Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899170

Identifier: 159899170

GI number: 159899170

Start: 3401803

End: 3402489

Strand: Direct

Name: 159899170

Synonym: Haur_2651

Alternate gene names: NA

Gene position: 3401803-3402489 (Clockwise)

Preceding gene: 159899169

Following gene: 159899171

Centisome position: 53.6

GC content: 50.51

Gene sequence:

>687_bases
ATGCGCTGGTGGAAAAAACTTGGCTTATTGGTGGTAGCAATGGCCTTGGTGGCCTGTGGCAACGCCGATGTCGATGCAGC
AAAAGTGGCGAGCGAAGGTGCAACCGCCTTTGAAAGCGTCAACAATTTTCACTTTAAACTAACGGTCAGCGAAGGCGAAG
CCGCGCCTTTGGGCGATATTATCATCATCGATGCTGATGGCGATAGCATTCGCCCTGATAAAATTCAAGCTAAAATCAAG
GCCAAATTGGCAGGTGCACCAATCGCCGTCAATATCAACGGCATCATCATCGGAGCCGATGCCTGGATCACGCCGAATCC
GTTCAACCCAACCGCCTTCGAAAAGTTGGAAGATACTGGTGGGCTTGAAACATTTTCGCCAGCCAAGGGTATTAGTGATG
TGCTGCGCGGCCTGAAAACCCCAACGTTTGTCGAAGAGGCAGAAATCGACGGCACGGCAACCTATCATATCAGCGGCGAA
GTTGATGCTCAAAGCGTCTCAGCGCTGACTGGTGGAGTCGCCGAGGCTGGTACAATTAAGCTCGATCTGTGGATTGGCAA
AGACGACAAATTATTACGTCAATTGGTTGCGGTTGGCCGCTTGGTCAGCACCGAAAAAGAAACCATCAAGCGCACCTTGA
TTGTTTCGAAATTCAACCAAACGCTCACAATCGAGCCACCACAATAG

Upstream 100 bases:

>100_bases
TTTGGAGGGTCAAGGGCGTTTGCAGCGCGAACAACGGGCTAGACAGATTATCTTTCTTGATCAACACTAACGCCGATTCG
CAACGTTTTTTGGAGGGTGT

Downstream 100 bases:

>100_bases
TTTTCCGTAGGCTGGTTCGTTATGTCGAACCACGATGCTATGGATAGACCAAACACTGTAATCGCGAGGTATCCAAACAT
GCTTGATCAACCATTAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRWWKKLGLLVVAMALVACGNADVDAAKVASEGATAFESVNNFHFKLTVSEGEAAPLGDIIIIDADGDSIRPDKIQAKIK
AKLAGAPIAVNINGIIIGADAWITPNPFNPTAFEKLEDTGGLETFSPAKGISDVLRGLKTPTFVEEAEIDGTATYHISGE
VDAQSVSALTGGVAEAGTIKLDLWIGKDDKLLRQLVAVGRLVSTEKETIKRTLIVSKFNQTLTIEPPQ

Sequences:

>Translated_228_residues
MRWWKKLGLLVVAMALVACGNADVDAAKVASEGATAFESVNNFHFKLTVSEGEAAPLGDIIIIDADGDSIRPDKIQAKIK
AKLAGAPIAVNINGIIIGADAWITPNPFNPTAFEKLEDTGGLETFSPAKGISDVLRGLKTPTFVEEAEIDGTATYHISGE
VDAQSVSALTGGVAEAGTIKLDLWIGKDDKLLRQLVAVGRLVSTEKETIKRTLIVSKFNQTLTIEPPQ
>Mature_228_residues
MRWWKKLGLLVVAMALVACGNADVDAAKVASEGATAFESVNNFHFKLTVSEGEAAPLGDIIIIDADGDSIRPDKIQAKIK
AKLAGAPIAVNINGIIIGADAWITPNPFNPTAFEKLEDTGGLETFSPAKGISDVLRGLKTPTFVEEAEIDGTATYHISGE
VDAQSVSALTGGVAEAGTIKLDLWIGKDDKLLRQLVAVGRLVSTEKETIKRTLIVSKFNQTLTIEPPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24180; Mature: 24180

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWWKKLGLLVVAMALVACGNADVDAAKVASEGATAFESVNNFHFKLTVSEGEAAPLGDI
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHCCCCEEEEEEECCCCCCCCCCE
IIIDADGDSIRPDKIQAKIKAKLAGAPIAVNINGIIIGADAWITPNPFNPTAFEKLEDTG
EEEECCCCCCCCHHHHHEEEEEECCCCEEEEECEEEECCCCEECCCCCCCHHHHHHHHCC
GLETFSPAKGISDVLRGLKTPTFVEEAEIDGTATYHISGEVDAQSVSALTGGVAEAGTIK
CCCCCCCCCCHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEE
LDLWIGKDDKLLRQLVAVGRLVSTEKETIKRTLIVSKFNQTLTIEPPQ
EEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCEEEECCCC
>Mature Secondary Structure
MRWWKKLGLLVVAMALVACGNADVDAAKVASEGATAFESVNNFHFKLTVSEGEAAPLGDI
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHCCCCEEEEEEECCCCCCCCCCE
IIIDADGDSIRPDKIQAKIKAKLAGAPIAVNINGIIIGADAWITPNPFNPTAFEKLEDTG
EEEECCCCCCCCHHHHHEEEEEECCCCEEEEECEEEECCCCEECCCCCCCHHHHHHHHCC
GLETFSPAKGISDVLRGLKTPTFVEEAEIDGTATYHISGEVDAQSVSALTGGVAEAGTIK
CCCCCCCCCCHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEE
LDLWIGKDDKLLRQLVAVGRLVSTEKETIKRTLIVSKFNQTLTIEPPQ
EEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA