| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900057
Identifier: 159900057
GI number: 159900057
Start: 4454977
End: 4455981
Strand: Reverse
Name: 159900057
Synonym: Haur_3540
Alternate gene names: NA
Gene position: 4455981-4454977 (Counterclockwise)
Preceding gene: 159900058
Following gene: 159900056
Centisome position: 70.21
GC content: 49.95
Gene sequence:
>1005_bases ATGCTTGGTTTGGCGACTGCAACCCTGGCAGTGGCCGCCTTGGTTGTTCAGCCACGCCCAACCGCCGCCGCTGAGCCAAT TATCCTAGAAACCCAATGTTTTGATGTGCCTGGGATTGTTGACTGCTTGGACGACGATTTCTTGAGCTATTGGCGCAATA ACGGTGGCTTGCCAGTGTTCGGCTACCCGATCACTGAAGCTGCTGATCAATATAACGTTGATAGTGATGATTTTTATTGG ACGCAATGGCTCGAACGCAATCGTTTTGAGTTGCACCCCGAAAATGCTGGCACACCTTACGAGGTGTTGTTGGGCTTGTT GGGTAAAGAACGCTTGAGCCAACTTGGCCGCGAGATCGAGCCACGCGAAGCTGGCCCCGTTGAAGGCTGTTTGTGGTTTG AACAAACGGGCCATAATGTTTGTAACCAAGCAGGCAATTTAGGTTTCAAGAGTTATTGGCAATCACATGGTTTGAAAATT GAGGGCTTAGATACCTATGCCCGTTCATTGCAATTATTTGGTTTGCCCTTAACCAGTGCCCAAACTGAAACCAACGCCAG CGGCGATACCGTGATCACCCAATGGTTTGAACGTGCTCGCCTCGAATGGCATCCGAACAATCCCGATGAATTTAAGGTAC TTTTGGGCTTGCTTGGCAAAGAAATTCTCGATGATGTCAGCGAGCCATTGCCCCCAGCCGAACAATGTGCCCAAACTCCC GATCCAGTGTCGGCGAATATTCGGCCCACCAAATGTCCGCAAGTTGGCACGGTTGTCTTCTTCGATTTCTTTGGCTTCCA ACCAAATGAAGAAGTCGTTTTGTGGGTTGTCGATCCTGCTGGCGAAGTCTATGAATTTGATGAAGGAACCACGATTGGGC CAAGTGGCTCGGTTGAAAATGTCGAATGGCCAACCGCAGGCTCGCCAACTGGCTTGTGGCTGATTTCGCTCGAAGGTAAG ACCAGCGGACATGTTGCTGATATTTATTTCACCGTCATGCCCTAA
Upstream 100 bases:
>100_bases CGTGTGGCAATACGCTGGGTTTTTGTTATCATAAGGCTATTCCATTATTTTGATGCTGTTTGCAGCATGTTTGGAGGAAA TAGTGAGTGTGATCCGTCGA
Downstream 100 bases:
>100_bases GTTGATCGTTTGACCATGGCCCCACAGCTTCCTAAATGCTGTGGGGCTTTTTTGTGCTTGAGGGTAGTACCAAGGTAGTC TAGCGCTAGAGATATATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MLGLATATLAVAALVVQPRPTAAAEPIILETQCFDVPGIVDCLDDDFLSYWRNNGGLPVFGYPITEAADQYNVDSDDFYW TQWLERNRFELHPENAGTPYEVLLGLLGKERLSQLGREIEPREAGPVEGCLWFEQTGHNVCNQAGNLGFKSYWQSHGLKI EGLDTYARSLQLFGLPLTSAQTETNASGDTVITQWFERARLEWHPNNPDEFKVLLGLLGKEILDDVSEPLPPAEQCAQTP DPVSANIRPTKCPQVGTVVFFDFFGFQPNEEVVLWVVDPAGEVYEFDEGTTIGPSGSVENVEWPTAGSPTGLWLISLEGK TSGHVADIYFTVMP
Sequences:
>Translated_334_residues MLGLATATLAVAALVVQPRPTAAAEPIILETQCFDVPGIVDCLDDDFLSYWRNNGGLPVFGYPITEAADQYNVDSDDFYW TQWLERNRFELHPENAGTPYEVLLGLLGKERLSQLGREIEPREAGPVEGCLWFEQTGHNVCNQAGNLGFKSYWQSHGLKI EGLDTYARSLQLFGLPLTSAQTETNASGDTVITQWFERARLEWHPNNPDEFKVLLGLLGKEILDDVSEPLPPAEQCAQTP DPVSANIRPTKCPQVGTVVFFDFFGFQPNEEVVLWVVDPAGEVYEFDEGTTIGPSGSVENVEWPTAGSPTGLWLISLEGK TSGHVADIYFTVMP >Mature_334_residues MLGLATATLAVAALVVQPRPTAAAEPIILETQCFDVPGIVDCLDDDFLSYWRNNGGLPVFGYPITEAADQYNVDSDDFYW TQWLERNRFELHPENAGTPYEVLLGLLGKERLSQLGREIEPREAGPVEGCLWFEQTGHNVCNQAGNLGFKSYWQSHGLKI EGLDTYARSLQLFGLPLTSAQTETNASGDTVITQWFERARLEWHPNNPDEFKVLLGLLGKEILDDVSEPLPPAEQCAQTP DPVSANIRPTKCPQVGTVVFFDFFGFQPNEEVVLWVVDPAGEVYEFDEGTTIGPSGSVENVEWPTAGSPTGLWLISLEGK TSGHVADIYFTVMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36883; Mature: 36883
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGLATATLAVAALVVQPRPTAAAEPIILETQCFDVPGIVDCLDDDFLSYWRNNGGLPVF CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE GYPITEAADQYNVDSDDFYWTQWLERNRFELHPENAGTPYEVLLGLLGKERLSQLGREIE CCCHHHHHHHCCCCCCCHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCHHHHHHHCCCCC PREAGPVEGCLWFEQTGHNVCNQAGNLGFKSYWQSHGLKIEGLDTYARSLQLFGLPLTSA CCCCCCCCEEEEEHHHCCHHHHHHCCCCHHHHHHHCCCEEECHHHHHHHHHHCCCCCCCC QTETNASGDTVITQWFERARLEWHPNNPDEFKVLLGLLGKEILDDVSEPLPPAEQCAQTP CCCCCCCCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC DPVSANIRPTKCPQVGTVVFFDFFGFQPNEEVVLWVVDPAGEVYEFDEGTTIGPSGSVEN CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEECCCCCEECCCCCCCC VEWPTAGSPTGLWLISLEGKTSGHVADIYFTVMP CCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECC >Mature Secondary Structure MLGLATATLAVAALVVQPRPTAAAEPIILETQCFDVPGIVDCLDDDFLSYWRNNGGLPVF CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE GYPITEAADQYNVDSDDFYWTQWLERNRFELHPENAGTPYEVLLGLLGKERLSQLGREIE CCCHHHHHHHCCCCCCCHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCHHHHHHHCCCCC PREAGPVEGCLWFEQTGHNVCNQAGNLGFKSYWQSHGLKIEGLDTYARSLQLFGLPLTSA CCCCCCCCEEEEEHHHCCHHHHHHCCCCHHHHHHHCCCEEECHHHHHHHHHHCCCCCCCC QTETNASGDTVITQWFERARLEWHPNNPDEFKVLLGLLGKEILDDVSEPLPPAEQCAQTP CCCCCCCCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC DPVSANIRPTKCPQVGTVVFFDFFGFQPNEEVVLWVVDPAGEVYEFDEGTTIGPSGSVEN CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEECCCCCEECCCCCCCC VEWPTAGSPTGLWLISLEGKTSGHVADIYFTVMP CCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA