| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899198
Identifier: 159899198
GI number: 159899198
Start: 3436016
End: 3436930
Strand: Reverse
Name: 159899198
Synonym: Haur_2679
Alternate gene names: NA
Gene position: 3436930-3436016 (Counterclockwise)
Preceding gene: 159899199
Following gene: 159899196
Centisome position: 54.15
GC content: 51.26
Gene sequence:
>915_bases ATGAGTTGGCCACGGTTTTGGCTAGGCTTGTGGTTGTTTGGGCTAGGCCTAAGTTACAGCAATGTGATTGATCTGCTGAG CGTGCTGCAACCATGGTTTTTTGCGCCAGCCCTGCCATTATTGCTGTGGGCAATTCCGCAACGGCGGCGCTGGCTGAGTG TAATGGCAATCTTTATCGGTTTGATCTGGCTTTGGTTGTATGCTGAGCGTTGGTTACCTCAACCAAGACCCGATACAACG CCAGCCTTACGCCTGCTCAGTTGGAATGTAGCTGGTTGGAATTTAAATAGCGTTGATATTCTACGAGTGATCGATGATGA ACAACCCGATTTAATTGCCCTGCAAGAAGTCGATGTCGGTTTGGGTAAACCATTACAAACAGCCTTGGCTAGCAAGTATC CGTATGTTGAATTTCGCCCAGCGAGCGGAGCGGCACAACCAGCCGATTTGGCCTTGTGGAGCAAATGGCCGTTTGCGCTG ATTCATCCATGTGCCTATTGGCAATGCTATCGGCGAGCCTATCGCGTGCAGCACCCCCAACAACCCTTAATTTTGGTGAA TGTGCATATTGAGCATAGCCCGATTCGTTGGCTCAGGTTCGAGCGTGAGCGTGAAGAGGCAGCGATTGGGCAAATGATCG CTGATTTTGGCCAAACAACCGAGCCAGTGCTCTTGGCTGGCGATTTTAATACGGTTGAGCAACAGGCGGGCTATGCGGCG TTGAACACGGTTTGGGGTGATAGTTGGCACGAACGCGGGGTGGGTATGGGTTTTAGTTGGCCGCAGCGATCGTGGCATCC GCCCATAGTCCGCATCGACTATATCTGGCATAACGCAGCAATCCGTCCAATCCAGCTTGAAACAGGGGCTGGCGTATCTG ATCATCGGTATTTGATTGGTGCGTTTGATTTTTGA
Upstream 100 bases:
>100_bases ATTGGCTGTGGAGCGCGATTAATCCGCGTGGCGCGAATTTTCTCAGTTTTGGTTTGATGCTCTATTTGACAGTGTGGTAT CGCGCACGAGCACGCCGCGC
Downstream 100 bases:
>100_bases TCCACAAAGGGCACGCAGCTACACAAAGGAGTGGTTATGGCGTTCTTCGTGCTCTTCGTGGTTAAAAGCTCTGCCCTTTA ACTTTTTCGCAACCGATTGA
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSWPRFWLGLWLFGLGLSYSNVIDLLSVLQPWFFAPALPLLLWAIPQRRRWLSVMAIFIGLIWLWLYAERWLPQPRPDTT PALRLLSWNVAGWNLNSVDILRVIDDEQPDLIALQEVDVGLGKPLQTALASKYPYVEFRPASGAAQPADLALWSKWPFAL IHPCAYWQCYRRAYRVQHPQQPLILVNVHIEHSPIRWLRFEREREEAAIGQMIADFGQTTEPVLLAGDFNTVEQQAGYAA LNTVWGDSWHERGVGMGFSWPQRSWHPPIVRIDYIWHNAAIRPIQLETGAGVSDHRYLIGAFDF
Sequences:
>Translated_304_residues MSWPRFWLGLWLFGLGLSYSNVIDLLSVLQPWFFAPALPLLLWAIPQRRRWLSVMAIFIGLIWLWLYAERWLPQPRPDTT PALRLLSWNVAGWNLNSVDILRVIDDEQPDLIALQEVDVGLGKPLQTALASKYPYVEFRPASGAAQPADLALWSKWPFAL IHPCAYWQCYRRAYRVQHPQQPLILVNVHIEHSPIRWLRFEREREEAAIGQMIADFGQTTEPVLLAGDFNTVEQQAGYAA LNTVWGDSWHERGVGMGFSWPQRSWHPPIVRIDYIWHNAAIRPIQLETGAGVSDHRYLIGAFDF >Mature_303_residues SWPRFWLGLWLFGLGLSYSNVIDLLSVLQPWFFAPALPLLLWAIPQRRRWLSVMAIFIGLIWLWLYAERWLPQPRPDTTP ALRLLSWNVAGWNLNSVDILRVIDDEQPDLIALQEVDVGLGKPLQTALASKYPYVEFRPASGAAQPADLALWSKWPFALI HPCAYWQCYRRAYRVQHPQQPLILVNVHIEHSPIRWLRFEREREEAAIGQMIADFGQTTEPVLLAGDFNTVEQQAGYAAL NTVWGDSWHERGVGMGFSWPQRSWHPPIVRIDYIWHNAAIRPIQLETGAGVSDHRYLIGAFDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35100; Mature: 34969
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWPRFWLGLWLFGLGLSYSNVIDLLSVLQPWFFAPALPLLLWAIPQRRRWLSVMAIFIG CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LIWLWLYAERWLPQPRPDTTPALRLLSWNVAGWNLNSVDILRVIDDEQPDLIALQEVDVG HHHHHHHHHHHCCCCCCCCCHHHHEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCC LGKPLQTALASKYPYVEFRPASGAAQPADLALWSKWPFALIHPCAYWQCYRRAYRVQHPQ CCCHHHHHHHCCCCCEEEECCCCCCCCCCEEHCCCCCHHHHHHHHHHHHHHHHHHCCCCC QPLILVNVHIEHSPIRWLRFEREREEAAIGQMIADFGQTTEPVLLAGDFNTVEQQAGYAA CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCHHH LNTVWGDSWHERGVGMGFSWPQRSWHPPIVRIDYIWHNAAIRPIQLETGAGVSDHRYLIG HHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCEEEEE AFDF ECCC >Mature Secondary Structure SWPRFWLGLWLFGLGLSYSNVIDLLSVLQPWFFAPALPLLLWAIPQRRRWLSVMAIFIG CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LIWLWLYAERWLPQPRPDTTPALRLLSWNVAGWNLNSVDILRVIDDEQPDLIALQEVDVG HHHHHHHHHHHCCCCCCCCCHHHHEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCC LGKPLQTALASKYPYVEFRPASGAAQPADLALWSKWPFALIHPCAYWQCYRRAYRVQHPQ CCCHHHHHHHCCCCCEEEECCCCCCCCCCEEHCCCCCHHHHHHHHHHHHHHHHHHCCCCC QPLILVNVHIEHSPIRWLRFEREREEAAIGQMIADFGQTTEPVLLAGDFNTVEQQAGYAA CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCHHH LNTVWGDSWHERGVGMGFSWPQRSWHPPIVRIDYIWHNAAIRPIQLETGAGVSDHRYLIG HHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCEEEEE AFDF ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA