Click here to switch to the map view.

The map label for this gene is gbpA [H]

Identifier: 159899166

GI number: 159899166

Start: 3397816

End: 3398739

Strand: Direct

Name: gbpA [H]

Synonym: Haur_2647

Alternate gene names: 159899166

Gene position: 3397816-3398739 (Clockwise)

Preceding gene: 159899164

Following gene: 159899168

Centisome position: 53.54

GC content: 53.35

Gene sequence:

>924_bases
ATGGTACAACGCCGTATCTTTAGTTTAACCGTCGGTTGTTGGTCGGCATTATTGCTGGTTTTGGCAATTAGCAGCCAAGT
TAACGCTCACGGAGCGATGCAAACGCCAGTCAGTCGGACATATGCATGTTTTCTTGAAGGCCCAGAAACTCCTGATACCG
CCGCTTGTCGCGCAGCAATTGATATCGGAGGCACGCAGCCACTCTACGATTGGAATGAAGTTAATATTGGTAATGCTGCG
GGTCAGCATCGTTCGTTAATTCCCGATGGCAAATTGTGTAGTGCAGGCCGCGCCAAGTATGCCGGCTTTGATCTAGCTCG
CGCCGATTGGCCCGCCACACCATTAACATCTGGCAGTTCGATGAGTTTTCTCTATCGGGCGACCGCACCGCACCCTGGTT
CGTTCGAGTTTTATATTACTCGCGACGGTTATAGCCCGACCCAAGCCCTCAAATGGTCGGATCTTGAGGCCACGCCCTTT
TTGAAGGTCACCAATCCGCAATTAGTTAATGGCTCATATGTGATCAATGCCCGCATTCCTAACAACAAAACTGGCCGCCA
TTTGATCTATTCAATTTGGCAGCGCTCGGATAGTGCCGAAGCCTTTTACACCTGCTCGGATGTGACCTTTGGCGGCACCA
ACCCAACCAGCGTGCCAACCGCCACACCACGGCCAAGCGCAGTGCCAACCGCAACCGTGCCACCAACCGGCACACCAATT
GCCACCGCCACACCGCGCCCAACCAACGTACCAACTGCCACGCCAACCAATCCAACTACTCAAGCTTGGCAACCCTATAC
CAGCTATGCCACTGGCGCAGGCGTAGCTTATGCAGGCAACACCTACATCTGTCGCCAAGGCCATACCTCGCTGCCAGGTT
GGGAACCCTCAGCAGTGCCAGCGTTATGGCAATTGATCAATTAA

Upstream 100 bases:

>100_bases
AGCCTTTACGCTTTTGTCCGCCAGCGTTGGTTGTGTTGAACTGGAAAACCCATAACGCGGAGCCACGCCGCTCCGAACCT
AGTACGAGGGGGACAATCCA

Downstream 100 bases:

>100_bases
ATGAATCAAAGCCCCGCAGATCTGGCTGAAGCTGCGGGGCTTTAAATTTAGTCAGCTAACGGCCATAATACCACTTGGTT
GGTCATAATCAGCGGCATCA

Product: chitin-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MVQRRIFSLTVGCWSALLLVLAISSQVNAHGAMQTPVSRTYACFLEGPETPDTAACRAAIDIGGTQPLYDWNEVNIGNAA
GQHRSLIPDGKLCSAGRAKYAGFDLARADWPATPLTSGSSMSFLYRATAPHPGSFEFYITRDGYSPTQALKWSDLEATPF
LKVTNPQLVNGSYVINARIPNNKTGRHLIYSIWQRSDSAEAFYTCSDVTFGGTNPTSVPTATPRPSAVPTATVPPTGTPI
ATATPRPTNVPTATPTNPTTQAWQPYTSYATGAGVAYAGNTYICRQGHTSLPGWEPSAVPALWQLIN

Sequences:

>Translated_307_residues
MVQRRIFSLTVGCWSALLLVLAISSQVNAHGAMQTPVSRTYACFLEGPETPDTAACRAAIDIGGTQPLYDWNEVNIGNAA
GQHRSLIPDGKLCSAGRAKYAGFDLARADWPATPLTSGSSMSFLYRATAPHPGSFEFYITRDGYSPTQALKWSDLEATPF
LKVTNPQLVNGSYVINARIPNNKTGRHLIYSIWQRSDSAEAFYTCSDVTFGGTNPTSVPTATPRPSAVPTATVPPTGTPI
ATATPRPTNVPTATPTNPTTQAWQPYTSYATGAGVAYAGNTYICRQGHTSLPGWEPSAVPALWQLIN
>Mature_307_residues
MVQRRIFSLTVGCWSALLLVLAISSQVNAHGAMQTPVSRTYACFLEGPETPDTAACRAAIDIGGTQPLYDWNEVNIGNAA
GQHRSLIPDGKLCSAGRAKYAGFDLARADWPATPLTSGSSMSFLYRATAPHPGSFEFYITRDGYSPTQALKWSDLEATPF
LKVTNPQLVNGSYVINARIPNNKTGRHLIYSIWQRSDSAEAFYTCSDVTFGGTNPTSVPTATPRPSAVPTATVPPTGTPI
ATATPRPTNVPTATPTNPTTQAWQPYTSYATGAGVAYAGNTYICRQGHTSLPGWEPSAVPALWQLIN

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 32844; Mature: 32844

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQRRIFSLTVGCWSALLLVLAISSQVNAHGAMQTPVSRTYACFLEGPETPDTAACRAAI
CCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHEEEE
DIGGTQPLYDWNEVNIGNAAGQHRSLIPDGKLCSAGRAKYAGFDLARADWPATPLTSGSS
ECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
MSFLYRATAPHPGSFEFYITRDGYSPTQALKWSDLEATPFLKVTNPQLVNGSYVINARIP
EEEEEEECCCCCCCEEEEEEECCCCHHHCEEECCCCCCCEEEECCCEEECCEEEEEEECC
NNKTGRHLIYSIWQRSDSAEAFYTCSDVTFGGTNPTSVPTATPRPSAVPTATVPPTGTPI
CCCCCHHHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
ATATPRPTNVPTATPTNPTTQAWQPYTSYATGAGVAYAGNTYICRQGHTSLPGWEPSAVP
EECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCEEEEECCCCCCCCCCCCHHH
ALWQLIN
HHHHHCC
>Mature Secondary Structure
MVQRRIFSLTVGCWSALLLVLAISSQVNAHGAMQTPVSRTYACFLEGPETPDTAACRAAI
CCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHEEEE
DIGGTQPLYDWNEVNIGNAAGQHRSLIPDGKLCSAGRAKYAGFDLARADWPATPLTSGSS
ECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
MSFLYRATAPHPGSFEFYITRDGYSPTQALKWSDLEATPFLKVTNPQLVNGSYVINARIP
EEEEEEECCCCCCCEEEEEEECCCCHHHCEEECCCCCCCEEEECCCEEECCEEEEEEECC
NNKTGRHLIYSIWQRSDSAEAFYTCSDVTFGGTNPTSVPTATPRPSAVPTATVPPTGTPI
CCCCCHHHHHHHHHCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
ATATPRPTNVPTATPTNPTTQAWQPYTSYATGAGVAYAGNTYICRQGHTSLPGWEPSAVP
EECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCEEEEECCCCCCCCCCCCHHH
ALWQLIN
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]