Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899235

Identifier: 159899235

GI number: 159899235

Start: 3471022

End: 3472659

Strand: Reverse

Name: 159899235

Synonym: Haur_2716

Alternate gene names: NA

Gene position: 3472659-3471022 (Counterclockwise)

Preceding gene: 159899245

Following gene: 159899234

Centisome position: 54.72

GC content: 49.76

Gene sequence:

>1638_bases
ATGAACAACAGGCAGCTAGCCCTGTTCGTATGCTTGTGCGCGGTGTTGCTTGGCTTTACTATGGCTAAACGCTCCGAGGC
AATCAGCGCCAATGGACTGTTACCTTCAACCCACAATCAAAGCATCGATCCGCTTGCCTCTGATCGTAAGATGCTCCCTA
CTCCAACCTGTGTGGTAAACCCGCCAACGCCAACGCAATGGATTCGGCCCAATGCTACTGTTACCCCTACTCGGCAGCAG
CCAACATTAACCGAAAGACCAACCTTTACCGCAACTCCAAATGATCCCTGTTTTGTCGAGCCAAAGGTGATTATCACAGC
ACCAAGCCAGGTCGAGGTTGGCGAGCTATTCACCATCTCAATCCAGTATATCAATCTGGCCTCACCCTCGACCTCTCTCT
GGGCTAGTGATGGCGGTTTAGCCCATTTTGAGCCACCAATGAATGAAATATGTGTTGCTGAGCAACACCCAACGCATTGC
ACGAGCTTTACCCTACGAGCCACCAATCCAGGGGTTTTTGATTTTGATGCAGCGGCATTAGGCGAAGCTTATTACAATGG
TGGTTGGCACCTCATTTGGATTGAAGCCCAAGCGCCAGTTTTTATTAATATTATTGATTGGAATTCAACGCCAACGTCAA
CCTTTACGCCTGTGCCAACCTGCATACCTGCTACCAGCACCCCAACCTCAAATATACCAACAAATACGCCAACGCTGGCT
GGTCAGGCGACAGCCACTTCGGCCCCAATCCCAACCCGTACTCCAACCCCAACTGCTGCCCCCTTGACATGCTACCAAAC
CGCATATGCCGAGTTGGTGTTGCATGCCCCAAGCCAAGTGCAGGTTGGCGATATTTTTACCTTGACAATGAATTATGTGA
ATATTGCCCCTTATACCGTCAATATTAGCCGCGCCTCGAATGATTTAGCGATGTTTGATCCGCCGCTAGCAATGCCTTGC
CAACGATTCTCGCACCCTACTTCATGTGAAGAGATAACCATGCGGGCGACTTCCGCTGGTGAATTAACGATCGATGCTAG
TGCTTTTGGCCTGATTTTCATTAGTGGTCAACAGGCGGAGGATGGGTATGCGAATGCTCGCAATCCAGTTTATATTAATA
TTCTGCCAAACAATGCCATACCAACCCGTACACCAACTCCGACCGCTACCAAAACTGCTACACCATGCCCAACGAACTTA
GCAATCAGCGGCAGTGGTTGTGGCGGAACCTCAACTATTACACCAATCAATGGCACCGCAACGGCTACGCCGATTGTTTC
AGAGTTGTTTTTGAGTGCGCCATACCTGGTCAATGTTGGTGACGTTTTTACCGCGACGATCCAGTATATCAATATTGGGA
TGCCCTATACGAGGGTTACCAATTGGTCAGGCGGAATTGGGCAATTTGATCCACCATTGATCATGCCATGTAAATTCAAT
CAGCATCCAACCCAGTGTCGCACCATTCGGTTGCGGGCAATTGCCGCAGGCTCCCTTCACCTTAGCGCTCGAGCAACTGG
CGAGGTGCCAATTGCTGGGGGTGGTTGGGCTTGGGGCAGTGCTTTTTCAAACCCAATTTCGATTCAAGTGCGCGACGTAT
TAGCATATCGGATTTTTATTCCGCTGGCGAGAAAATAA

Upstream 100 bases:

