| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900012
Identifier: 159900012
GI number: 159900012
Start: 4401828
End: 4402769
Strand: Reverse
Name: 159900012
Synonym: Haur_3495
Alternate gene names: NA
Gene position: 4402769-4401828 (Counterclockwise)
Preceding gene: 159900013
Following gene: 159900011
Centisome position: 69.37
GC content: 51.91
Gene sequence:
>942_bases ATGCGCTTACTACTTGGAATCTTATTGCTAAACTTAGTGTGGTGTAGCTACCGCCCCCAAGAACGCCAAATTCTCTGGGG GTGGTTTTTGCGTATCTGGCCACGGGTTCGACCAATATTGGGCTGGTTTTTGATTTTTATCGGCATCTTGGGTGTGATTC TGCCAATTCTCCAAGGGATTATCTTCTTGGTGATTGGCTCGGCCTTGATTGGCCCACGCCATCGGCTGATTCGCCGAACG CGAGTAGCTTATAAACAGGTTTTGCATCGTTTGGCTGGTTCGTCCAATCGATTTTTGGCATGGCTGGGGCGCTTTGGTAT CAGCTCGTTGCGCACCATGAACCAGCAAATTCGGCGTTTTATGGAATATCGCACGCGCTATCAGCGCAAGCATCGGCCAA TTCGCTTGGCAATTGTGCCGCCGCCCGATGTAGTGGCAATGCTTGATCACTATCGCCAGCGCTACGATCCGAGTTATCGC CATGGCTTGCCGCCGCATATCGTGCTTGTGCCAAGCAGCCATCCCAGCGATCGTGATGATTTTGAGCGAGCGGTGGCAAC CACCTTGAGCCAATGGTCGAGTTTTGATCTGACCCTTGAGCACTTGCAAATTGCCCCAAATCAGCATCGTTTGGTGCTGC TCCCTAGCCAAGGCAAAAACTTGCTCGAACAACTCCAAGCGAGCTTGCCGCAAACGCGCCCAATCAAACGCCAGCCATGG CCAGCCTTAACGATTGGCAAATTGCTGCAATATAGCAGTTTGGCGAGCGCTCAAACCTGGGTCGCCGAAACCTGGCAACC ACAACGCTGGCATGTAGCTGAATTGGTCTTGTTTGAAGAACGTTTTGGCCGGATGTGGCACGAAGTACGGCGTTTTCGTT TGGGCGCTCGCACGAACCATGCGGAGTGTGTTAAGATACATGCACTTAACGATTATGCCTAA
Upstream 100 bases:
>100_bases CCAATTACTTGGAATGTGGGTGCTTGGCAACGCTAGCGGCGCAGATTTTGCTTAATCGCGCTGATGACTACTGACGATCA ACGTGGATCAAACTGAAATT
Downstream 100 bases:
>100_bases AGCAGCGTTGCTTTACACTCACTGCCGAGGAGTTTTACGATGATTGAAACCACAATGGCAACCGCCCAGCGCCAATTTGA TATTGCCGCTGAATTGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MRLLLGILLLNLVWCSYRPQERQILWGWFLRIWPRVRPILGWFLIFIGILGVILPILQGIIFLVIGSALIGPRHRLIRRT RVAYKQVLHRLAGSSNRFLAWLGRFGISSLRTMNQQIRRFMEYRTRYQRKHRPIRLAIVPPPDVVAMLDHYRQRYDPSYR HGLPPHIVLVPSSHPSDRDDFERAVATTLSQWSSFDLTLEHLQIAPNQHRLVLLPSQGKNLLEQLQASLPQTRPIKRQPW PALTIGKLLQYSSLASAQTWVAETWQPQRWHVAELVLFEERFGRMWHEVRRFRLGARTNHAECVKIHALNDYA
Sequences:
>Translated_313_residues MRLLLGILLLNLVWCSYRPQERQILWGWFLRIWPRVRPILGWFLIFIGILGVILPILQGIIFLVIGSALIGPRHRLIRRT RVAYKQVLHRLAGSSNRFLAWLGRFGISSLRTMNQQIRRFMEYRTRYQRKHRPIRLAIVPPPDVVAMLDHYRQRYDPSYR HGLPPHIVLVPSSHPSDRDDFERAVATTLSQWSSFDLTLEHLQIAPNQHRLVLLPSQGKNLLEQLQASLPQTRPIKRQPW PALTIGKLLQYSSLASAQTWVAETWQPQRWHVAELVLFEERFGRMWHEVRRFRLGARTNHAECVKIHALNDYA >Mature_313_residues MRLLLGILLLNLVWCSYRPQERQILWGWFLRIWPRVRPILGWFLIFIGILGVILPILQGIIFLVIGSALIGPRHRLIRRT RVAYKQVLHRLAGSSNRFLAWLGRFGISSLRTMNQQIRRFMEYRTRYQRKHRPIRLAIVPPPDVVAMLDHYRQRYDPSYR HGLPPHIVLVPSSHPSDRDDFERAVATTLSQWSSFDLTLEHLQIAPNQHRLVLLPSQGKNLLEQLQASLPQTRPIKRQPW PALTIGKLLQYSSLASAQTWVAETWQPQRWHVAELVLFEERFGRMWHEVRRFRLGARTNHAECVKIHALNDYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36845; Mature: 36845
Theoretical pI: Translated: 11.84; Mature: 11.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLLGILLLNLVWCSYRPQERQILWGWFLRIWPRVRPILGWFLIFIGILGVILPILQGI CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFLVIGSALIGPRHRLIRRTRVAYKQVLHRLAGSSNRFLAWLGRFGISSLRTMNQQIRRF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MEYRTRYQRKHRPIRLAIVPPPDVVAMLDHYRQRYDPSYRHGLPPHIVLVPSSHPSDRDD HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHH FERAVATTLSQWSSFDLTLEHLQIAPNQHRLVLLPSQGKNLLEQLQASLPQTRPIKRQPW HHHHHHHHHHHHCCCCEEHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC PALTIGKLLQYSSLASAQTWVAETWQPQRWHVAELVLFEERFGRMWHEVRRFRLGARTNH CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AECVKIHALNDYA CCEEEEEECCCCC >Mature Secondary Structure MRLLLGILLLNLVWCSYRPQERQILWGWFLRIWPRVRPILGWFLIFIGILGVILPILQGI CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFLVIGSALIGPRHRLIRRTRVAYKQVLHRLAGSSNRFLAWLGRFGISSLRTMNQQIRRF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MEYRTRYQRKHRPIRLAIVPPPDVVAMLDHYRQRYDPSYRHGLPPHIVLVPSSHPSDRDD HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHH FERAVATTLSQWSSFDLTLEHLQIAPNQHRLVLLPSQGKNLLEQLQASLPQTRPIKRQPW HHHHHHHHHHHHCCCCEEHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC PALTIGKLLQYSSLASAQTWVAETWQPQRWHVAELVLFEERFGRMWHEVRRFRLGARTNH CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AECVKIHALNDYA CCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA