Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899245

Identifier: 159899245

GI number: 159899245

Start: 3480806

End: 3482587

Strand: Reverse

Name: 159899245

Synonym: Haur_2726

Alternate gene names: NA

Gene position: 3482587-3480806 (Counterclockwise)

Preceding gene: 159899249

Following gene: 159899235

Centisome position: 54.87

GC content: 47.25

Gene sequence:

>1782_bases
ATGCATCTGAAAACGATAATCGGTCTGGGCAGCATGCTGCTTGGTTTGGCGACCGCTGGAATTGGTCATGCCCAACAAAC
CATTGCAACGCAGGCGGCTGCTTCGATTTTTACCGTAACCACCTTTAATGATGAAGTTAATCAGAATGGCCAATGCTCGT
TGCGCGAGGCAATTGTGGCGGCCAATACCAACAGTGTCAGCGCCGATTGTGGCAATGGAGCGCTAGTCACGACGATCAAT
TTAGCCAGCGGAACCTATACGCTGAATATCGATAACCCTGCGCCAGTTGGCACGGAGTTTCGGCTTGATGATAATAGCGG
CTTATATGGCGATTTGGATATTACCGATACGCTGAGTTTGGTCGGCGCGGCTCCGAATCTGACGATCATTAGTGGCCTGA
GTGTCGCCAATACCAATCGAATTCTGCATATTCATAGTGGTACGGTTAATCTGAGCAACCTGAGCTTAATCGAAGCACAT
AGCCCATGGAATGGTGCTGCAATTTATAATCAAGGCCAGCTAACCATCAATAATGTTAATCTGAATAATAATCAGACCGT
TTTGAATCTGAATTACAACGATAATCTCGCTGCCTTACATGGCGGAGCAATCTACAATGCTGGCAGTTTATCGATTAGTA
ATAGTGCATTGATTGGTAATCGTACTGCCGCAACCTTGCATGATTTTAATGGCGGAGCAATTTATAATACCGCTCAGTTA
ACAATTAATGCGGTTGACTTTCGCCAAAATCAAGCAGTCAATGGTGGGGCAATTTATAGCACTTCGACCGATCAACAATT
AAGCATTAGTACCAGCGAATTTACTGATAACGAAGCAATCATTGTGAACGATAACGAAGATCCGCAAGGTGGTGCGTTGT
GGTTGAATAGCACCAAGACGATCAGCAATACGATCTTTCGGAGCAACGAGGCCAATGCTGGTGGTGCAATCTATGCGCTC
AAGGCTTTGACGATCAATACGAGCATCTTTGATCGCAATGCTGCTGGAAGTGGCAATGGGATTGCTCATGGCACGGCAAT
TCATAGCAAAGGCCAGTCGAATATTAATCGCAGTATCTTTAAATTCAATGCTGGTGATTCAGCAGCGATTGGTAATGCTG
GCACGATGCAACTTGATCGCGCTACAATCATCAATAATTCCAATCGAGCAATTGAATTTATGGGCACTGCGCCAATTGGC
ACTGGCGGCGGAGTTCACAACACCAATCAATTAACCATTATCAATAGCACGATTAGCAATAATACGGCTAATTTGGCGGG
TGCAGGGATTTATAATTCGCGCTCATTGCACTTGATCAACACTAGTGTGATTAGCAATGGCATTAAATTTGGCGATGAAG
ATGGAGTTGGCGGTGGAATTTATACGCTACCCGCCAGTACGAGCTACCTTACCAATACCTTGATCAGCCTCAATACAGCG
CCTGCGGGAGCCGATTGCTGGGGGGCGACGCAAGGTTTTTATGCGCTGATTAGCGAGCTTGATGATTGCCAACTGGCTGG
CAATACGAATCTTGGTGATCTCGCGGCTCAAACCAGCCCGCTAACCCAAGTTGATGACTACACTTGGGTTGCACCATTAA
CCCAAACCAGCCCAGCGGTTGATGCGGGCAACAACCAAGCCTGCCCCGCGAGCGATCAACGCGGTCAATCACGGCCAATC
GATGGCAATGGCGATTTGTTGGCTCGCTGCGATCTTGGTGCTTACGAATTTGTTTCGACCCAAACCTTCTACCATCAATT
TGCCCCTTGGGCCACCCGCTAA

Upstream 100 bases:

>100_bases
CTCACCTCAATCTGGTGCCAACCATAGTCGTACCCATACACCCTAATTTCGATATAGTTCATGGGTAGTGGTTCGATTTT
TTATAGTACGAGGTTTTGGT

Downstream 100 bases:

>100_bases
AATGCCAAAGCGGCGCGATCCTCGTTGATCGTGCCGCTTATTCCTCAATCCACAAGCAAACTAGGTTACTCAGCTAGGCG
ATAGCCAACACCCCATTCGG

Product: polymorphic outer membrane protein

Products: NA

Alternate protein names: Adhesin-Like Protein

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MHLKTIIGLGSMLLGLATAGIGHAQQTIATQAAASIFTVTTFNDEVNQNGQCSLREAIVAANTNSVSADCGNGALVTTIN
LASGTYTLNIDNPAPVGTEFRLDDNSGLYGDLDITDTLSLVGAAPNLTIISGLSVANTNRILHIHSGTVNLSNLSLIEAH
SPWNGAAIYNQGQLTINNVNLNNNQTVLNLNYNDNLAALHGGAIYNAGSLSISNSALIGNRTAATLHDFNGGAIYNTAQL
TINAVDFRQNQAVNGGAIYSTSTDQQLSISTSEFTDNEAIIVNDNEDPQGGALWLNSTKTISNTIFRSNEANAGGAIYAL
KALTINTSIFDRNAAGSGNGIAHGTAIHSKGQSNINRSIFKFNAGDSAAIGNAGTMQLDRATIINNSNRAIEFMGTAPIG
TGGGVHNTNQLTIINSTISNNTANLAGAGIYNSRSLHLINTSVISNGIKFGDEDGVGGGIYTLPASTSYLTNTLISLNTA
PAGADCWGATQGFYALISELDDCQLAGNTNLGDLAAQTSPLTQVDDYTWVAPLTQTSPAVDAGNNQACPASDQRGQSRPI
DGNGDLLARCDLGAYEFVSTQTFYHQFAPWATR

Sequences:

>Translated_593_residues
MHLKTIIGLGSMLLGLATAGIGHAQQTIATQAAASIFTVTTFNDEVNQNGQCSLREAIVAANTNSVSADCGNGALVTTIN
LASGTYTLNIDNPAPVGTEFRLDDNSGLYGDLDITDTLSLVGAAPNLTIISGLSVANTNRILHIHSGTVNLSNLSLIEAH
SPWNGAAIYNQGQLTINNVNLNNNQTVLNLNYNDNLAALHGGAIYNAGSLSISNSALIGNRTAATLHDFNGGAIYNTAQL
TINAVDFRQNQAVNGGAIYSTSTDQQLSISTSEFTDNEAIIVNDNEDPQGGALWLNSTKTISNTIFRSNEANAGGAIYAL
KALTINTSIFDRNAAGSGNGIAHGTAIHSKGQSNINRSIFKFNAGDSAAIGNAGTMQLDRATIINNSNRAIEFMGTAPIG
TGGGVHNTNQLTIINSTISNNTANLAGAGIYNSRSLHLINTSVISNGIKFGDEDGVGGGIYTLPASTSYLTNTLISLNTA
PAGADCWGATQGFYALISELDDCQLAGNTNLGDLAAQTSPLTQVDDYTWVAPLTQTSPAVDAGNNQACPASDQRGQSRPI
DGNGDLLARCDLGAYEFVSTQTFYHQFAPWATR
>Mature_593_residues
MHLKTIIGLGSMLLGLATAGIGHAQQTIATQAAASIFTVTTFNDEVNQNGQCSLREAIVAANTNSVSADCGNGALVTTIN
LASGTYTLNIDNPAPVGTEFRLDDNSGLYGDLDITDTLSLVGAAPNLTIISGLSVANTNRILHIHSGTVNLSNLSLIEAH
SPWNGAAIYNQGQLTINNVNLNNNQTVLNLNYNDNLAALHGGAIYNAGSLSISNSALIGNRTAATLHDFNGGAIYNTAQL
TINAVDFRQNQAVNGGAIYSTSTDQQLSISTSEFTDNEAIIVNDNEDPQGGALWLNSTKTISNTIFRSNEANAGGAIYAL
KALTINTSIFDRNAAGSGNGIAHGTAIHSKGQSNINRSIFKFNAGDSAAIGNAGTMQLDRATIINNSNRAIEFMGTAPIG
TGGGVHNTNQLTIINSTISNNTANLAGAGIYNSRSLHLINTSVISNGIKFGDEDGVGGGIYTLPASTSYLTNTLISLNTA
PAGADCWGATQGFYALISELDDCQLAGNTNLGDLAAQTSPLTQVDDYTWVAPLTQTSPAVDAGNNQACPASDQRGQSRPI
DGNGDLLARCDLGAYEFVSTQTFYHQFAPWATR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61713; Mature: 61713

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLKTIIGLGSMLLGLATAGIGHAQQTIATQAAASIFTVTTFNDEVNQNGQCSLREAIVA
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEEEEECHHCCCCCCEEHEEEEEE
ANTNSVSADCGNGALVTTINLASGTYTLNIDNPAPVGTEFRLDDNSGLYGDLDITDTLSL
ECCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCEEEECCCCCCEEECCHHHHHHH
VGAAPNLTIISGLSVANTNRILHIHSGTVNLSNLSLIEAHSPWNGAAIYNQGQLTINNVN
HCCCCCEEEEECCEEECCCEEEEEECCEEEECCEEEEEECCCCCCEEEEECCEEEEEEEE
LNNNQTVLNLNYNDNLAALHGGAIYNAGSLSISNSALIGNRTAATLHDFNGGAIYNTAQL
CCCCCEEEEECCCCCEEEEECCEEEECCCEEECCCEEECCCCEEEEEECCCCEEEEEEEE
TINAVDFRQNQAVNGGAIYSTSTDQQLSISTSEFTDNEAIIVNDNEDPQGGALWLNSTKT
EEEEEECCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCEEEEECCCH
ISNTIFRSNEANAGGAIYALKALTINTSIFDRNAAGSGNGIAHGTAIHSKGQSNINRSIF
HHHHEEECCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCEECEEECCCCCCCCCCEEE
KFNAGDSAAIGNAGTMQLDRATIINNSNRAIEFMGTAPIGTGGGVHNTNQLTIINSTISN
EECCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC
NTANLAGAGIYNSRSLHLINTSVISNGIKFGDEDGVGGGIYTLPASTSYLTNTLISLNTA
CCCCEEECCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHEEEEEEECC
PAGADCWGATQGFYALISELDDCQLAGNTNLGDLAAQTSPLTQVDDYTWVAPLTQTSPAV
CCCCCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCC
DAGNNQACPASDQRGQSRPIDGNGDLLARCDLGAYEFVSTQTFYHQFAPWATR
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHLKTIIGLGSMLLGLATAGIGHAQQTIATQAAASIFTVTTFNDEVNQNGQCSLREAIVA
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEEEEECHHCCCCCCEEHEEEEEE
ANTNSVSADCGNGALVTTINLASGTYTLNIDNPAPVGTEFRLDDNSGLYGDLDITDTLSL
ECCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCEEEECCCCCCEEECCHHHHHHH
VGAAPNLTIISGLSVANTNRILHIHSGTVNLSNLSLIEAHSPWNGAAIYNQGQLTINNVN
HCCCCCEEEEECCEEECCCEEEEEECCEEEECCEEEEEECCCCCCEEEEECCEEEEEEEE
LNNNQTVLNLNYNDNLAALHGGAIYNAGSLSISNSALIGNRTAATLHDFNGGAIYNTAQL
CCCCCEEEEECCCCCEEEEECCEEEECCCEEECCCEEECCCCEEEEEECCCCEEEEEEEE
TINAVDFRQNQAVNGGAIYSTSTDQQLSISTSEFTDNEAIIVNDNEDPQGGALWLNSTKT
EEEEEECCCCCCCCCCEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCEEEEECCCH
ISNTIFRSNEANAGGAIYALKALTINTSIFDRNAAGSGNGIAHGTAIHSKGQSNINRSIF
HHHHEEECCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCEECEEECCCCCCCCCCEEE
KFNAGDSAAIGNAGTMQLDRATIINNSNRAIEFMGTAPIGTGGGVHNTNQLTIINSTISN
EECCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCC
NTANLAGAGIYNSRSLHLINTSVISNGIKFGDEDGVGGGIYTLPASTSYLTNTLISLNTA
CCCCEEECCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHEEEEEEECC
PAGADCWGATQGFYALISELDDCQLAGNTNLGDLAAQTSPLTQVDDYTWVAPLTQTSPAV
CCCCCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCC
DAGNNQACPASDQRGQSRPIDGNGDLLARCDLGAYEFVSTQTFYHQFAPWATR
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA