| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900059
Identifier: 159900059
GI number: 159900059
Start: 4457652
End: 4459568
Strand: Reverse
Name: 159900059
Synonym: Haur_3542
Alternate gene names: NA
Gene position: 4459568-4457652 (Counterclockwise)
Preceding gene: 159900070
Following gene: 159900058
Centisome position: 70.27
GC content: 50.39
Gene sequence:
>1917_bases ATGCAACGAACCGTTCGCATGGGCTTGCTACTGTTGTTGGCTTTTGGATTAATGCCCTTGATTCAACGCCCAGCGCAGGC AGCGACCCTCGATGATCAGATTATTGCCGATGAAATTCTGGTAACGTTTAATGATGGCTATCGTGTCAGTGCGAATGGGG CATTCTTTGAAGGTTCTAAGGCATTGAAAAATGGCCTAGGCATTGGGCCATTACTTTCGACCCAAATGCTTGATGGGGCT GGTCAAGTGGCAATGTTGAAGCTCCCCGCAGGCGCAAATGGCGATGCTAAAATTGCCCAATTGCTCAAAAATCCAGCAGT GCGCTACGCCGAATACAACGCTGTGCGTGAGATTCTGGTCGATCCCAATGATGAATATTACTCAGAACAATGGGGCTTGC CCAAAATTGGCGCTAATGCGGCTTGGGACATGACCCAAGGCAACGGCTTGGTGATTGCCATTATTGATACTGGGGTTTCA CCAACCCACCCTGATTTGGCTGGCCATGTGTTGCCTGGCTACAATGCCTTGCAAAATAATAGCAATAGCCAAGATGATCA AGGCCACGGTACGGCCATGGCTGGGATTGCTGCTGCCCTAACCAATAATGGTCAAGGTGTAGCTGGGGTTTGTTGGAACT GCCAAATCCTGCCAGTTAAAGTGCTGAACAGTCGTGGTCAAGGCACAGCGGCAGATATTGTCGAAGGCATGTATTGGGCT GCTGATAATGGCGCACGCATCATTAGTATGAGTTTGGGTGGCCCACGGGGTACGCAAGCCGAGCAAGATGCAGTTAATTA TATTTATAGCAAAAATATTCCACTCTTTGCCTCATCTGGCAATTCGGGCGATGAGGGCAACCCACGCATGTATCCAGCCG CTTTTGATCATGTAATTGCGGTTGGGGCAACCACGACCCAAGATCGGGTTGCAAGTTTCTCATCGTATGGCGATTATGTG GATATTGCTGCTCCAGGCGTAAATATTGTGACGACTGGATGGGATGGTGGCGATACCTATGAAATGGGCAGTGGCACATC GCCAGCTTGTCCGTTTGTGGCAGCAACTGCGGCCTTGGCGCTGAGTGTTTGGCCTGAGCTTACGGTCGATCAAATTGAAA AATTGATCACTGGCAGTGCTGTTGATATTTTGACTCCTGGTAAAGATGTCTATAGTGGGTTTGGCCGACTGGATACCTAC AAAACGGTGCAAAATGCGGTTTTGCGCACGATTCCTGGCGAACCACAACCCCAACCACCAGCACCACCAGCGCCGCAACC ACCAACTCCAGAACCACAACCAGGTAACCCTGCGTTTGTGCCTGTGGGAGCGCCCCCATTGCCAGCACCGGTCGGCGAAG TCTACTTCCCTGAAACTGGCCATAACTTGCGTGGCGAGTTCAAAAACTACTGGGATCGTAATGGTGGCTTGGCAGTCTTT GGCTTCCCAATTAGCGAAGAATTTACCGAACAAACTCCTGAAGGTTCGTTTACGGTGCAATACTTCGAACGCCAACGCTT TGAATTTCACCCTGAAAAAGCTGCACCCTACAACGTGTTGCTGGGTCGCTTAGGCGATGCTGTGCTGCGGGATCGTGGCG ACGATTGGGCCAACTTCCCCAAAACTGGGCCAGAAAATGGCTGTCTCTATTTCGATCAAACCCAGCACAAAATTTGTGGC GAGTTCCGCAAATATTGGGAAACCAATGGGCTGAATGATCCTGCTTTGAACAAATATGATCGCAGCTTGCAATTGTTTGG CTTGCCATTATCCGAGCCAATGACCGAAACCAATCGGGATGGGGCAACCGTCACGACCCAATGGTTTGAGCGCGGCCGCT TTGAGTATCACGAAGGTCAAGGCGTGCTGTTAGGTTTGTTGGCCAAAGAATATGCCAACAATCGCAGTTGGCGCTAA
Upstream 100 bases:
>100_bases TTTGGCATATTGTCGATTTGGCGTGGCTGCTGGTATAATGCAAGCTTGTAGAGGAGAGCTACCTCTCCCCATATATTTAA CTGAATGAGTGAGGCAACGT
Downstream 100 bases:
>100_bases TCGCGTTTAGAATGGCTGAAGCCAGCTTGTCTCTTGGGCTGGCTTCAGTATCACATAAATAGGGAAACGCCGCTCGATTC GGTTGTGAGAGAATTTGCCA
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 638; Mature: 638
Protein sequence:
>638_residues MQRTVRMGLLLLLAFGLMPLIQRPAQAATLDDQIIADEILVTFNDGYRVSANGAFFEGSKALKNGLGIGPLLSTQMLDGA GQVAMLKLPAGANGDAKIAQLLKNPAVRYAEYNAVREILVDPNDEYYSEQWGLPKIGANAAWDMTQGNGLVIAIIDTGVS PTHPDLAGHVLPGYNALQNNSNSQDDQGHGTAMAGIAAALTNNGQGVAGVCWNCQILPVKVLNSRGQGTAADIVEGMYWA ADNGARIISMSLGGPRGTQAEQDAVNYIYSKNIPLFASSGNSGDEGNPRMYPAAFDHVIAVGATTTQDRVASFSSYGDYV DIAAPGVNIVTTGWDGGDTYEMGSGTSPACPFVAATAALALSVWPELTVDQIEKLITGSAVDILTPGKDVYSGFGRLDTY KTVQNAVLRTIPGEPQPQPPAPPAPQPPTPEPQPGNPAFVPVGAPPLPAPVGEVYFPETGHNLRGEFKNYWDRNGGLAVF GFPISEEFTEQTPEGSFTVQYFERQRFEFHPEKAAPYNVLLGRLGDAVLRDRGDDWANFPKTGPENGCLYFDQTQHKICG EFRKYWETNGLNDPALNKYDRSLQLFGLPLSEPMTETNRDGATVTTQWFERGRFEYHEGQGVLLGLLAKEYANNRSWR
Sequences:
>Translated_638_residues MQRTVRMGLLLLLAFGLMPLIQRPAQAATLDDQIIADEILVTFNDGYRVSANGAFFEGSKALKNGLGIGPLLSTQMLDGA GQVAMLKLPAGANGDAKIAQLLKNPAVRYAEYNAVREILVDPNDEYYSEQWGLPKIGANAAWDMTQGNGLVIAIIDTGVS PTHPDLAGHVLPGYNALQNNSNSQDDQGHGTAMAGIAAALTNNGQGVAGVCWNCQILPVKVLNSRGQGTAADIVEGMYWA ADNGARIISMSLGGPRGTQAEQDAVNYIYSKNIPLFASSGNSGDEGNPRMYPAAFDHVIAVGATTTQDRVASFSSYGDYV DIAAPGVNIVTTGWDGGDTYEMGSGTSPACPFVAATAALALSVWPELTVDQIEKLITGSAVDILTPGKDVYSGFGRLDTY KTVQNAVLRTIPGEPQPQPPAPPAPQPPTPEPQPGNPAFVPVGAPPLPAPVGEVYFPETGHNLRGEFKNYWDRNGGLAVF GFPISEEFTEQTPEGSFTVQYFERQRFEFHPEKAAPYNVLLGRLGDAVLRDRGDDWANFPKTGPENGCLYFDQTQHKICG EFRKYWETNGLNDPALNKYDRSLQLFGLPLSEPMTETNRDGATVTTQWFERGRFEYHEGQGVLLGLLAKEYANNRSWR >Mature_638_residues MQRTVRMGLLLLLAFGLMPLIQRPAQAATLDDQIIADEILVTFNDGYRVSANGAFFEGSKALKNGLGIGPLLSTQMLDGA GQVAMLKLPAGANGDAKIAQLLKNPAVRYAEYNAVREILVDPNDEYYSEQWGLPKIGANAAWDMTQGNGLVIAIIDTGVS PTHPDLAGHVLPGYNALQNNSNSQDDQGHGTAMAGIAAALTNNGQGVAGVCWNCQILPVKVLNSRGQGTAADIVEGMYWA ADNGARIISMSLGGPRGTQAEQDAVNYIYSKNIPLFASSGNSGDEGNPRMYPAAFDHVIAVGATTTQDRVASFSSYGDYV DIAAPGVNIVTTGWDGGDTYEMGSGTSPACPFVAATAALALSVWPELTVDQIEKLITGSAVDILTPGKDVYSGFGRLDTY KTVQNAVLRTIPGEPQPQPPAPPAPQPPTPEPQPGNPAFVPVGAPPLPAPVGEVYFPETGHNLRGEFKNYWDRNGGLAVF GFPISEEFTEQTPEGSFTVQYFERQRFEFHPEKAAPYNVLLGRLGDAVLRDRGDDWANFPKTGPENGCLYFDQTQHKICG EFRKYWETNGLNDPALNKYDRSLQLFGLPLSEPMTETNRDGATVTTQWFERGRFEYHEGQGVLLGLLAKEYANNRSWR
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI76443679, Length=375, Percent_Identity=28.2666666666667, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI31317307, Length=257, Percent_Identity=26.8482490272374, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI4505579, Length=330, Percent_Identity=25.7575757575758, Blast_Score=72, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71983555, Length=319, Percent_Identity=23.8244514106583, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320775, Length=342, Percent_Identity=31.8713450292398, Blast_Score=115, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6324576, Length=342, Percent_Identity=29.2397660818713, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6319893, Length=275, Percent_Identity=29.0909090909091, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI45550681, Length=254, Percent_Identity=25.1968503937008, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 68769; Mature: 68769
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00136 SUBTILASE_ASP ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRTVRMGLLLLLAFGLMPLIQRPAQAATLDDQIIADEILVTFNDGYRVSANGAFFEGSK CCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHEECEEEEEECCCEEEECCCCEECCCH ALKNGLGIGPLLSTQMLDGAGQVAMLKLPAGANGDAKIAQLLKNPAVRYAEYNAVREILV HHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHC DPNDEYYSEQWGLPKIGANAAWDMTQGNGLVIAIIDTGVSPTHPDLAGHVLPGYNALQNN CCCHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCC SNSQDDQGHGTAMAGIAAALTNNGQGVAGVCWNCQILPVKVLNSRGQGTAADIVEGMYWA CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCEEEEEHEECCCCCCHHHHHHCCEEEE ADNGARIISMSLGGPRGTQAEQDAVNYIYSKNIPLFASSGNSGDEGNPRMYPAAFDHVIA ECCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCEECHHHHCCEEE VGATTTQDRVASFSSYGDYVDIAAPGVNIVTTGWDGGDTYEMGSGTSPACPFVAATAALA ECCCCCHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCEECCCCCCCCCHHHHHHHHHH LSVWPELTVDQIEKLITGSAVDILTPGKDVYSGFGRLDTYKTVQNAVLRTIPGEPQPQPP HHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC APPAPQPPTPEPQPGNPAFVPVGAPPLPAPVGEVYFPETGHNLRGEFKNYWDRNGGLAVF CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCHHHHHHCCCCCEEEE GFPISEEFTEQTPEGSFTVQYFERQRFEFHPEKAAPYNVLLGRLGDAVLRDRGDDWANFP ECCCCHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC KTGPENGCLYFDQTQHKICGEFRKYWETNGLNDPALNKYDRSLQLFGLPLSEPMTETNRD CCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCC GATVTTQWFERGRFEYHEGQGVLLGLLAKEYANNRSWR CCEEEHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQRTVRMGLLLLLAFGLMPLIQRPAQAATLDDQIIADEILVTFNDGYRVSANGAFFEGSK CCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHEECEEEEEECCCEEEECCCCEECCCH ALKNGLGIGPLLSTQMLDGAGQVAMLKLPAGANGDAKIAQLLKNPAVRYAEYNAVREILV HHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHC DPNDEYYSEQWGLPKIGANAAWDMTQGNGLVIAIIDTGVSPTHPDLAGHVLPGYNALQNN CCCHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCC SNSQDDQGHGTAMAGIAAALTNNGQGVAGVCWNCQILPVKVLNSRGQGTAADIVEGMYWA CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCEEEEEHEECCCCCCHHHHHHCCEEEE ADNGARIISMSLGGPRGTQAEQDAVNYIYSKNIPLFASSGNSGDEGNPRMYPAAFDHVIA ECCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCEECHHHHCCEEE VGATTTQDRVASFSSYGDYVDIAAPGVNIVTTGWDGGDTYEMGSGTSPACPFVAATAALA ECCCCCHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCEECCCCCCCCCHHHHHHHHHH LSVWPELTVDQIEKLITGSAVDILTPGKDVYSGFGRLDTYKTVQNAVLRTIPGEPQPQPP HHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC APPAPQPPTPEPQPGNPAFVPVGAPPLPAPVGEVYFPETGHNLRGEFKNYWDRNGGLAVF CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCHHHHHHCCCCCEEEE GFPISEEFTEQTPEGSFTVQYFERQRFEFHPEKAAPYNVLLGRLGDAVLRDRGDDWANFP ECCCCHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC KTGPENGCLYFDQTQHKICGEFRKYWETNGLNDPALNKYDRSLQLFGLPLSEPMTETNRD CCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCC GATVTTQWFERGRFEYHEGQGVLLGLLAKEYANNRSWR CCEEEHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]