>100_bases
GATATTTCGGTTAATGGGCTATTTGTCCTATAGCAGGATTAGGCTTGGTTGAGGAATACTAAGGTTGTAAGCTCATTAAT
GTTTAGCGAGGAGGAACCCC

Downstream 100 bases:

>100_bases
ACTGCTGAGTTGATTAAACAGCAACCGATCGCTATGGCAGCGATCGGTTGCTGTTTAATTCAGTTTAAATTTATTATTCA
TAGCAAGCTTCTTTAATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MNNRQLALFVCLCAVLLGFTMAKRSEAISANGLLPSTHNQSIDPLASDRKMLPTPTCVVNPPTPTQWIRPNATVTPTRQQ
PTLTERPTFTATPNDPCFVEPKVIITAPSQVEVGELFTISIQYINLASPSTSLWASDGGLAHFEPPMNEICVAEQHPTHC
TSFTLRATNPGVFDFDAAALGEAYYNGGWHLIWIEAQAPVFINIIDWNSTPTSTFTPVPTCIPATSTPTSNIPTNTPTLA
GQATATSAPIPTRTPTPTAAPLTCYQTAYAELVLHAPSQVQVGDIFTLTMNYVNIAPYTVNISRASNDLAMFDPPLAMPC
QRFSHPTSCEEITMRATSAGELTIDASAFGLIFISGQQAEDGYANARNPVYINILPNNAIPTRTPTPTATKTATPCPTNL
AISGSGCGGTSTITPINGTATATPIVSELFLSAPYLVNVGDVFTATIQYINIGMPYTRVTNWSGGIGQFDPPLIMPCKFN
QHPTQCRTIRLRAIAAGSLHLSARATGEVPIAGGGWAWGSAFSNPISIQVRDVLAYRIFIPLARK

Sequences:

>Translated_545_residues
MNNRQLALFVCLCAVLLGFTMAKRSEAISANGLLPSTHNQSIDPLASDRKMLPTPTCVVNPPTPTQWIRPNATVTPTRQQ
PTLTERPTFTATPNDPCFVEPKVIITAPSQVEVGELFTISIQYINLASPSTSLWASDGGLAHFEPPMNEICVAEQHPTHC
TSFTLRATNPGVFDFDAAALGEAYYNGGWHLIWIEAQAPVFINIIDWNSTPTSTFTPVPTCIPATSTPTSNIPTNTPTLA
GQATATSAPIPTRTPTPTAAPLTCYQTAYAELVLHAPSQVQVGDIFTLTMNYVNIAPYTVNISRASNDLAMFDPPLAMPC
QRFSHPTSCEEITMRATSAGELTIDASAFGLIFISGQQAEDGYANARNPVYINILPNNAIPTRTPTPTATKTATPCPTNL
AISGSGCGGTSTITPINGTATATPIVSELFLSAPYLVNVGDVFTATIQYINIGMPYTRVTNWSGGIGQFDPPLIMPCKFN
QHPTQCRTIRLRAIAAGSLHLSARATGEVPIAGGGWAWGSAFSNPISIQVRDVLAYRIFIPLARK
>Mature_545_residues
MNNRQLALFVCLCAVLLGFTMAKRSEAISANGLLPSTHNQSIDPLASDRKMLPTPTCVVNPPTPTQWIRPNATVTPTRQQ
PTLTERPTFTATPNDPCFVEPKVIITAPSQVEVGELFTISIQYINLASPSTSLWASDGGLAHFEPPMNEICVAEQHPTHC
TSFTLRATNPGVFDFDAAALGEAYYNGGWHLIWIEAQAPVFINIIDWNSTPTSTFTPVPTCIPATSTPTSNIPTNTPTLA
GQATATSAPIPTRTPTPTAAPLTCYQTAYAELVLHAPSQVQVGDIFTLTMNYVNIAPYTVNISRASNDLAMFDPPLAMPC
QRFSHPTSCEEITMRATSAGELTIDASAFGLIFISGQQAEDGYANARNPVYINILPNNAIPTRTPTPTATKTATPCPTNL
AISGSGCGGTSTITPINGTATATPIVSELFLSAPYLVNVGDVFTATIQYINIGMPYTRVTNWSGGIGQFDPPLIMPCKFN
QHPTQCRTIRLRAIAAGSLHLSARATGEVPIAGGGWAWGSAFSNPISIQVRDVLAYRIFIPLARK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58293; Mature: 58293

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRQLALFVCLCAVLLGFTMAKRSEAISANGLLPSTHNQSIDPLASDRKMLPTPTCVVN
CCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
PPTPTQWIRPNATVTPTRQQPTLTERPTFTATPNDPCFVEPKVIITAPSQVEVGELFTIS
CCCCCCEECCCCEECCCCCCCCCCCCCEEEECCCCCEEECCEEEEECCCCEECCEEEEEE
IQYINLASPSTSLWASDGGLAHFEPPMNEICVAEQHPTHCTSFTLRATNPGVFDFDAAAL
EEEEEECCCCCEEEECCCCEEECCCCHHHEEECCCCCCCCEEEEEEECCCCEEECCHHHH
GEAYYNGGWHLIWIEAQAPVFINIIDWNSTPTSTFTPVPTCIPATSTPTSNIPTNTPTLA
HHHEECCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GQATATSAPIPTRTPTPTAAPLTCYQTAYAELVLHAPSQVQVGDIFTLTMNYVNIAPYTV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCEEECEEEEEEEEEEEEEEEEE
NISRASNDLAMFDPPLAMPCQRFSHPTSCEEITMRATSAGELTIDASAFGLIFISGQQAE
EEECCCCCCEEECCCCCCHHHHCCCCCCCHHEEEEECCCCCEEEECCEEEEEEEECCCCC
DGYANARNPVYINILPNNAIPTRTPTPTATKTATPCPTNLAISGSGCGGTSTITPINGTA
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCC
TATPIVSELFLSAPYLVNVGDVFTATIQYINIGMPYTRVTNWSGGIGQFDPPLIMPCKFN
CHHHHHHHHHHCCCCEEECCHHHEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCC
QHPTQCRTIRLRAIAAGSLHLSARATGEVPIAGGGWAWGSAFSNPISIQVRDVLAYRIFI
CCCCCEEEEEEEEEEECCEEEEEECCCCEEECCCCCCCHHHCCCCEEEEEHHEEEEEEEE
PLARK
EECCC
>Mature Secondary Structure
MNNRQLALFVCLCAVLLGFTMAKRSEAISANGLLPSTHNQSIDPLASDRKMLPTPTCVVN
CCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
PPTPTQWIRPNATVTPTRQQPTLTERPTFTATPNDPCFVEPKVIITAPSQVEVGELFTIS
CCCCCCEECCCCEECCCCCCCCCCCCCEEEECCCCCEEECCEEEEECCCCEECCEEEEEE
IQYINLASPSTSLWASDGGLAHFEPPMNEICVAEQHPTHCTSFTLRATNPGVFDFDAAAL
EEEEEECCCCCEEEECCCCEEECCCCHHHEEECCCCCCCCEEEEEEECCCCEEECCHHHH
GEAYYNGGWHLIWIEAQAPVFINIIDWNSTPTSTFTPVPTCIPATSTPTSNIPTNTPTLA
HHHEECCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GQATATSAPIPTRTPTPTAAPLTCYQTAYAELVLHAPSQVQVGDIFTLTMNYVNIAPYTV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCEEECEEEEEEEEEEEEEEEEE
NISRASNDLAMFDPPLAMPCQRFSHPTSCEEITMRATSAGELTIDASAFGLIFISGQQAE
EEECCCCCCEEECCCCCCHHHHCCCCCCCHHEEEEECCCCCEEEECCEEEEEEEECCCCC
DGYANARNPVYINILPNNAIPTRTPTPTATKTATPCPTNLAISGSGCGGTSTITPINGTA
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCC
TATPIVSELFLSAPYLVNVGDVFTATIQYINIGMPYTRVTNWSGGIGQFDPPLIMPCKFN
CHHHHHHHHHHCCCCEEECCHHHEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCC
QHPTQCRTIRLRAIAAGSLHLSARATGEVPIAGGGWAWGSAFSNPISIQVRDVLAYRIFI
CCCCCEEEEEEEEEEECCEEEEEECCCCEEECCCCCCCHHHCCCCEEEEEHHEEEEEEEE
PLARK
EECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA