| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is wbbL [H]
Identifier: 159899197
GI number: 159899197
Start: 3433413
End: 3435938
Strand: Direct
Name: wbbL [H]
Synonym: Haur_2678
Alternate gene names: 159899197
Gene position: 3433413-3435938 (Clockwise)
Preceding gene: 159899194
Following gene: 159899202
Centisome position: 54.1
GC content: 50.08
Gene sequence:
>2526_bases ATGGATCGGCCCAGCGTTTCGATCATTGTGATCAATTTCAATGGTAAAAAACACCTCGTTGATTGTTTAAATTCGTTGTT TGTTCAGCGCTACCCAAGCAGTGCGCTTGAAATAATTGTCGTCGATAATGCCTCGCACGATGGCTCCTGCGACTTACTTC GTCAGCAATTTCCCAAGGTTCGTTTAATTGAAAATCGTGAGAATCTGGGTTTTGCTCCGGCAGTCAATCAGGCGGTACGG CTCAGTCAAGCCCAATATGTTGCCTTGATCAATAACGATGCCAAAGCCGATCCCAACTGGATCGAGCATTTAGTTGCCGA TATCGAAGCGCATAAAGCCGAAAAGGTAATTGCGGTTGGGGCAAAAATGCTCGATTGGGAAGGCCAACAGATTGATTTTA TCCAAGCGGCGTTGAATGTCTTTGGCCATGGCAATCAGCCATTTACGCGCATGCCAACTGCTAGCATCGCAGGCCAAGCT GGCCCACAACTCTTTGCTTGTGGCGGGGCTATGCTGGCCGATCGGGCGTTTTTTTTGGCAATTGGCGGCTTCGACGAAAG CTATTTTGCCTATTTTGAAGATGTCGATTTTGGCTGGCGAGCATGGTTGTTGGGCTACCAAATTCGTTTTAATCCATCAG CGCTGGTCTATCATCGCCAACATGCCACCGCCAACACTATGGGCGGACATCAAATTCGCGCCTTACTTGAGCGCAACGCC CTACGCACCATCATCAAACATTATGCCGATGAGCAATTGTGGCGCATTCTGCCAGCTGCCATTTTGCTGATTATTCAGCG TAGTTTGCTCGATGGCAGCGGTGGCTTTGATCGCAAAGAATTCGATTTACGGCTGCGCAAACAGGGCGACCAAACCAGCA CCATGCAAGTTCCCAAGATTATGTTGAGTTACATCGCGGCTTTGGGCGATGTGCTTGATGGCTGGGATAGCTTGTGGGCT GAGCGTGAACGCTTGCAAACGCTTCGCCAACGTAGCGATGCTGAATTATTTAATTTGTTTGAACAACCATTTGGCCTGAT CGATCTTGATGTGCGTTTGCATATGCAGCAGCAAACCATGGTTGAAAGCTTTAAATTGCGAGAACTTATGCCCAACCCAA CCACGAATGTGCTGATTGTCAGCATTGATCCCTTGCAAGCAGCCTTGGCTGGCCCGGCGATTCGCAGCGTGCAAATTGCC AAACAACTGAGCCACTCCTGCAAAGTTGTGCTAGCAGCGCCCGATCAGGCCGATCTTGCCATTCCAAATGTTCAAACCAT CGCCTTTCCTAGCAACGATGGCCGCAGCTTGGGTGAGTTGGCGCTAAATGCCGAGGTCATTATTGTTCAAGGCTATAGTT TGCAAAAATATCCCCAATTGCTGAATGCTGAACGCATTTTGGTGGTCGATCTCTACGATCCCTTCCATTTTGAAGCCCTT GAATTAGCCGAACGCCGTGGCCTCAGTTTAGAACGAGCGCTTGAACTGAATGATGCCAGCGTGGCAGCCTTGACGCAACA ACTAGCGCTTGGCGATTTCTTTATCTGTGCCAGCGAACGCCAACGTGATTTGTGGCTGGGAGCCTTGACCGTTAGCAAGC GCTTGACTCCCGAACACTATCGCAATGATCCAACCTTACGCAAGTTGATCGATATTGTGCCATTTGGCTTGCCCAGTGAG CCACCCCAAGCCACTCAGCCAGTGATGCGTGGCGTAATTGAGGGCATTCAGCAAAACGATGTAATTGCATTATGGGGCGG CGGCATCTGGGAATGGCTTGATCCATTGACGATCATTCGGGCCATGGCCGAATTGCAGCAGAGCCACCCCCAATTAAAGC TGGTCTTTATGGGTGGGCAACACCCGAATACCCAAGATGTTGGGGTGATGCAGCGGTATAGCGAAGCAGTTGAGCTAGCA AAACAGCTGGGTTTATACGCCAAAACGGTCTTTTTCAATCAAACATGGGTCGCCTATGATCAACGGGTCAACTATTTGCT TGAGGCCGATTTAGGAGTTAGCGCTCATCATAATCATACTGAAACCCGTTTTGCCTTTCGCACGCGATTGCTCGATTACC TCTGGGCCAGCTTGCCAATGATCGTTTCGGCAGGCGATAGTTTGGCCGATTTGGTGCAGCAACAACAGCTTGGTCAGGTT GTCGCAATCGAAGATGTCCAGGGCTGGGTCGCCGCTTTAACCCATGCCGCCGATCATCCTTCCGATCGTCAGCAACGCCA AGCCCAATTTGCCAACATTCAACAAGCCTATACCTGGGAACAAGCTTGTGCGCCGTTGGTCGAGTTTTGTCGCCAACCAC AGTATGCTGCCGATAAACGCCGCAACGTCAAAGCCCAAGGCCAACAATCAGGCCAAACCAGCATGCGCTACCGTATGGAT GAGCTTGATCGGGCGGTTGCCGAGAAAAATGAGCATATCGCCCAGCTTGAGCAGCATATCAAAGCGCTAGAAAACGGTAA AGTCATGCGCTTGTTAAAGTGGGTCAATCGGTTGCGAAAAAGTTAA
Upstream 100 bases:
>100_bases TACTCCGTCGCAAAAAACATTCTTGCAGCTATTGTATGCAGATTGGCGTTTTATGGTACGATGCTGGCTGATTGTGGCCT TTAATTCCGAAGGGTTGTGC
Downstream 100 bases:
>100_bases AGGGCAGAGCTTTTAACCACGAAGAGCACGAAGAACGCCATAACCACTCCTTTGTGTAGCTGCGTGCCCTTTGTGGATCA AAAATCAAACGCACCAATCA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Rhamnosyltransferase [H]
Number of amino acids: Translated: 841; Mature: 841
Protein sequence:
>841_residues MDRPSVSIIVINFNGKKHLVDCLNSLFVQRYPSSALEIIVVDNASHDGSCDLLRQQFPKVRLIENRENLGFAPAVNQAVR LSQAQYVALINNDAKADPNWIEHLVADIEAHKAEKVIAVGAKMLDWEGQQIDFIQAALNVFGHGNQPFTRMPTASIAGQA GPQLFACGGAMLADRAFFLAIGGFDESYFAYFEDVDFGWRAWLLGYQIRFNPSALVYHRQHATANTMGGHQIRALLERNA LRTIIKHYADEQLWRILPAAILLIIQRSLLDGSGGFDRKEFDLRLRKQGDQTSTMQVPKIMLSYIAALGDVLDGWDSLWA ERERLQTLRQRSDAELFNLFEQPFGLIDLDVRLHMQQQTMVESFKLRELMPNPTTNVLIVSIDPLQAALAGPAIRSVQIA KQLSHSCKVVLAAPDQADLAIPNVQTIAFPSNDGRSLGELALNAEVIIVQGYSLQKYPQLLNAERILVVDLYDPFHFEAL ELAERRGLSLERALELNDASVAALTQQLALGDFFICASERQRDLWLGALTVSKRLTPEHYRNDPTLRKLIDIVPFGLPSE PPQATQPVMRGVIEGIQQNDVIALWGGGIWEWLDPLTIIRAMAELQQSHPQLKLVFMGGQHPNTQDVGVMQRYSEAVELA KQLGLYAKTVFFNQTWVAYDQRVNYLLEADLGVSAHHNHTETRFAFRTRLLDYLWASLPMIVSAGDSLADLVQQQQLGQV VAIEDVQGWVAALTHAADHPSDRQQRQAQFANIQQAYTWEQACAPLVEFCRQPQYAADKRRNVKAQGQQSGQTSMRYRMD ELDRAVAEKNEHIAQLEQHIKALENGKVMRLLKWVNRLRKS
Sequences:
>Translated_841_residues MDRPSVSIIVINFNGKKHLVDCLNSLFVQRYPSSALEIIVVDNASHDGSCDLLRQQFPKVRLIENRENLGFAPAVNQAVR LSQAQYVALINNDAKADPNWIEHLVADIEAHKAEKVIAVGAKMLDWEGQQIDFIQAALNVFGHGNQPFTRMPTASIAGQA GPQLFACGGAMLADRAFFLAIGGFDESYFAYFEDVDFGWRAWLLGYQIRFNPSALVYHRQHATANTMGGHQIRALLERNA LRTIIKHYADEQLWRILPAAILLIIQRSLLDGSGGFDRKEFDLRLRKQGDQTSTMQVPKIMLSYIAALGDVLDGWDSLWA ERERLQTLRQRSDAELFNLFEQPFGLIDLDVRLHMQQQTMVESFKLRELMPNPTTNVLIVSIDPLQAALAGPAIRSVQIA KQLSHSCKVVLAAPDQADLAIPNVQTIAFPSNDGRSLGELALNAEVIIVQGYSLQKYPQLLNAERILVVDLYDPFHFEAL ELAERRGLSLERALELNDASVAALTQQLALGDFFICASERQRDLWLGALTVSKRLTPEHYRNDPTLRKLIDIVPFGLPSE PPQATQPVMRGVIEGIQQNDVIALWGGGIWEWLDPLTIIRAMAELQQSHPQLKLVFMGGQHPNTQDVGVMQRYSEAVELA KQLGLYAKTVFFNQTWVAYDQRVNYLLEADLGVSAHHNHTETRFAFRTRLLDYLWASLPMIVSAGDSLADLVQQQQLGQV VAIEDVQGWVAALTHAADHPSDRQQRQAQFANIQQAYTWEQACAPLVEFCRQPQYAADKRRNVKAQGQQSGQTSMRYRMD ELDRAVAEKNEHIAQLEQHIKALENGKVMRLLKWVNRLRKS >Mature_841_residues MDRPSVSIIVINFNGKKHLVDCLNSLFVQRYPSSALEIIVVDNASHDGSCDLLRQQFPKVRLIENRENLGFAPAVNQAVR LSQAQYVALINNDAKADPNWIEHLVADIEAHKAEKVIAVGAKMLDWEGQQIDFIQAALNVFGHGNQPFTRMPTASIAGQA GPQLFACGGAMLADRAFFLAIGGFDESYFAYFEDVDFGWRAWLLGYQIRFNPSALVYHRQHATANTMGGHQIRALLERNA LRTIIKHYADEQLWRILPAAILLIIQRSLLDGSGGFDRKEFDLRLRKQGDQTSTMQVPKIMLSYIAALGDVLDGWDSLWA ERERLQTLRQRSDAELFNLFEQPFGLIDLDVRLHMQQQTMVESFKLRELMPNPTTNVLIVSIDPLQAALAGPAIRSVQIA KQLSHSCKVVLAAPDQADLAIPNVQTIAFPSNDGRSLGELALNAEVIIVQGYSLQKYPQLLNAERILVVDLYDPFHFEAL ELAERRGLSLERALELNDASVAALTQQLALGDFFICASERQRDLWLGALTVSKRLTPEHYRNDPTLRKLIDIVPFGLPSE PPQATQPVMRGVIEGIQQNDVIALWGGGIWEWLDPLTIIRAMAELQQSHPQLKLVFMGGQHPNTQDVGVMQRYSEAVELA KQLGLYAKTVFFNQTWVAYDQRVNYLLEADLGVSAHHNHTETRFAFRTRLLDYLWASLPMIVSAGDSLADLVQQQQLGQV VAIEDVQGWVAALTHAADHPSDRQQRQAQFANIQQAYTWEQACAPLVEFCRQPQYAADKRRNVKAQGQQSGQTSMRYRMD ELDRAVAEKNEHIAQLEQHIKALENGKVMRLLKWVNRLRKS
Specific function: Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the undecaprenyl-pyrophosphoryl
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 94692; Mature: 94692
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRPSVSIIVINFNGKKHLVDCLNSLFVQRYPSSALEIIVVDNASHDGSCDLLRQQFPKV CCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCCE RLIENRENLGFAPAVNQAVRLSQAQYVALINNDAKADPNWIEHLVADIEAHKAEKVIAVG EEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC AKMLDWEGQQIDFIQAALNVFGHGNQPFTRMPTASIAGQAGPQLFACGGAMLADRAFFLA CHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEECCCHHHHCCEEEEE IGGFDESYFAYFEDVDFGWRAWLLGYQIRFNPSALVYHRQHATANTMGGHQIRALLERNA ECCCCCHHHHHHHCCCCCCEEEHEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHH LRTIIKHYADEQLWRILPAAILLIIQRSLLDGSGGFDRKEFDLRLRKQGDQTSTMQVPKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH MLSYIAALGDVLDGWDSLWAERERLQTLRQRSDAELFNLFEQPFGLIDLDVRLHMQQQTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEHHHHHHH VESFKLRELMPNPTTNVLIVSIDPLQAALAGPAIRSVQIAKQLSHSCKVVLAAPDQADLA HHHHHHHHHCCCCCCCEEEEEECHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC IPNVQTIAFPSNDGRSLGELALNAEVIIVQGYSLQKYPQLLNAERILVVDLYDPFHFEAL CCCEEEEEECCCCCCCHHHHHCCCEEEEEECCCHHHHHHHHCCCEEEEEEECCCCCHHHH ELAERRGLSLERALELNDASVAALTQQLALGDFFICASERQRDLWLGALTVSKRLTPEHY HHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEHHHHCCCHHHH RNDPTLRKLIDIVPFGLPSEPPQATQPVMRGVIEGIQQNDVIALWGGGIWEWLDPLTIIR CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH AMAELQQSHPQLKLVFMGGQHPNTQDVGVMQRYSEAVELAKQLGLYAKTVFFNQTWVAYD HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHEECCHHHHHH QRVNYLLEADLGVSAHHNHTETRFAFRTRLLDYLWASLPMIVSAGDSLADLVQQQQLGQV HHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCE VAIEDVQGWVAALTHAADHPSDRQQRQAQFANIQQAYTWEQACAPLVEFCRQPQYAADKR EEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RNVKAQGQQSGQTSMRYRMDELDRAVAEKNEHIAQLEQHIKALENGKVMRLLKWVNRLRK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC S C >Mature Secondary Structure MDRPSVSIIVINFNGKKHLVDCLNSLFVQRYPSSALEIIVVDNASHDGSCDLLRQQFPKV CCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCCE RLIENRENLGFAPAVNQAVRLSQAQYVALINNDAKADPNWIEHLVADIEAHKAEKVIAVG EEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC AKMLDWEGQQIDFIQAALNVFGHGNQPFTRMPTASIAGQAGPQLFACGGAMLADRAFFLA CHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCEEECCCHHHHCCEEEEE IGGFDESYFAYFEDVDFGWRAWLLGYQIRFNPSALVYHRQHATANTMGGHQIRALLERNA ECCCCCHHHHHHHCCCCCCEEEHEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHH LRTIIKHYADEQLWRILPAAILLIIQRSLLDGSGGFDRKEFDLRLRKQGDQTSTMQVPKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH MLSYIAALGDVLDGWDSLWAERERLQTLRQRSDAELFNLFEQPFGLIDLDVRLHMQQQTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEHHHHHHH VESFKLRELMPNPTTNVLIVSIDPLQAALAGPAIRSVQIAKQLSHSCKVVLAAPDQADLA HHHHHHHHHCCCCCCCEEEEEECHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC IPNVQTIAFPSNDGRSLGELALNAEVIIVQGYSLQKYPQLLNAERILVVDLYDPFHFEAL CCCEEEEEECCCCCCCHHHHHCCCEEEEEECCCHHHHHHHHCCCEEEEEEECCCCCHHHH ELAERRGLSLERALELNDASVAALTQQLALGDFFICASERQRDLWLGALTVSKRLTPEHY HHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEHHHHCCCHHHH RNDPTLRKLIDIVPFGLPSEPPQATQPVMRGVIEGIQQNDVIALWGGGIWEWLDPLTIIR CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHH AMAELQQSHPQLKLVFMGGQHPNTQDVGVMQRYSEAVELAKQLGLYAKTVFFNQTWVAYD HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHEECCHHHHHH QRVNYLLEADLGVSAHHNHTETRFAFRTRLLDYLWASLPMIVSAGDSLADLVQQQQLGQV HHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCE VAIEDVQGWVAALTHAADHPSDRQQRQAQFANIQQAYTWEQACAPLVEFCRQPQYAADKR EEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RNVKAQGQQSGQTSMRYRMDELDRAVAEKNEHIAQLEQHIKALENGKVMRLLKWVNRLRK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]