| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899234
Identifier: 159899234
GI number: 159899234
Start: 3469111
End: 3470799
Strand: Reverse
Name: 159899234
Synonym: Haur_2715
Alternate gene names: NA
Gene position: 3470799-3469111 (Counterclockwise)
Preceding gene: 159899235
Following gene: 159899233
Centisome position: 54.69
GC content: 51.45
Gene sequence:
>1689_bases ATGAATAACAGGCGGCTGGCCCTGTTAGTGAGCTTGTGTGCAGTGTTGCTTGGCTTTGCTGTGGCTAAACGACCTGAAGT AACAAGCGCCAAGGCGTTATTAACGCCAACTCCAACACCACTTCGTTCAGAATTAATTCTGAGCGGCCCGACCGAAGTCC AAGTTGGTCAACTGTTCACAATTACGATTCAGTACGTCAATATTGGTTTGCCCTACACCACAATCACGATGAGTCCGAAC AATCTGGCTCAATTTGATCCGCCGATGACGATGCCTTGTAAGTACAATGAACATCCAACAGGTTGTCAATCGATTACATT ACGGGCAACAACTGGGGGAATGCTAGAAATCTTCGCATCGGCGACTGGCGAAGTGCCAATTGCTGGCGGTGGTTGGGCTT GGGGTAGCGCTCAAGCACGGAATCCAATTTGGATCGATGTGATTGATCCGAATGCGACTGCCACGCCAACTCCTATGCCA ACCTGTGTGCCTGCGACCCGAACCCCAACGTCTACGATGTTGCCAACCTATACCCCAACTCCAGCAGGTCAGGCGACTGC CACGCCAACTCCAACCAAAACTCGCACACCAACACCAACAGCTCTGCCATGCCAACAAACTTCATATGCCGAGTTGCTGT TGAGTGCCCCAAGCCAAGTCCGAGTTGGCGATGTCTTTACGCTAACGATTGATTATGTGAATATTGGTGCGCCAGATACT GGCATTAGCCTCAGCCCCAATGGCTTGGCTCAAGTTGAAGCGCCATCAGTCATGCCCTGCGATTTCTTTGAAGACCCAAC CCATTGTACCAAAATCCGCTTGCGGGCAACCGCTGTAGGCGAATTAACGATTGATGCCTGGGCAACTGGTGAATTGTTTA TTGATGGCGGCTGGATGTGGGGTGGGGCACGGGCACGTAATCCTGTGTATGTAAATATTGTGGCGGGTGATGGCACACCA ACCTTTACGCCAACACCGACTAAGACTGGCACGCCAACTCCAACCTTCCCAAGCTATCCATGCTATACGCCAACCACACG GCCAATTCAGAAGCAAGCACCCCAAGTAACCCAAGCGCCGTGTACTCCAACGCCAACTTCAACCGCAACGCCGACCTTTC CAAGTGCACCATGTTTCACGCCAACCGCTCAACCATTGAATAGCAATCGCGTGCAAACAACCCAAGTGCCGTGTACGCCA ACCCCAACGGCTACTAAAACGGCCACTCCATGCCCAACCAACTTGGCGATGCGCGGTAGTACTTGTATCGGAACCCCAAC GATCACGCCAAACCGTGGGAGTCCGACCATTACGCCAATTGTTTCAGAATTGATTTTGAGTGCGCCGCCATTGGTCAATG TTGGTGATGCATTCAGTTTGACGATTCAGTATGTCAATATTGGCGTGCCCTATACTGGAATTACGCTCAGCCCAACCGGA ACTGTCCAATTCGATCCACCATTGACGATGCCATGTAAATTCAATGAGCACCCAACCGATTGCCGCACGATTGGTTTGCG GGCGGTTGCGCCTGGTACGATTACGATTAATGCCGGAGCGAATGGCGAAGTGCCAATTTCTGGTGGTGGCTGGGCTTGGG GTAGCGCTCATGCACGGAATCCTATTAATGTTCAAGTACGCAGCGTTTTAGCCCACAAAGCCTTTATTCCGTTCGTCAAA ACCCAATAA
Upstream 100 bases:
>100_bases TAGCTTGTTTTTTGGGCCATTTGTCCTATAGCAGGATTAGGCTTAGTTGATGAATACTTAGAAGCCTAGGCCGATTAATC TCATATAGAGGAGGACCCCT
Downstream 100 bases:
>100_bases ACCGCTGATTTCAAACCTGCTCAACCGATCGTCGCTAGGGCGATCGGTTGATATTTAAACATAATTCTTCAAGGTTAGAA GTGATAGTTCTTTAGATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MNNRRLALLVSLCAVLLGFAVAKRPEVTSAKALLTPTPTPLRSELILSGPTEVQVGQLFTITIQYVNIGLPYTTITMSPN NLAQFDPPMTMPCKYNEHPTGCQSITLRATTGGMLEIFASATGEVPIAGGGWAWGSAQARNPIWIDVIDPNATATPTPMP TCVPATRTPTSTMLPTYTPTPAGQATATPTPTKTRTPTPTALPCQQTSYAELLLSAPSQVRVGDVFTLTIDYVNIGAPDT GISLSPNGLAQVEAPSVMPCDFFEDPTHCTKIRLRATAVGELTIDAWATGELFIDGGWMWGGARARNPVYVNIVAGDGTP TFTPTPTKTGTPTPTFPSYPCYTPTTRPIQKQAPQVTQAPCTPTPTSTATPTFPSAPCFTPTAQPLNSNRVQTTQVPCTP TPTATKTATPCPTNLAMRGSTCIGTPTITPNRGSPTITPIVSELILSAPPLVNVGDAFSLTIQYVNIGVPYTGITLSPTG TVQFDPPLTMPCKFNEHPTDCRTIGLRAVAPGTITINAGANGEVPISGGGWAWGSAHARNPINVQVRSVLAHKAFIPFVK TQ
Sequences:
>Translated_562_residues MNNRRLALLVSLCAVLLGFAVAKRPEVTSAKALLTPTPTPLRSELILSGPTEVQVGQLFTITIQYVNIGLPYTTITMSPN NLAQFDPPMTMPCKYNEHPTGCQSITLRATTGGMLEIFASATGEVPIAGGGWAWGSAQARNPIWIDVIDPNATATPTPMP TCVPATRTPTSTMLPTYTPTPAGQATATPTPTKTRTPTPTALPCQQTSYAELLLSAPSQVRVGDVFTLTIDYVNIGAPDT GISLSPNGLAQVEAPSVMPCDFFEDPTHCTKIRLRATAVGELTIDAWATGELFIDGGWMWGGARARNPVYVNIVAGDGTP TFTPTPTKTGTPTPTFPSYPCYTPTTRPIQKQAPQVTQAPCTPTPTSTATPTFPSAPCFTPTAQPLNSNRVQTTQVPCTP TPTATKTATPCPTNLAMRGSTCIGTPTITPNRGSPTITPIVSELILSAPPLVNVGDAFSLTIQYVNIGVPYTGITLSPTG TVQFDPPLTMPCKFNEHPTDCRTIGLRAVAPGTITINAGANGEVPISGGGWAWGSAHARNPINVQVRSVLAHKAFIPFVK TQ >Mature_562_residues MNNRRLALLVSLCAVLLGFAVAKRPEVTSAKALLTPTPTPLRSELILSGPTEVQVGQLFTITIQYVNIGLPYTTITMSPN NLAQFDPPMTMPCKYNEHPTGCQSITLRATTGGMLEIFASATGEVPIAGGGWAWGSAQARNPIWIDVIDPNATATPTPMP TCVPATRTPTSTMLPTYTPTPAGQATATPTPTKTRTPTPTALPCQQTSYAELLLSAPSQVRVGDVFTLTIDYVNIGAPDT GISLSPNGLAQVEAPSVMPCDFFEDPTHCTKIRLRATAVGELTIDAWATGELFIDGGWMWGGARARNPVYVNIVAGDGTP TFTPTPTKTGTPTPTFPSYPCYTPTTRPIQKQAPQVTQAPCTPTPTSTATPTFPSAPCFTPTAQPLNSNRVQTTQVPCTP TPTATKTATPCPTNLAMRGSTCIGTPTITPNRGSPTITPIVSELILSAPPLVNVGDAFSLTIQYVNIGVPYTGITLSPTG TVQFDPPLTMPCKFNEHPTDCRTIGLRAVAPGTITINAGANGEVPISGGGWAWGSAHARNPINVQVRSVLAHKAFIPFVK TQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59187; Mature: 59187
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNRRLALLVSLCAVLLGFAVAKRPEVTSAKALLTPTPTPLRSELILSGPTEVQVGQLFT CCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEECCCCEEEECEEEE ITIQYVNIGLPYTTITMSPNNLAQFDPPMTMPCKYNEHPTGCQSITLRATTGGMLEIFAS EEEEEEEECCCEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEC ATGEVPIAGGGWAWGSAQARNPIWIDVIDPNATATPTPMPTCVPATRTPTSTMLPTYTPT CCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAGQATATPTPTKTRTPTPTALPCQQTSYAELLLSAPSQVRVGDVFTLTIDYVNIGAPDT CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECEEEEEEEEEEEECCCCC GISLSPNGLAQVEAPSVMPCDFFEDPTHCTKIRLRATAVGELTIDAWATGELFIDGGWMW CCEECCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCEEEEECCEEE GGARARNPVYVNIVAGDGTPTFTPTPTKTGTPTPTFPSYPCYTPTTRPIQKQAPQVTQAP CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC CTPTPTSTATPTFPSAPCFTPTAQPLNSNRVQTTQVPCTPTPTATKTATPCPTNLAMRGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCC TCIGTPTITPNRGSPTITPIVSELILSAPPLVNVGDAFSLTIQYVNIGVPYTGITLSPTG EEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCEEEEEEEEEECCCCCCEEECCCC TVQFDPPLTMPCKFNEHPTDCRTIGLRAVAPGTITINAGANGEVPISGGGWAWGSAHARN EEEECCCCCCCCCCCCCCCCHHEEEEEEECCCEEEEECCCCCCEEECCCCCCCCCCCCCC PINVQVRSVLAHKAFIPFVKTQ CCEEEHHHHHHHHHHCCEEECC >Mature Secondary Structure MNNRRLALLVSLCAVLLGFAVAKRPEVTSAKALLTPTPTPLRSELILSGPTEVQVGQLFT CCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEECCCCEEEECEEEE ITIQYVNIGLPYTTITMSPNNLAQFDPPMTMPCKYNEHPTGCQSITLRATTGGMLEIFAS EEEEEEEECCCEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEC ATGEVPIAGGGWAWGSAQARNPIWIDVIDPNATATPTPMPTCVPATRTPTSTMLPTYTPT CCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAGQATATPTPTKTRTPTPTALPCQQTSYAELLLSAPSQVRVGDVFTLTIDYVNIGAPDT CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECEEEEEEEEEEEECCCCC GISLSPNGLAQVEAPSVMPCDFFEDPTHCTKIRLRATAVGELTIDAWATGELFIDGGWMW CCEECCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCEEEEECCEEE GGARARNPVYVNIVAGDGTPTFTPTPTKTGTPTPTFPSYPCYTPTTRPIQKQAPQVTQAP CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCC CTPTPTSTATPTFPSAPCFTPTAQPLNSNRVQTTQVPCTPTPTATKTATPCPTNLAMRGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCC TCIGTPTITPNRGSPTITPIVSELILSAPPLVNVGDAFSLTIQYVNIGVPYTGITLSPTG EEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCEEEEEEEEEECCCCCCEEECCCC TVQFDPPLTMPCKFNEHPTDCRTIGLRAVAPGTITINAGANGEVPISGGGWAWGSAHARN EEEECCCCCCCCCCCCCCCCHHEEEEEEECCCEEEEECCCCCCEEECCCCCCCCCCCCCC PINVQVRSVLAHKAFIPFVKTQ CCEEEHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA