Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159899411

Identifier: 159899411

GI number: 159899411

Start: 3663592

End: 3664656

Strand: Reverse

Name: 159899411

Synonym: Haur_2892

Alternate gene names: NA

Gene position: 3664656-3663592 (Counterclockwise)

Preceding gene: 159899412

Following gene: 159899408

Centisome position: 57.74

GC content: 50.33

Gene sequence:

>1065_bases
ATGAATGATGCAATGCTGACTGTCGCCACTGCCTTAGCTCAAATTCGCGCTGGGGTCGAAGATTTCGGTGGTCGCCCAAT
TAATGGCACGTTGGTTTTAGATAACAATATTGAATTTTTGCCGCGTGGACTGGTGGCAACTGCCATCGAAGCCAAAAATT
GCACCAAATTGCGCTATTTGCCCAAAGATTTGCATGCAGGGCGCTTAGATCTCAGTGGTTGTACCGGTTTGACCAGCATT
CCTGAAGGTTTGCACTGTTTTGAACTTGATCTCCGTGGTACCAGCATTGAGCATTTGCCCTTGGTGCATGTGCAAAATCG
GCTGAACCTGAGCAACAATATTCATCTCAAGAGTTTGCCGCGCAATCTCAAAGTTGGCTCGTTGGTGCTGCGCGGTTGCA
GTGCGCTCGAAAGCCTGCCCGAAGGAATTGATGTTAATTTTCTTGATTTGACCGATTGTGTTAATTTTCGGCGTTGGCCA
AGCACAGGCCGCATCAGCGTTGGACGGATTGTGGCTCGCAACTGTATCAACATGCCCAATTTGCCCAATTGGCTCGGCGA
ATTGGCTCAGCTCAGTGTGCGTGGTTGCAGCAGCCTAACCGAATTGCCAGCAGGCTTGGTAGTCCACTCGTGGCTCGATT
TGGGTAATACTGAAATTAGCTGCCTGCCTGCGGATAGCCAAGTTAGCCAATTGCGCTGGAATGGCGTGCCAATTGATGAG
CGGATCGCCTTCCAACCTGAAACAATCAGCGTTAGCGAAATTATCGACGAAGTTAATGTTGAGCGGCGGCGGGTGTTGCT
CGAACGCAAAGGCTACGAAGAATTTTTTGCCCAAGCTGAAGCCAAAGAGCTTGATCGCGACCGTGATACTGGTGGCGTGC
GGCGCTTGTTGCAAATGCCCATGCCCAACGATGAAGATTTGGTTTGTTTGGCGGTGCAATGTCCTTCAACTGATCGACGC
TATGTCTTGCGTGTGCCACCAACTATGCAGAGTTGCCATCAAGCCGCCGCTTGGATCGCGGGCTTCGATAACCCTGATGA
TTACAAACTGCTGAAAGAAACCTAG

Upstream 100 bases:

>100_bases
CAACGCGAATATTCACCCCAAGAAATTCGCCGAGTCGTTGATTAATGCTGCGACTGGTGGTAATACTCTCCTGTTACCAC
CAGCCCTTGAGGATAGTTCG

Downstream 100 bases:

>100_bases
TTTGTTAGCTAGTGCGAGCGTTCCCTCACCCCCAACCCCTCTCCCGCTGCGGCAGGCGAGGGGTGTTTGGTTTGGTGGTT
CCCCCTCGCCTCGCGTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNDAMLTVATALAQIRAGVEDFGGRPINGTLVLDNNIEFLPRGLVATAIEAKNCTKLRYLPKDLHAGRLDLSGCTGLTSI
PEGLHCFELDLRGTSIEHLPLVHVQNRLNLSNNIHLKSLPRNLKVGSLVLRGCSALESLPEGIDVNFLDLTDCVNFRRWP
STGRISVGRIVARNCINMPNLPNWLGELAQLSVRGCSSLTELPAGLVVHSWLDLGNTEISCLPADSQVSQLRWNGVPIDE
RIAFQPETISVSEIIDEVNVERRRVLLERKGYEEFFAQAEAKELDRDRDTGGVRRLLQMPMPNDEDLVCLAVQCPSTDRR
YVLRVPPTMQSCHQAAAWIAGFDNPDDYKLLKET

