Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899148

Identifier: 159899148

GI number: 159899148

Start: 3374113

End: 3374700

Strand: Direct

Name: 159899148

Synonym: Haur_2629

Alternate gene names: NA

Gene position: 3374113-3374700 (Clockwise)

Preceding gene: 159899147

Following gene: 159899149

Centisome position: 53.16

GC content: 27.55

Gene sequence:

>588_bases
ATGAATCCCAACAATCCACAAATCTCGAATACTATTAATGGAAGCACTATTAATGGCGGCAACGTCGCAATCGGTAATAA
CGGAAACATCAATCAAACTAATAATAACTATATTACCCACCAAAACAGCAATGAATATATTGAAGTCTTTGGAACGTTAT
CAATCTATCTAAAAAGTGATAAACAATATCAAGATTTCGATCCTTATGTTCCGTTTAGTTGTATGGCTGAAATAACTGAA
GATAGAACAACCAGAACCACAAATTACACATTATTTACTGATTATTTATATTTAGATAATTATCAAAGATCTTATACATC
TGAATTTGATTATTATTATCAATTTCGCAATGATAACAATAAATATCTACGAAGAATTTTTAGAAATATGATTGATGAAT
TAAAGAAAATAGGATTTTACTTTAAAGAAGAAGATGAAAAATTCATATTAGATACATCTATTGGAAATCCTTCATTATCA
GCTTTAAAATCGTTTACAGGATCAGAACACAAGTGTTTCCTTCGTATCTATGATAATTTTATATCAATCGACAAAAAAAA
TACACAAGTATGTACAATGTATCAATAA

Upstream 100 bases:

>100_bases
GTGGTGATTGACAATAATTGTTAAAACCTACCCTTGTAAGGAGGGGGCTAGGGGGTGAGGTCACAAAACGCTACGCTCAC
TAAACCGTTGGAGGCTCCCC

Downstream 100 bases:

>100_bases
ATACTGATAATATCAGTATAAATCAAAAAATCCTTAATGAATGGCTGGCTAGTAAGCCGCGACCTGATAAAGGTGACTTA
ATCGAAATACATTGGCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNPNNPQISNTINGSTINGGNVAIGNNGNINQTNNNYITHQNSNEYIEVFGTLSIYLKSDKQYQDFDPYVPFSCMAEITE
DRTTRTTNYTLFTDYLYLDNYQRSYTSEFDYYYQFRNDNNKYLRRIFRNMIDELKKIGFYFKEEDEKFILDTSIGNPSLS
ALKSFTGSEHKCFLRIYDNFISIDKKNTQVCTMYQ

Sequences:

>Translated_195_residues
MNPNNPQISNTINGSTINGGNVAIGNNGNINQTNNNYITHQNSNEYIEVFGTLSIYLKSDKQYQDFDPYVPFSCMAEITE
DRTTRTTNYTLFTDYLYLDNYQRSYTSEFDYYYQFRNDNNKYLRRIFRNMIDELKKIGFYFKEEDEKFILDTSIGNPSLS
ALKSFTGSEHKCFLRIYDNFISIDKKNTQVCTMYQ
>Mature_195_residues
MNPNNPQISNTINGSTINGGNVAIGNNGNINQTNNNYITHQNSNEYIEVFGTLSIYLKSDKQYQDFDPYVPFSCMAEITE
DRTTRTTNYTLFTDYLYLDNYQRSYTSEFDYYYQFRNDNNKYLRRIFRNMIDELKKIGFYFKEEDEKFILDTSIGNPSLS
ALKSFTGSEHKCFLRIYDNFISIDKKNTQVCTMYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22982; Mature: 22982

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPNNPQISNTINGSTINGGNVAIGNNGNINQTNNNYITHQNSNEYIEVFGTLSIYLKSD
CCCCCCCCCCCCCCCEECCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEECC
KQYQDFDPYVPFSCMAEITEDRTTRTTNYTLFTDYLYLDNYQRSYTSEFDYYYQFRNDNN
CCCCCCCCCCCHHHHHHHHCCCCEEECEEEEEEEEEEECCCCHHHCCCCEEEEEEECCCH
KYLRRIFRNMIDELKKIGFYFKEEDEKFILDTSIGNPSLSALKSFTGSEHKCFLRIYDNF
HHHHHHHHHHHHHHHHHCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEHHH
ISIDKKNTQVCTMYQ
HCCCCCCCEEEEEEC
>Mature Secondary Structure
MNPNNPQISNTINGSTINGGNVAIGNNGNINQTNNNYITHQNSNEYIEVFGTLSIYLKSD
CCCCCCCCCCCCCCCEECCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEECC
KQYQDFDPYVPFSCMAEITEDRTTRTTNYTLFTDYLYLDNYQRSYTSEFDYYYQFRNDNN
CCCCCCCCCCCHHHHHHHHCCCCEEECEEEEEEEEEEECCCCHHHCCCCEEEEEEECCCH
KYLRRIFRNMIDELKKIGFYFKEEDEKFILDTSIGNPSLSALKSFTGSEHKCFLRIYDNF
HHHHHHHHHHHHHHHHHCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEHHH
ISIDKKNTQVCTMYQ
HCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA