPAGMVFIFDVFGFQPNEQVGFWITNPDGIN VGIANTMNIGPEGAISGIEFPTDGFTPGTWQFTMQGTTSNHASIIYFTITE
Sequences:
>Translated_451_residues MVLRRILGIVTAAIAVVSLAVQPRSTAAAEPIKLDTQCFDVPGIINCLDDKFLSYWRSNGGLPVFGYPITAAANEVNPDT QQSYLTQWLERNRFELHPENAGTPYEVLLGLLGKERLTQLGREIEPREAGPVDGCLWFEQTGHNVCDQAGSLGFKSYWQS HGLKIDGLDNYARSLQLFGLPLTSAKSETNANGDTVVTQWFERARLEWHPSNPDEFKVLLGLLGKEIIDGRSQPTPPTPI DPCASTPDPVSARVRPAKCGEQGTEFSFDFYGFKASEEVGFWITNPDGINVGTRQTAKVGPNGSISGLPFDSRDATPGTW QFTMQSAYQSHQAIVYITVIAKAPQPTPNPSNCTSTPEPVSARISPAKCGPAGMVFIFDVFGFQPNEQVGFWITNPDGIN VGIANTMNIGPEGAISGIEFPTDGFTPGTWQFTMQGTTSNHASIIYFTITE >Mature_451_residues MVLRRILGIVTAAIAVVSLAVQPRSTAAAEPIKLDTQCFDVPGIINCLDDKFLSYWRSNGGLPVFGYPITAAANEVNPDT QQSYLTQWLERNRFELHPENAGTPYEVLLGLLGKERLTQLGREIEPREAGPVDGCLWFEQTGHNVCDQAGSLGFKSYWQS HGLKIDGLDNYARSLQLFGLPLTSAKSETNANGDTVVTQWFERARLEWHPSNPDEFKVLLGLLGKEIIDGRSQPTPPTPI DPCASTPDPVSARVRPAKCGEQGTEFSFDFYGFKASEEVGFWITNPDGINVGTRQTAKVGPNGSISGLPFDSRDATPGTW QFTMQSAYQSHQAIVYITVIAKAPQPTPNPSNCTSTPEPVSARISPAKCGPAGMVFIFDVFGFQPNEQVGFWITNPDGIN VGIANTMNIGPEGAISGIEFPTDGFTPGTWQFTMQGTTSNHASIIYFTITE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49085; Mature: 49085
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLRRILGIVTAAIAVVSLAVQPRSTAAAEPIKLDTQCFDVPGIINCLDDKFLSYWRSNG CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEECCCHHHHHHHHHHHHHHHCCC GLPVFGYPITAAANEVNPDTQQSYLTQWLERNRFELHPENAGTPYEVLLGLLGKERLTQL CCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCHHHHHHH GREIEPREAGPVDGCLWFEQTGHNVCDQAGSLGFKSYWQSHGLKIDGLDNYARSLQLFGL CCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHCCEEEECCHHHHHCEEEECC PLTSAKSETNANGDTVVTQWFERARLEWHPSNPDEFKVLLGLLGKEIIDGRSQPTPPTPI CCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC DPCASTPDPVSARVRPAKCGEQGTEFSFDFYGFKASEEVGFWITNPDGINVGTRQTAKVG CCCCCCCCCCCCCEECHHCCCCCCCEEEEEECEEECCCCEEEEECCCCCCCCCCCCEEEC PNGSISGLPFDSRDATPGTWQFTMQSAYQSHQAIVYITVIAKAPQPTPNPSNCTSTPEPV CCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC SARISPAKCGPAGMVFIFDVFGFQPNEQVGFWITNPDGINVGIANTMNIGPEGAISGIEF CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCC PTDGFTPGTWQFTMQGTTSNHASIIYFTITE CCCCCCCCEEEEEEECCCCCCCEEEEEEECC >Mature Secondary Structure MVLRRILGIVTAAIAVVSLAVQPRSTAAAEPIKLDTQCFDVPGIINCLDDKFLSYWRSNG CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEECCCHHHHHHHHHHHHHHHCCC GLPVFGYPITAAANEVNPDTQQSYLTQWLERNRFELHPENAGTPYEVLLGLLGKERLTQL CCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCHHHHHHH GREIEPREAGPVDGCLWFEQTGHNVCDQAGSLGFKSYWQSHGLKIDGLDNYARSLQLFGL CCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHCCEEEECCHHHHHCEEEECC PLTSAKSETNANGDTVVTQWFERARLEWHPSNPDEFKVLLGLLGKEIIDGRSQPTPPTPI CCCCCCCCCCCCCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC DPCASTPDPVSARVRPAKCGEQGTEFSFDFYGFKASEEVGFWITNPDGINVGTRQTAKVG CCCCCCCCCCCCCEECHHCCCCCCCEEEEEECEEECCCCEEEEECCCCCCCCCCCCEEEC PNGSISGLPFDSRDATPGTWQFTMQSAYQSHQAIVYITVIAKAPQPTPNPSNCTSTPEPV CCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC SARISPAKCGPAGMVFIFDVFGFQPNEQVGFWITNPDGINVGIANTMNIGPEGAISGIEF CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCC PTDGFTPGTWQFTMQGTTSNHASIIYFTITE CCCCCCCCEEEEEEECCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA