| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yegU [C]
Identifier: 159899930
GI number: 159899930
Start: 4299216
End: 4300136
Strand: Reverse
Name: yegU [C]
Synonym: Haur_3413
Alternate gene names: 159899930
Gene position: 4300136-4299216 (Counterclockwise)
Preceding gene: 159899931
Following gene: 159899929
Centisome position: 67.76
GC content: 56.24
Gene sequence:
>921_bases ATGACAGCAGCACAACAGCGCATGTTGGCGGCCTTAACAGGCTTATCGGTGGGCGAAGCCTATGGTCAACAGCTTTGGCA GCAAGTTCAAACTGGGCTTGCAGTTGCCGACCAGCCCAGCCTTTTGCCAGCACCATGGCTGTGGACAGACGCAACCTTGA TGGCATGTTCGTTGGTTGATCAATTATGGCATTATGGCGCGGTGCATAGTGCGGCGTTGGCTGCCGATTTGGCCTTGCGC TACACCCCAGTTCGTGATTATGGTACGTCGATGCATCAATTGTTGGCCAAGCCGCGTGATGGCGCAGCCGTCATGAGCGA TGCTCAAAACTTATTTGATGGACAAGGCTCGTTTGGAGTTGGCGCGGCCATGCGGGTGGCTCCCTTGGGCTTATTTTTGG CTGATGCTCCGCTGAACGAGGTTGCTCAACAAGCGCAACTTTCGGCGCTTACCACCCATACCCATCCTGAGGCGGTGGCG GGAGCGGTGGCAGTGGCAGTGGCAGGCGCAATTCTCTGGCGCGAACGTGATCAACCGCTGCGCCAGCCCTCGGCAATCTT GGCCGAGATTGGGCAATATGTGCCAAGTAGCAGCCTTGAGCATCGTTTGGCCTTAGCGGCGGCAATGAATGATCGCCAAA TGTGGCATCACATTGCTTTACGCTTAAGTAATGGCTATCAGCATAGCGCCCAAGCTACCGTTCCATGGTGCTTGTGGTGT GCTGTGCATTATCGCGATGATTATGCTGCGGCGATCGAGCAGGTGTGTGCAGCTGGCGGCAACTTTACCTCGATGGCCGC GATTGTTGGTGGCTTGTTGGCGGGCACGCTAGGCCGCGATTGTATTCCACCGCCATGGCTGCATGCCCGCGAACCTTTGC CAAGCTGGTTTTTGGCCAGCCTTGGCCTCGAAACTATTTGA
Upstream 100 bases:
>100_bases ATTTAGCGACCATTCAACAACAATGCCAACAAATTCATACCAACGTCTATCAGACCTTTATTAGTTATCCGGTGGAGACA GCATTGGTATAAGGATGATC
Downstream 100 bases:
>100_bases TTTCACGCTTGAAGTTTGGCAGGTGCTATGTACTACACCATTCGCCACGTTACCCGCTTTCGTTATAGCAACCCGATTAG CGAAAGCATGATGGAAGTTC
Product: ADP-ribosylation/crystallin J1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTAAQQRMLAALTGLSVGEAYGQQLWQQVQTGLAVADQPSLLPAPWLWTDATLMACSLVDQLWHYGAVHSAALAADLALR YTPVRDYGTSMHQLLAKPRDGAAVMSDAQNLFDGQGSFGVGAAMRVAPLGLFLADAPLNEVAQQAQLSALTTHTHPEAVA GAVAVAVAGAILWRERDQPLRQPSAILAEIGQYVPSSSLEHRLALAAAMNDRQMWHHIALRLSNGYQHSAQATVPWCLWC AVHYRDDYAAAIEQVCAAGGNFTSMAAIVGGLLAGTLGRDCIPPPWLHAREPLPSWFLASLGLETI
Sequences:
>Translated_306_residues MTAAQQRMLAALTGLSVGEAYGQQLWQQVQTGLAVADQPSLLPAPWLWTDATLMACSLVDQLWHYGAVHSAALAADLALR YTPVRDYGTSMHQLLAKPRDGAAVMSDAQNLFDGQGSFGVGAAMRVAPLGLFLADAPLNEVAQQAQLSALTTHTHPEAVA GAVAVAVAGAILWRERDQPLRQPSAILAEIGQYVPSSSLEHRLALAAAMNDRQMWHHIALRLSNGYQHSAQATVPWCLWC AVHYRDDYAAAIEQVCAAGGNFTSMAAIVGGLLAGTLGRDCIPPPWLHAREPLPSWFLASLGLETI >Mature_305_residues TAAQQRMLAALTGLSVGEAYGQQLWQQVQTGLAVADQPSLLPAPWLWTDATLMACSLVDQLWHYGAVHSAALAADLALRY TPVRDYGTSMHQLLAKPRDGAAVMSDAQNLFDGQGSFGVGAAMRVAPLGLFLADAPLNEVAQQAQLSALTTHTHPEAVAG AVAVAVAGAILWRERDQPLRQPSAILAEIGQYVPSSSLEHRLALAAAMNDRQMWHHIALRLSNGYQHSAQATVPWCLWCA VHYRDDYAAAIEQVCAAGGNFTSMAAIVGGLLAGTLGRDCIPPPWLHAREPLPSWFLASLGLETI
Specific function: Unknown
COG id: COG1397
COG function: function code O; ADP-ribosylglycohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32688; Mature: 32556
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAQQRMLAALTGLSVGEAYGQQLWQQVQTGLAVADQPSLLPAPWLWTDATLMACSLVD CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHHH QLWHYGAVHSAALAADLALRYTPVRDYGTSMHQLLAKPRDGAAVMSDAQNLFDGQGSFGV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCH GAAMRVAPLGLFLADAPLNEVAQQAQLSALTTHTHPEAVAGAVAVAVAGAILWRERDQPL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC RQPSAILAEIGQYVPSSSLEHRLALAAAMNDRQMWHHIALRLSNGYQHSAQATVPWCLWC CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH AVHYRDDYAAAIEQVCAAGGNFTSMAAIVGGLLAGTLGRDCIPPPWLHAREPLPSWFLAS HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH LGLETI CCCCCC >Mature Secondary Structure TAAQQRMLAALTGLSVGEAYGQQLWQQVQTGLAVADQPSLLPAPWLWTDATLMACSLVD CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHHH QLWHYGAVHSAALAADLALRYTPVRDYGTSMHQLLAKPRDGAAVMSDAQNLFDGQGSFGV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCH GAAMRVAPLGLFLADAPLNEVAQQAQLSALTTHTHPEAVAGAVAVAVAGAILWRERDQPL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC RQPSAILAEIGQYVPSSSLEHRLALAAAMNDRQMWHHIALRLSNGYQHSAQATVPWCLWC CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH AVHYRDDYAAAIEQVCAAGGNFTSMAAIVGGLLAGTLGRDCIPPPWLHAREPLPSWFLAS HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH LGLETI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA