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The map label for this gene is cyc1 [H]

Identifier: 159899507

GI number: 159899507

Start: 3773506

End: 3774495

Strand: Reverse

Name: cyc1 [H]

Synonym: Haur_2988

Alternate gene names: 159899507

Gene position: 3774495-3773506 (Counterclockwise)

Preceding gene: 159899508

Following gene: 159899506

Centisome position: 59.47

GC content: 42.93

Gene sequence:

>990_bases
ATGCCAAATACAGCACACCTACAACAATTAGCGAGAACGGTTCCAGCAACCATTCCCAAGTTGGAATCACCGTTTCCTGC
GCAAATCCATCCATTGGCAGCGGAGGTTCAACAGCAGACGACCAAATGGGTGCTTGAACAAGGTTTATTGAGCGAAGCGC
GGCGTAAAGCTTTTCTTGATTACAACTATACCTTGTTGATTGCCCGTTGTTATCCGTATGCGAGTGTTGAGCGGCTGCAA
ATTATCAGCGATTGGAATGCTTGGCTGTTTGAACTTGATGATCAATGTGACGAAGCGCGAATTGGCCATGACCCTCAAGC
GTTGGCTCGCTTGCATCAGCGGCTTGGGGCAGTTATTCGCGGAGCCACGGTTGCTGCCGACGAACCACTATTAGTTACAG
CCCTCGCTGATATTATGGGTCGGATGCGGGCGCTAGCACCACTGGCATGGTTTGAGGTTTTTACCCAACAGGTTGACGAT
TATTTTATTGGCAATCAATGGGAAGCCCACAATCGGCTGTACTCGATTATTCCCAGCGAAATTGAATACTTGCACTATCG
TAAATTTACTAGTGCTGTTGCGATCTATATTGCGTTTATTGAATTTATGAATGCAAGTTATTTAACCGCTGATGAACGTC
AATCAATCGACTTACGCAATCTACAAAATTGGACGAACCTTGTACTGAGTTTATGTAATGATCTTGTTTCAGTTAAAAAA
GAATTACGTCAAGGCGATTGGCATAATTATGGAGCAATTGTTGCATTAAAACGAGGTATGAGTATTCCTGAAGCCTTAGA
AATAGTCGCCAATGAGCATAATCATTGTATTCAACAATTTATAACAACTACCACTCAACTGAAAAATTGTAGCGTGGCAC
TTCAAAAAGTATTAAACGGTATGATGACATTGATGCGCGGAAATTATGATTGGTCGGATATTACTAGCCGTTATGCTACT
AAACTTACCGAATTGTCGTATGCTGCATGA

Upstream 100 bases:

>100_bases
ATAGATTAAGGTAGTACCAAGGTAATTTAACCTACTCGCCATGTGTCGCCGTGAGAAGCGCAGATGGTAGCCCGTGTAGA
ACGTGTAGATGAGGTATGTT

Downstream 100 bases:

>100_bases
AACGTAGAGATGAATTATTTGCTGAAACAACCAATTTGCATTAGGTTTGTCAAGCATCTAGGAGATTGACTCAATGCCAA
CCCGTACTACATTGCATCAC

Product: terpene synthase metal-binding domain-containing protein

Products: NA

Alternate protein names: EIZS; Sesquiterpene cyclase; Sesquiterpene synthase [H]

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MPNTAHLQQLARTVPATIPKLESPFPAQIHPLAAEVQQQTTKWVLEQGLLSEARRKAFLDYNYTLLIARCYPYASVERLQ
IISDWNAWLFELDDQCDEARIGHDPQALARLHQRLGAVIRGATVAADEPLLVTALADIMGRMRALAPLAWFEVFTQQVDD
YFIGNQWEAHNRLYSIIPSEIEYLHYRKFTSAVAIYIAFIEFMNASYLTADERQSIDLRNLQNWTNLVLSLCNDLVSVKK
ELRQGDWHNYGAIVALKRGMSIPEALEIVANEHNHCIQQFITTTTQLKNCSVALQKVLNGMMTLMRGNYDWSDITSRYAT
KLTELSYAA

Sequences:

>Translated_329_residues
MPNTAHLQQLARTVPATIPKLESPFPAQIHPLAAEVQQQTTKWVLEQGLLSEARRKAFLDYNYTLLIARCYPYASVERLQ
IISDWNAWLFELDDQCDEARIGHDPQALARLHQRLGAVIRGATVAADEPLLVTALADIMGRMRALAPLAWFEVFTQQVDD
YFIGNQWEAHNRLYSIIPSEIEYLHYRKFTSAVAIYIAFIEFMNASYLTADERQSIDLRNLQNWTNLVLSLCNDLVSVKK
ELRQGDWHNYGAIVALKRGMSIPEALEIVANEHNHCIQQFITTTTQLKNCSVALQKVLNGMMTLMRGNYDWSDITSRYAT
KLTELSYAA
>Mature_328_residues
PNTAHLQQLARTVPATIPKLESPFPAQIHPLAAEVQQQTTKWVLEQGLLSEARRKAFLDYNYTLLIARCYPYASVERLQI
ISDWNAWLFELDDQCDEARIGHDPQALARLHQRLGAVIRGATVAADEPLLVTALADIMGRMRALAPLAWFEVFTQQVDDY
FIGNQWEAHNRLYSIIPSEIEYLHYRKFTSAVAIYIAFIEFMNASYLTADERQSIDLRNLQNWTNLVLSLCNDLVSVKKE
LRQGDWHNYGAIVALKRGMSIPEALEIVANEHNHCIQQFITTTTQLKNCSVALQKVLNGMMTLMRGNYDWSDITSRYATK
LTELSYAA

Specific function: Catalyzes the cyclization of farnesyl diphosphate (FPP) to the sesquiterpene epi-isozizaene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terpene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005630
- InterPro:   IPR008949 [H]

Pfam domain/function: PF03936 Terpene_synth_C [H]

EC number: =4.2.3.37 [H]

Molecular weight: Translated: 37550; Mature: 37419

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNTAHLQQLARTVPATIPKLESPFPAQIHPLAAEVQQQTTKWVLEQGLLSEARRKAFLD
CCCHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YNYTLLIARCYPYASVERLQIISDWNAWLFELDDQCDEARIGHDPQALARLHQRLGAVIR
CCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GATVAADEPLLVTALADIMGRMRALAPLAWFEVFTQQVDDYFIGNQWEAHNRLYSIIPSE
CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IEYLHYRKFTSAVAIYIAFIEFMNASYLTADERQSIDLRNLQNWTNLVLSLCNDLVSVKK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ELRQGDWHNYGAIVALKRGMSIPEALEIVANEHNHCIQQFITTTTQLKNCSVALQKVLNG
HHHCCCCCCCCHHHEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMTLMRGNYDWSDITSRYATKLTELSYAA
HHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PNTAHLQQLARTVPATIPKLESPFPAQIHPLAAEVQQQTTKWVLEQGLLSEARRKAFLD
CCHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YNYTLLIARCYPYASVERLQIISDWNAWLFELDDQCDEARIGHDPQALARLHQRLGAVIR
CCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GATVAADEPLLVTALADIMGRMRALAPLAWFEVFTQQVDDYFIGNQWEAHNRLYSIIPSE
CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IEYLHYRKFTSAVAIYIAFIEFMNASYLTADERQSIDLRNLQNWTNLVLSLCNDLVSVKK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ELRQGDWHNYGAIVALKRGMSIPEALEIVANEHNHCIQQFITTTTQLKNCSVALQKVLNG
HHHCCCCCCCCHHHEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMTLMRGNYDWSDITSRYATKLTELSYAA
HHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]