| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yuxL [H]
Identifier: 159899194
GI number: 159899194
Start: 3429561
End: 3431936
Strand: Direct
Name: yuxL [H]
Synonym: Haur_2675
Alternate gene names: 159899194
Gene position: 3429561-3431936 (Clockwise)
Preceding gene: 159899193
Following gene: 159899197
Centisome position: 54.04
GC content: 50.34
Gene sequence:
>2376_bases ATGCGACGACGCATCAGCTTACTGCTGGCTTTGTTGGCGATCTTGTTTACGACAATGCCTGCCTCGGCAGAAATTGTCAA TGTCCCTTACTTTGAAGAACCGGAATTGCTGCTTGCTGAAGATGAGTTGCTCAAACTCGCCCAACTGCAAGACAACACCT ACCCCAGTGTTGGCACCAAAATCAGCCCCGATGACACGACGGTGGTCATTGGCAACTATCGTTATAGCGACACTGGTTCA GCTTTCTTGAATGTTGTTGATGGCTCGATTGTGCCAATTCAGCCATTACAACTCCCCGAAGATAGCGATTTCTTCCCTTT GGCAGCCACCGAAATGGTTTGGCTTGATAATGACAACATTGGTCAAGTCTTATACGACCTGTTTATGGGTGGGATGGTGC TGTCCATTAATCGCTACAGTGGCCAAATTAGCTTGTATCCAGTTAATTTGCCATTCTTACCGTTATCGATTGCGCCCAAT GGCTCGCGCTTGTTGGTGGTCACCTTCGAAGCATCCGAACTTGAAGCAATGCGCCAATCGCCCGATTCGGTGAAGTTGCC ATTCAACATCGAAGCCCCAAAAACCACCATGGAACGCACCATGCCCAAGGATCGGATTGCCTATTACAGTCATACCGATT CACGCCGCCACATGAGCGAAGAAACCCTTGATTTGGCAATCTTCGATCTAACGACTGGCGCATTAACGCCACTCTACAGC GTGCCTGATCATACCTTGCTCTACGATTATGCATGGTCAAAAGATGGCTCAAAATTCGCTTTGATTCGCGATACGGTGAT TTTGGGCGAAGGTTTTGGTGAAAAGCGCTTGGTTGACGTGATGACCCAAGATGCACTTGGCGGTCTTTCACCCAAGGATA ACCCACTCTTCACCGAAAATGTGCTCGATATCTTCGATCTGACGACTGGCAACTTCCAGCCAGAAGCATGGCGAGCGGTT GATGGCGATGGTCGCGTTGTTCGCGACATCGAATGGAGCACCGACGGCCAACGCTACATCGTGCGCTTGGAACGTCCAGC TCAAATCGCTGGTCGCCCACACCCAACCTATATCTTCCCAGATATGGCCAGCTATCAATTCCGTAGCGTCGATGGCACGT TGCAACGCGAATTGTATGCACCTGAATTGCAAACCCCTGAAGCTTCAGGCTTCTTCTATCTCTCACCAGATGAAGTCTTG TTCATCACTGCCAATGGCACCAACCAAGCCTTGTACTACTTCAACCAAGGCTCAGGCGAGTTCCGCAAAGTGTCGAACAT GGATGGCACCTATTTTGGTGTAACCACCACGAATATGAGCCGTCAGTTGATCTTCAGCTACATGTCGTTCAGCCAGCCAG CCGATATTTATCGTTTGAACTGGGATGGCCAAGCGCTCAGTCGCTTGACCTGGGCCAACGCCGAGCTTGAAAAAATTAAT AATGTTCGAGTTGATAGCGTTTCGTTTACCGTCAGCAGTGGCGCACAACGCAATGGCTTCTTAATTCAACCTGCTGGCGC TGAGTTCCCACCAAAAGATGTGCCAATCGTGATGTGGCAAGAAGGTGGACCACGCGCTACAATGACCCAATTCTTCGCGA CCAACACTGAAAATCCCTACAACCTGTTGCCAAACTTTGGCATCGCGGTGTTGTATGTGCCACTGCCTGGTCGCTTGGGC TTCGGGCCAGAATTCTTGAACGCCTTGGCTGATAATGACAACTTCGGCAAGATCGATATCGACGAAGGTGCCGAAATTAT TGGCCAAGCAATTTCACGCGGTTGGACCTCACAAAATAAGGTTGGGGTAACTGGCTGTTCATACGGCGGCTATTTCAGCG CCCAAAGTATCACCCGCCACCCAACTCGCTACGCTGCTGCCAACCCACAATGCACCTTGCTCAACAACGCCAATGAATTC CACTTTGGCTTGGGGCCATTAATTGCCTACCTCGAAGGTGGCACACCAATGGATAAGCCCGCTGAATATGCCGCTGATTC GCCATTGAATCGCGCTGATCGCGTGCGCACTCCAACCCTGTTGTTCCATGGCGAATACGACTTCTTGCCAGTCAAGTATG CCGTTGACTTCCATGACCAAATCGAAATTCAAAAGCACCGCGTCAAGTTGGTGACCTATGAACTCGAAGGCCATGGTTTG AGCGACCCTGCCAACCAATATCGCGCTGCCCAAGAGCAAATCTTGTGGTTCCGCCAATATTTGAGCGGTAGCCCAAGTGT CGCTGCCGAGCCAGTCGTGACCGATGCCGCAACCATGACAGTGCCTGAAACTACTGATGTAATCGTGTTTACGGAAACCG CTACGTTTGCAGCACCAAGCTTGCAATTCGGCAAGAATCTGATTACTGCTGAATAA
Upstream 100 bases:
>100_bases CGTTTTTTAGCAGCAAATCTGCTAAAGTAGAGCCGAGTTGGAAATGTTCGCGTGTTGGGCTTTGTGTGGAAGAGCTTTGC TCTAGGAGGAAACAAGCGTT
Downstream 100 bases:
>100_bases CTACGTTCGGAATGCAACAGGCGGGGCAATAGTTGCTCCGCCTGTTTTTATTTAAGCCAAGTATCCCGACTGTAGCTCGC GTTCGATCATCGCCAACAAC
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MRRRISLLLALLAILFTTMPASAEIVNVPYFEEPELLLAEDELLKLAQLQDNTYPSVGTKISPDDTTVVIGNYRYSDTGS AFLNVVDGSIVPIQPLQLPEDSDFFPLAATEMVWLDNDNIGQVLYDLFMGGMVLSINRYSGQISLYPVNLPFLPLSIAPN GSRLLVVTFEASELEAMRQSPDSVKLPFNIEAPKTTMERTMPKDRIAYYSHTDSRRHMSEETLDLAIFDLTTGALTPLYS VPDHTLLYDYAWSKDGSKFALIRDTVILGEGFGEKRLVDVMTQDALGGLSPKDNPLFTENVLDIFDLTTGNFQPEAWRAV DGDGRVVRDIEWSTDGQRYIVRLERPAQIAGRPHPTYIFPDMASYQFRSVDGTLQRELYAPELQTPEASGFFYLSPDEVL FITANGTNQALYYFNQGSGEFRKVSNMDGTYFGVTTTNMSRQLIFSYMSFSQPADIYRLNWDGQALSRLTWANAELEKIN NVRVDSVSFTVSSGAQRNGFLIQPAGAEFPPKDVPIVMWQEGGPRATMTQFFATNTENPYNLLPNFGIAVLYVPLPGRLG FGPEFLNALADNDNFGKIDIDEGAEIIGQAISRGWTSQNKVGVTGCSYGGYFSAQSITRHPTRYAAANPQCTLLNNANEF HFGLGPLIAYLEGGTPMDKPAEYAADSPLNRADRVRTPTLLFHGEYDFLPVKYAVDFHDQIEIQKHRVKLVTYELEGHGL SDPANQYRAAQEQILWFRQYLSGSPSVAAEPVVTDAATMTVPETTDVIVFTETATFAAPSLQFGKNLITAE
Sequences:
>Translated_791_residues MRRRISLLLALLAILFTTMPASAEIVNVPYFEEPELLLAEDELLKLAQLQDNTYPSVGTKISPDDTTVVIGNYRYSDTGS AFLNVVDGSIVPIQPLQLPEDSDFFPLAATEMVWLDNDNIGQVLYDLFMGGMVLSINRYSGQISLYPVNLPFLPLSIAPN GSRLLVVTFEASELEAMRQSPDSVKLPFNIEAPKTTMERTMPKDRIAYYSHTDSRRHMSEETLDLAIFDLTTGALTPLYS VPDHTLLYDYAWSKDGSKFALIRDTVILGEGFGEKRLVDVMTQDALGGLSPKDNPLFTENVLDIFDLTTGNFQPEAWRAV DGDGRVVRDIEWSTDGQRYIVRLERPAQIAGRPHPTYIFPDMASYQFRSVDGTLQRELYAPELQTPEASGFFYLSPDEVL FITANGTNQALYYFNQGSGEFRKVSNMDGTYFGVTTTNMSRQLIFSYMSFSQPADIYRLNWDGQALSRLTWANAELEKIN NVRVDSVSFTVSSGAQRNGFLIQPAGAEFPPKDVPIVMWQEGGPRATMTQFFATNTENPYNLLPNFGIAVLYVPLPGRLG FGPEFLNALADNDNFGKIDIDEGAEIIGQAISRGWTSQNKVGVTGCSYGGYFSAQSITRHPTRYAAANPQCTLLNNANEF HFGLGPLIAYLEGGTPMDKPAEYAADSPLNRADRVRTPTLLFHGEYDFLPVKYAVDFHDQIEIQKHRVKLVTYELEGHGL SDPANQYRAAQEQILWFRQYLSGSPSVAAEPVVTDAATMTVPETTDVIVFTETATFAAPSLQFGKNLITAE >Mature_791_residues MRRRISLLLALLAILFTTMPASAEIVNVPYFEEPELLLAEDELLKLAQLQDNTYPSVGTKISPDDTTVVIGNYRYSDTGS AFLNVVDGSIVPIQPLQLPEDSDFFPLAATEMVWLDNDNIGQVLYDLFMGGMVLSINRYSGQISLYPVNLPFLPLSIAPN GSRLLVVTFEASELEAMRQSPDSVKLPFNIEAPKTTMERTMPKDRIAYYSHTDSRRHMSEETLDLAIFDLTTGALTPLYS VPDHTLLYDYAWSKDGSKFALIRDTVILGEGFGEKRLVDVMTQDALGGLSPKDNPLFTENVLDIFDLTTGNFQPEAWRAV DGDGRVVRDIEWSTDGQRYIVRLERPAQIAGRPHPTYIFPDMASYQFRSVDGTLQRELYAPELQTPEASGFFYLSPDEVL FITANGTNQALYYFNQGSGEFRKVSNMDGTYFGVTTTNMSRQLIFSYMSFSQPADIYRLNWDGQALSRLTWANAELEKIN NVRVDSVSFTVSSGAQRNGFLIQPAGAEFPPKDVPIVMWQEGGPRATMTQFFATNTENPYNLLPNFGIAVLYVPLPGRLG FGPEFLNALADNDNFGKIDIDEGAEIIGQAISRGWTSQNKVGVTGCSYGGYFSAQSITRHPTRYAAANPQCTLLNNANEF HFGLGPLIAYLEGGTPMDKPAEYAADSPLNRADRVRTPTLLFHGEYDFLPVKYAVDFHDQIEIQKHRVKLVTYELEGHGL SDPANQYRAAQEQILWFRQYLSGSPSVAAEPVVTDAATMTVPETTDVIVFTETATFAAPSLQFGKNLITAE
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=260, Percent_Identity=26.1538461538462, Blast_Score=76, Evalue=2e-13, Organism=Caenorhabditis elegans, GI25149159, Length=259, Percent_Identity=25.8687258687259, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 87958; Mature: 87958
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRISLLLALLAILFTTMPASAEIVNVPYFEEPELLLAEDELLKLAQLQDNTYPSVGTK CCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCE ISPDDTTVVIGNYRYSDTGSAFLNVVDGSIVPIQPLQLPEDSDFFPLAATEMVWLDNDNI ECCCCCEEEEECEEECCCCCEEEEEECCCEEEECCCCCCCCCCEECEEEEEEEEECCCCH GQVLYDLFMGGMVLSINRYSGQISLYPVNLPFLPLSIAPNGSRLLVVTFEASELEAMRQS HHHHHHHHHCCEEEEEEECCCEEEEEEECCCEEEEEECCCCCEEEEEEECHHHHHHHHCC PDSVKLPFNIEAPKTTMERTMPKDRIAYYSHTDSRRHMSEETLDLAIFDLTTGALTPLYS CCCEEEEEECCCCCHHHHHCCCHHHEEEEECCCHHHHCCCHHHEEEEEEECCCCCCCEEC VPDHTLLYDYAWSKDGSKFALIRDTVILGEGFGEKRLVDVMTQDALGGLSPKDNPLFTEN CCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH VLDIFDLTTGNFQPEAWRAVDGDGRVVRDIEWSTDGQRYIVRLERPAQIAGRPHPTYIFP HHHHEECCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEECCHHHCCCCCCCEECC DMASYQFRSVDGTLQRELYAPELQTPEASGFFYLSPDEVLFITANGTNQALYYFNQGSGE CCCCCEEECCCCHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCCC FRKVSNMDGTYFGVTTTNMSRQLIFSYMSFSQPADIYRLNWDGQALSRLTWANAELEKIN EEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHEEECCCHHHHCC NVRVDSVSFTVSSGAQRNGFLIQPAGAEFPPKDVPIVMWQEGGPRATMTQFFATNTENPY CEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCHHHHEEECCCCCCC NLLPNFGIAVLYVPLPGRLGFGPEFLNALADNDNFGKIDIDEGAEIIGQAISRGWTSQNK CCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHHHHCCCCCCCC VGVTGCSYGGYFSAQSITRHPTRYAAANPQCTLLNNANEFHFGLGPLIAYLEGGTPMDKP EEEEECCCCCEECCCCHHCCCCEEECCCCCEEEECCCCCEEECHHHHHHEECCCCCCCCC AEYAADSPLNRADRVRTPTLLFHGEYDFLPVKYAVDFHDQIEIQKHRVKLVTYELEGHGL HHHCCCCCCCHHHHCCCCEEEEECCCCEEEEEEEECCCCCEEEEEEEEEEEEEEECCCCC SDPANQYRAAQEQILWFRQYLSGSPSVAAEPVVTDAATMTVPETTDVIVFTETATFAAPS CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEECCCCCEEEEEECCCCCCCCC LQFGKNLITAE HHHCCEEECCC >Mature Secondary Structure MRRRISLLLALLAILFTTMPASAEIVNVPYFEEPELLLAEDELLKLAQLQDNTYPSVGTK CCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCE ISPDDTTVVIGNYRYSDTGSAFLNVVDGSIVPIQPLQLPEDSDFFPLAATEMVWLDNDNI ECCCCCEEEEECEEECCCCCEEEEEECCCEEEECCCCCCCCCCEECEEEEEEEEECCCCH GQVLYDLFMGGMVLSINRYSGQISLYPVNLPFLPLSIAPNGSRLLVVTFEASELEAMRQS HHHHHHHHHCCEEEEEEECCCEEEEEEECCCEEEEEECCCCCEEEEEEECHHHHHHHHCC PDSVKLPFNIEAPKTTMERTMPKDRIAYYSHTDSRRHMSEETLDLAIFDLTTGALTPLYS CCCEEEEEECCCCCHHHHHCCCHHHEEEEECCCHHHHCCCHHHEEEEEEECCCCCCCEEC VPDHTLLYDYAWSKDGSKFALIRDTVILGEGFGEKRLVDVMTQDALGGLSPKDNPLFTEN CCCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH VLDIFDLTTGNFQPEAWRAVDGDGRVVRDIEWSTDGQRYIVRLERPAQIAGRPHPTYIFP HHHHEECCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEECCHHHCCCCCCCEECC DMASYQFRSVDGTLQRELYAPELQTPEASGFFYLSPDEVLFITANGTNQALYYFNQGSGE CCCCCEEECCCCHHHHHCCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCCC FRKVSNMDGTYFGVTTTNMSRQLIFSYMSFSQPADIYRLNWDGQALSRLTWANAELEKIN EEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHEEECCCHHHHCC NVRVDSVSFTVSSGAQRNGFLIQPAGAEFPPKDVPIVMWQEGGPRATMTQFFATNTENPY CEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCHHHHEEECCCCCCC NLLPNFGIAVLYVPLPGRLGFGPEFLNALADNDNFGKIDIDEGAEIIGQAISRGWTSQNK CCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHHHHCCCCCCCC VGVTGCSYGGYFSAQSITRHPTRYAAANPQCTLLNNANEFHFGLGPLIAYLEGGTPMDKP EEEEECCCCCEECCCCHHCCCCEEECCCCCEEEECCCCCEEECHHHHHHEECCCCCCCCC AEYAADSPLNRADRVRTPTLLFHGEYDFLPVKYAVDFHDQIEIQKHRVKLVTYELEGHGL HHHCCCCCCCHHHHCCCCEEEEECCCCEEEEEEEECCCCCEEEEEEEEEEEEEEECCCCC SDPANQYRAAQEQILWFRQYLSGSPSVAAEPVVTDAATMTVPETTDVIVFTETATFAAPS CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEECCCCCEEEEEECCCCCCCCC LQFGKNLITAE HHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]