Sequences:

>Translated_354_residues
MNDAMLTVATALAQIRAGVEDFGGRPINGTLVLDNNIEFLPRGLVATAIEAKNCTKLRYLPKDLHAGRLDLSGCTGLTSI
PEGLHCFELDLRGTSIEHLPLVHVQNRLNLSNNIHLKSLPRNLKVGSLVLRGCSALESLPEGIDVNFLDLTDCVNFRRWP
STGRISVGRIVARNCINMPNLPNWLGELAQLSVRGCSSLTELPAGLVVHSWLDLGNTEISCLPADSQVSQLRWNGVPIDE
RIAFQPETISVSEIIDEVNVERRRVLLERKGYEEFFAQAEAKELDRDRDTGGVRRLLQMPMPNDEDLVCLAVQCPSTDRR
YVLRVPPTMQSCHQAAAWIAGFDNPDDYKLLKET
>Mature_354_residues
MNDAMLTVATALAQIRAGVEDFGGRPINGTLVLDNNIEFLPRGLVATAIEAKNCTKLRYLPKDLHAGRLDLSGCTGLTSI
PEGLHCFELDLRGTSIEHLPLVHVQNRLNLSNNIHLKSLPRNLKVGSLVLRGCSALESLPEGIDVNFLDLTDCVNFRRWP
STGRISVGRIVARNCINMPNLPNWLGELAQLSVRGCSSLTELPAGLVVHSWLDLGNTEISCLPADSQVSQLRWNGVPIDE
RIAFQPETISVSEIIDEVNVERRRVLLERKGYEEFFAQAEAKELDRDRDTGGVRRLLQMPMPNDEDLVCLAVQCPSTDRR
YVLRVPPTMQSCHQAAAWIAGFDNPDDYKLLKET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39296; Mature: 39296

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDAMLTVATALAQIRAGVEDFGGRPINGTLVLDNNIEFLPRGLVATAIEAKNCTKLRYL
CCCHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCCCHHCCCHHHHHHCCCCCCEEEEC
PKDLHAGRLDLSGCTGLTSIPEGLHCFELDLRGTSIEHLPLVHVQNRLNLSNNIHLKSLP
CHHHCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHCCCCCCEEEECCC
RNLKVGSLVLRGCSALESLPEGIDVNFLDLTDCVNFRRWPSTGRISVGRIVARNCINMPN
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCC
LPNWLGELAQLSVRGCSSLTELPAGLVVHSWLDLGNTEISCLPADSQVSQLRWNGVPIDE
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCCCC
RIAFQPETISVSEIIDEVNVERRRVLLERKGYEEFFAQAEAKELDRDRDTGGVRRLLQMP
CEECCCCCEEHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
MPNDEDLVCLAVQCPSTDRRYVLRVPPTMQSCHQAAAWIAGFDNPDDYKLLKET
CCCCCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHCCCC
>Mature Secondary Structure
MNDAMLTVATALAQIRAGVEDFGGRPINGTLVLDNNIEFLPRGLVATAIEAKNCTKLRYL
CCCHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCCCHHCCCHHHHHHCCCCCCEEEEC
PKDLHAGRLDLSGCTGLTSIPEGLHCFELDLRGTSIEHLPLVHVQNRLNLSNNIHLKSLP
CHHHCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHCCCCCCEEEECCC
RNLKVGSLVLRGCSALESLPEGIDVNFLDLTDCVNFRRWPSTGRISVGRIVARNCINMPN
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCC
LPNWLGELAQLSVRGCSSLTELPAGLVVHSWLDLGNTEISCLPADSQVSQLRWNGVPIDE
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCCCC
RIAFQPETISVSEIIDEVNVERRRVLLERKGYEEFFAQAEAKELDRDRDTGGVRRLLQMP
CEECCCCCEEHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
MPNDEDLVCLAVQCPSTDRRYVLRVPPTMQSCHQAAAWIAGFDNPDDYKLLKET
CCCCCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA