Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899198

Identifier: 159899198

GI number: 159899198

Start: 3436016

End: 3436930

Strand: Reverse

Name: 159899198

Synonym: Haur_2679

Alternate gene names: NA

Gene position: 3436930-3436016 (Counterclockwise)

Preceding gene: 159899199

Following gene: 159899196

Centisome position: 54.15

GC content: 51.26

Gene sequence:

>915_bases
ATGAGTTGGCCACGGTTTTGGCTAGGCTTGTGGTTGTTTGGGCTAGGCCTAAGTTACAGCAATGTGATTGATCTGCTGAG
CGTGCTGCAACCATGGTTTTTTGCGCCAGCCCTGCCATTATTGCTGTGGGCAATTCCGCAACGGCGGCGCTGGCTGAGTG
TAATGGCAATCTTTATCGGTTTGATCTGGCTTTGGTTGTATGCTGAGCGTTGGTTACCTCAACCAAGACCCGATACAACG
CCAGCCTTACGCCTGCTCAGTTGGAATGTAGCTGGTTGGAATTTAAATAGCGTTGATATTCTACGAGTGATCGATGATGA
ACAACCCGATTTAATTGCCCTGCAAGAAGTCGATGTCGGTTTGGGTAAACCATTACAAACAGCCTTGGCTAGCAAGTATC
CGTATGTTGAATTTCGCCCAGCGAGCGGAGCGGCACAACCAGCCGATTTGGCCTTGTGGAGCAAATGGCCGTTTGCGCTG
ATTCATCCATGTGCCTATTGGCAATGCTATCGGCGAGCCTATCGCGTGCAGCACCCCCAACAACCCTTAATTTTGGTGAA
TGTGCATATTGAGCATAGCCCGATTCGTTGGCTCAGGTTCGAGCGTGAGCGTGAAGAGGCAGCGATTGGGCAAATGATCG
CTGATTTTGGCCAAACAACCGAGCCAGTGCTCTTGGCTGGCGATTTTAATACGGTTGAGCAACAGGCGGGCTATGCGGCG
TTGAACACGGTTTGGGGTGATAGTTGGCACGAACGCGGGGTGGGTATGGGTTTTAGTTGGCCGCAGCGATCGTGGCATCC
GCCCATAGTCCGCATCGACTATATCTGGCATAACGCAGCAATCCGTCCAATCCAGCTTGAAACAGGGGCTGGCGTATCTG
ATCATCGGTATTTGATTGGTGCGTTTGATTTTTGA

Upstream 100 bases:

>100_bases
ATTGGCTGTGGAGCGCGATTAATCCGCGTGGCGCGAATTTTCTCAGTTTTGGTTTGATGCTCTATTTGACAGTGTGGTAT
CGCGCACGAGCACGCCGCGC

Downstream 100 bases:

>100_bases
TCCACAAAGGGCACGCAGCTACACAAAGGAGTGGTTATGGCGTTCTTCGTGCTCTTCGTGGTTAAAAGCTCTGCCCTTTA
ACTTTTTCGCAACCGATTGA

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSWPRFWLGLWLFGLGLSYSNVIDLLSVLQPWFFAPALPLLLWAIPQRRRWLSVMAIFIGLIWLWLYAERWLPQPRPDTT
PALRLLSWNVAGWNLNSVDILRVIDDEQPDLIALQEVDVGLGKPLQTALASKYPYVEFRPASGAAQPADLALWSKWPFAL
IHPCAYWQCYRRAYRVQHPQQPLILVNVHIEHSPIRWLRFEREREEAAIGQMIADFGQTTEPVLLAGDFNTVEQQAGYAA
LNTVWGDSWHERGVGMGFSWPQRSWHPPIVRIDYIWHNAAIRPIQLETGAGVSDHRYLIGAFDF

Sequences:

>Translated_304_residues
MSWPRFWLGLWLFGLGLSYSNVIDLLSVLQPWFFAPALPLLLWAIPQRRRWLSVMAIFIGLIWLWLYAERWLPQPRPDTT
PALRLLSWNVAGWNLNSVDILRVIDDEQPDLIALQEVDVGLGKPLQTALASKYPYVEFRPASGAAQPADLALWSKWPFAL
IHPCAYWQCYRRAYRVQHPQQPLILVNVHIEHSPIRWLRFEREREEAAIGQMIADFGQTTEPVLLAGDFNTVEQQAGYAA
LNTVWGDSWHERGVGMGFSWPQRSWHPPIVRIDYIWHNAAIRPIQLETGAGVSDHRYLIGAFDF
>Mature_303_residues
SWPRFWLGLWLFGLGLSYSNVIDLLSVLQPWFFAPALPLLLWAIPQRRRWLSVMAIFIGLIWLWLYAERWLPQPRPDTTP
ALRLLSWNVAGWNLNSVDILRVIDDEQPDLIALQEVDVGLGKPLQTALASKYPYVEFRPASGAAQPADLALWSKWPFALI
HPCAYWQCYRRAYRVQHPQQPLILVNVHIEHSPIRWLRFEREREEAAIGQMIADFGQTTEPVLLAGDFNTVEQQAGYAAL
NTVWGDSWHERGVGMGFSWPQRSWHPPIVRIDYIWHNAAIRPIQLETGAGVSDHRYLIGAFDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35100; Mature: 34969

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWPRFWLGLWLFGLGLSYSNVIDLLSVLQPWFFAPALPLLLWAIPQRRRWLSVMAIFIG
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LIWLWLYAERWLPQPRPDTTPALRLLSWNVAGWNLNSVDILRVIDDEQPDLIALQEVDVG
HHHHHHHHHHHCCCCCCCCCHHHHEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCC
LGKPLQTALASKYPYVEFRPASGAAQPADLALWSKWPFALIHPCAYWQCYRRAYRVQHPQ
CCCHHHHHHHCCCCCEEEECCCCCCCCCCEEHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
QPLILVNVHIEHSPIRWLRFEREREEAAIGQMIADFGQTTEPVLLAGDFNTVEQQAGYAA
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCHHH
LNTVWGDSWHERGVGMGFSWPQRSWHPPIVRIDYIWHNAAIRPIQLETGAGVSDHRYLIG
HHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCEEEEE
AFDF
ECCC
>Mature Secondary Structure 
SWPRFWLGLWLFGLGLSYSNVIDLLSVLQPWFFAPALPLLLWAIPQRRRWLSVMAIFIG
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LIWLWLYAERWLPQPRPDTTPALRLLSWNVAGWNLNSVDILRVIDDEQPDLIALQEVDVG
HHHHHHHHHHHCCCCCCCCCHHHHEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCC
LGKPLQTALASKYPYVEFRPASGAAQPADLALWSKWPFALIHPCAYWQCYRRAYRVQHPQ
CCCHHHHHHHCCCCCEEEECCCCCCCCCCEEHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
QPLILVNVHIEHSPIRWLRFEREREEAAIGQMIADFGQTTEPVLLAGDFNTVEQQAGYAA
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCHHH
LNTVWGDSWHERGVGMGFSWPQRSWHPPIVRIDYIWHNAAIRPIQLETGAGVSDHRYLIG
HHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCEEEEE
AFDF
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA