| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899164
Identifier: 159899164
GI number: 159899164
Start: 3393463
End: 3394791
Strand: Direct
Name: 159899164
Synonym: Haur_2645
Alternate gene names: NA
Gene position: 3393463-3394791 (Clockwise)
Preceding gene: 159899163
Following gene: 159899166
Centisome position: 53.47
GC content: 49.06
Gene sequence:
>1329_bases ATGGAATATGGGCATTGTGAGGGGATGGCTGTACTCAGTATCCTATTTCAGCGTGGGATCTTGAATCCTGCTGATTTCGG AGCAGCCCGCACCCGCGACCTTGTGTTAGAAGGCAATCAAAAGCTCCAACGCGAGATTGCCTATTGGTATGCAACCATGA TTCCTAATCCTGGGCGGGCGGCTCGGATTATCGCCCCACCCCGCGATCTAGTAGCCGTCTTGCGAACAGCGTTTGCCAAT ACCCAAACTGCCTTTTATACCTTACGCTTCAGCAAATTGGATCGCAGCGGTGGCCACTCGGTCGTGCCGATGGGGCTGCG CGATATTTCAGCAAACGAAGTGGCAATCCAAGTCTACGATAGTAATAGCCCCACGATCGCCCGTGAGTTGATCGTCAATA CTGCAACCAATACATGGTCATACTCGCCTGCCCTAGACCCCAACCAAACCAGCGATGACTACAACGGGACGGCGCAAAGC CTCACGTTAGGCCTTGCACCAATCGAGCCACGCCAAGGCCAACAAACCTGCGCACTATGCGCCGAATCAGATCCGTTACT TAACACCACAGCTTCATCGGACAATCCGATCATTTTACCACCAACAACGACAAATGATGGAATGGGAAATGTGAATCAAG GAAATGCGGATATTTCCAATCCCGAATTCATCACGCCATGGATGGATTTGGCACCGTCGAATCCGCTGGTTGATTCATGG TCAAGCCCTGTCTTAAAGTATTTTGTTTTACAGCCAAATGCTGATGGTCACTTTGTACTTTCAGCTCCAAGTGAAAATCA AACTAATATTCCCGTGAGTATCAGATCGATTGGGCGTGGCTATACCTTCGAGGTGGAAACGACCGTTGCAAGTGGCTTCC CAAGCGAAGTCATTGTTGGCAGTCAAGGCAATGTTATTACCTTTACCACCCAAACAACCACCTCGCCCACGATGTATCTT GGCTTTGAAACTCCCACCGACGACTTCGATTTCTATATCGAGGACTTTGACCTCAGCGCCGATGATTCCTTCCGACTTGA GGTTGATGCCTCAAACAAACTCGTTGGGCTACGTGCCATCACCGCTATCCCCGACGAAAGTGTTACCTTTAGTCTGTCGA TGGAGCGGATTGATGATCAAGGGATTGAAATTTTCAACTCTCCCGACGAAGGCATTAGTTTGTTTGAAAACGAGATTTTG CTGATCGATTTCAGTCAATGGTCGGGCAATGGCGGAACTCTACGTATGGGCTACGACGATAATCTCAATGGGTTGATTGA TGCCAATGAAGCATTTGTAATTGAGGATGTCGGCGATACCATCCCTTAA
Upstream 100 bases:
>100_bases GCGTCGCCTCTATGGATCATAAGTATGTGCCACCATCCAAAATGATGTCTGTACCCTCACCCCGCCTGCCGAACGCTGGA TGGAGTGGGTCAATAGCACG
Downstream 100 bases:
>100_bases TTAATTCGCGTTAACAGCAAACCAACCGCTCCACATGGATTATGCATGTGGAGCGGTGTAGTGCCTCTGATGATCATCGA TGAATAGCAGAAACCTTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MEYGHCEGMAVLSILFQRGILNPADFGAARTRDLVLEGNQKLQREIAYWYATMIPNPGRAARIIAPPRDLVAVLRTAFAN TQTAFYTLRFSKLDRSGGHSVVPMGLRDISANEVAIQVYDSNSPTIARELIVNTATNTWSYSPALDPNQTSDDYNGTAQS LTLGLAPIEPRQGQQTCALCAESDPLLNTTASSDNPIILPPTTTNDGMGNVNQGNADISNPEFITPWMDLAPSNPLVDSW SSPVLKYFVLQPNADGHFVLSAPSENQTNIPVSIRSIGRGYTFEVETTVASGFPSEVIVGSQGNVITFTTQTTTSPTMYL GFETPTDDFDFYIEDFDLSADDSFRLEVDASNKLVGLRAITAIPDESVTFSLSMERIDDQGIEIFNSPDEGISLFENEIL LIDFSQWSGNGGTLRMGYDDNLNGLIDANEAFVIEDVGDTIP
Sequences:
>Translated_442_residues MEYGHCEGMAVLSILFQRGILNPADFGAARTRDLVLEGNQKLQREIAYWYATMIPNPGRAARIIAPPRDLVAVLRTAFAN TQTAFYTLRFSKLDRSGGHSVVPMGLRDISANEVAIQVYDSNSPTIARELIVNTATNTWSYSPALDPNQTSDDYNGTAQS LTLGLAPIEPRQGQQTCALCAESDPLLNTTASSDNPIILPPTTTNDGMGNVNQGNADISNPEFITPWMDLAPSNPLVDSW SSPVLKYFVLQPNADGHFVLSAPSENQTNIPVSIRSIGRGYTFEVETTVASGFPSEVIVGSQGNVITFTTQTTTSPTMYL GFETPTDDFDFYIEDFDLSADDSFRLEVDASNKLVGLRAITAIPDESVTFSLSMERIDDQGIEIFNSPDEGISLFENEIL LIDFSQWSGNGGTLRMGYDDNLNGLIDANEAFVIEDVGDTIP >Mature_442_residues MEYGHCEGMAVLSILFQRGILNPADFGAARTRDLVLEGNQKLQREIAYWYATMIPNPGRAARIIAPPRDLVAVLRTAFAN TQTAFYTLRFSKLDRSGGHSVVPMGLRDISANEVAIQVYDSNSPTIARELIVNTATNTWSYSPALDPNQTSDDYNGTAQS LTLGLAPIEPRQGQQTCALCAESDPLLNTTASSDNPIILPPTTTNDGMGNVNQGNADISNPEFITPWMDLAPSNPLVDSW SSPVLKYFVLQPNADGHFVLSAPSENQTNIPVSIRSIGRGYTFEVETTVASGFPSEVIVGSQGNVITFTTQTTTSPTMYL GFETPTDDFDFYIEDFDLSADDSFRLEVDASNKLVGLRAITAIPDESVTFSLSMERIDDQGIEIFNSPDEGISLFENEIL LIDFSQWSGNGGTLRMGYDDNLNGLIDANEAFVIEDVGDTIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48130; Mature: 48130
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYGHCEGMAVLSILFQRGILNPADFGAARTRDLVLEGNQKLQREIAYWYATMIPNPGRA CCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCEEEEEECCHHHHHHHHEEEEEECCCCCCE ARIIAPPRDLVAVLRTAFANTQTAFYTLRFSKLDRSGGHSVVPMGLRDISANEVAIQVYD EEEECCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEECCEECCCCEEEEEEEE SNSPTIARELIVNTATNTWSYSPALDPNQTSDDYNGTAQSLTLGLAPIEPRQGQQTCALC CCCCCEEEEHEEECCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEE AESDPLLNTTASSDNPIILPPTTTNDGMGNVNQGNADISNPEFITPWMDLAPSNPLVDSW CCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEECHHHHCCCCCCCCCCC SSPVLKYFVLQPNADGHFVLSAPSENQTNIPVSIRSIGRGYTFEVETTVASGFPSEVIVG CCCEEEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCEEEEC SQGNVITFTTQTTTSPTMYLGFETPTDDFDFYIEDFDLSADDSFRLEVDASNKLVGLRAI CCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEEE TAIPDESVTFSLSMERIDDQGIEIFNSPDEGISLFENEILLIDFSQWSGNGGTLRMGYDD EECCCCCEEEEEEEECCCCCCCEEECCCCCCHHEECCCEEEEEECCCCCCCCEEEECCCC NLNGLIDANEAFVIEDVGDTIP CCCCEEECCCEEEEECCCCCCC >Mature Secondary Structure MEYGHCEGMAVLSILFQRGILNPADFGAARTRDLVLEGNQKLQREIAYWYATMIPNPGRA CCCCCCCHHHHHHHHHHHCCCCCHHCCCCCCEEEEEECCHHHHHHHHEEEEEECCCCCCE ARIIAPPRDLVAVLRTAFANTQTAFYTLRFSKLDRSGGHSVVPMGLRDISANEVAIQVYD EEEECCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEECCEECCCCEEEEEEEE SNSPTIARELIVNTATNTWSYSPALDPNQTSDDYNGTAQSLTLGLAPIEPRQGQQTCALC CCCCCEEEEHEEECCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEE AESDPLLNTTASSDNPIILPPTTTNDGMGNVNQGNADISNPEFITPWMDLAPSNPLVDSW CCCCCCEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEECHHHHCCCCCCCCCCC SSPVLKYFVLQPNADGHFVLSAPSENQTNIPVSIRSIGRGYTFEVETTVASGFPSEVIVG CCCEEEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCEEEEC SQGNVITFTTQTTTSPTMYLGFETPTDDFDFYIEDFDLSADDSFRLEVDASNKLVGLRAI CCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEEE TAIPDESVTFSLSMERIDDQGIEIFNSPDEGISLFENEILLIDFSQWSGNGGTLRMGYDD EECCCCCEEEEEEEECCCCCCCEEECCCCCCHHEECCCEEEEEECCCCCCCCEEEECCCC NLNGLIDANEAFVIEDVGDTIP CCCCEEECCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA