| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is accA1 [H]
Identifier: 159899147
GI number: 159899147
Start: 3371691
End: 3373652
Strand: Direct
Name: accA1 [H]
Synonym: Haur_2628
Alternate gene names: 159899147
Gene position: 3371691-3373652 (Clockwise)
Preceding gene: 159899144
Following gene: 159899148
Centisome position: 53.13
GC content: 54.79
Gene sequence:
>1962_bases GTGACCTACTTCGACTCTTTGTTAATTGCCAATCGGGGCGAAATTGCGGTGCGGGTAATTCGGGCTTGTCGCTCATTGGG CATCGAAGCAATCGCGGTTTATTCCGATGCCGACGCACGCGCCTTGCATGTGCGCGAGGCTGATCGCGCGATTCGCATCG GCCCAGCTGCTGCCGCTCAATCGTATTTGAATATCGAAGCAGTGCTAGCCGCTGCCCAACAAACTGGAGCACAGGCGATT CACCCAGGCTATGGCTTTCTCTCAGAAAATGCCAATTTTGCCCGTGCCTGCCAATCAGCAGGCATTGCCTTCATTGGCCC GCCCGCCGAAGCAATCGAGGCCATGGGTTCGAAAAGCGCCGCCAAACGCCTCGCCGAATCGGTGGGCGTGCCAACCGTGC CAGGCTACAACGGCGATGATCAAAGCGAACAACGCTTGTTGGCCGAAGCCGAGCGAATTGGCTTTCCATTGCTGATCAAG GCTTCAGCTGGTGGCGGCGGCAAAGGCATGCGCAGCGTGCATCGGCTTGCTGAATTTTCAGCGGCCTTGGCAGCAGCGCA GCGCGAAGCCCTTGCCGCATTTGGCGATCAGCATGTTTTGCTCGAAAAGCTGATTGAACGCCCACGCCATATTGAGTTTC AAATCCTCGGCGATCAACATGGCACCATGCTGCATCTTGGCGAACGCGAGTGTTCAATTCAACGCCGCCACCAAAAAGTG CTTGAAGAATCGCCCTCAATTGCATTAACTCCAGCATTACGCGCTACGATGGGCGCGGCGGCGGTGCGTTTGGCGCAAGC CGTCAATTATTACAATGCTGGCACTCAAGAGTTTATGCTCGATGCCAATGGCGAGTTTTATTTCCTCGAAATGAATACCC GTTTGCAAGTTGAGCACCCCGTGACCGAGTTGGTGACAGGCTTGGATTTGGTGCAATTGCAAATTGCGATCGCCGCTGGT CAGCGTTTGCCCTTTGCTCAAGCAGATATTCAGCAAACTGGCCATGCGATTGAAGTGCGCTTGTATGCGGAAGATCCCGT GCAAATGTTGCCCTCAATCGGCCAACTCAGCAGCTACACGCCGCCCGAAGGCCCAGGCATTCGACTGGATACTGGGGTCA CAGTTGGCGATCATGTCACGATCAATTATGATCCGATGCTGGCCAAGTTGATCGTGTGGGGCGAGCAGCGTGAGCAAGCG ATTGCCCGTTTGCGCTATGCCTTGCAGCATTTCGAGGTTGCTGGCGTTACCACTAACATCCCATTGTTGCAAGCGATTAT CAACACGCCAGCCTACCAAGCCGGAGCCACAACCACCGATTTTCTGCAAACCTATGCAATTAGCGAGCAATTGCAACATC GTCAGTTGCCACCTAATTTGGCTTTGGCAGCCAGAGCGTTGTTTGATTTAGAGCCTGATCCTGATGCAGCATTAGTTGGC GACCCTTGGAATGTGCCATGGCGGGCGGCCCACATGCCGCATCAACTACGCTATCAAAGCAACGATCAAACCGTGCCGAT CAAGGCGCAGCCGCAAGCGCCTCAAGCATGGCTGGTAACGATCAACGACGAGCAACTTGAGATTGTGGTTTTGCGTCGCC ATCTCAATCGCATGGTTGTGCGGGTTGCCGATCGAATTTATCAATGCCAACTTGAGCAGGATAGCCTCGTTTGGCAAGGC GTTGGCTATCAGATTCAGCCTGCTGCCGCCCCCAGCCTTGACCAAAATAATGGTCACAAAGGCGATGCGAGCCTTGAAGC GCCCATGCCAGGCACAATTATCAAACTGCTAGTAGCCGAAGGCGAGCATGTTAGTGCAGGCCAGCCATTGCTGATTATGG AAGCCATGAAGATGGAGCACACTGTGACCGCGCCCTACGCTGGCACTGTTGCCAAACTGCCCTACCGCCAAGGCCAACAA GTCAGCGGCGGGGTAGCGCTGGCCGAAATTACCGCTGAGTAA
Upstream 100 bases:
>100_bases GCTGTATAATGGTAGCAACCACTGATCAACGCTATCAATGGCTGCATTTGTCGTAAATGATGCAAGCATTCGCCTGCATC GCTAGTGCGGAGTGTCAACG
Downstream 100 bases:
>100_bases CTATCGCCACAGTAACAGCAAGGGATTGATAAGCATTTAAGTTTATCGATCCCTTATATTTTTAAGCTTGATAATTGGTT TATCTCCGTTATACTGTAAT
Product: carbamoyl-phosphate synthase L chain ATP-binding
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 653; Mature: 652
Protein sequence:
>653_residues MTYFDSLLIANRGEIAVRVIRACRSLGIEAIAVYSDADARALHVREADRAIRIGPAAAAQSYLNIEAVLAAAQQTGAQAI HPGYGFLSENANFARACQSAGIAFIGPPAEAIEAMGSKSAAKRLAESVGVPTVPGYNGDDQSEQRLLAEAERIGFPLLIK ASAGGGGKGMRSVHRLAEFSAALAAAQREALAAFGDQHVLLEKLIERPRHIEFQILGDQHGTMLHLGERECSIQRRHQKV LEESPSIALTPALRATMGAAAVRLAQAVNYYNAGTQEFMLDANGEFYFLEMNTRLQVEHPVTELVTGLDLVQLQIAIAAG QRLPFAQADIQQTGHAIEVRLYAEDPVQMLPSIGQLSSYTPPEGPGIRLDTGVTVGDHVTINYDPMLAKLIVWGEQREQA IARLRYALQHFEVAGVTTNIPLLQAIINTPAYQAGATTTDFLQTYAISEQLQHRQLPPNLALAARALFDLEPDPDAALVG DPWNVPWRAAHMPHQLRYQSNDQTVPIKAQPQAPQAWLVTINDEQLEIVVLRRHLNRMVVRVADRIYQCQLEQDSLVWQG VGYQIQPAAAPSLDQNNGHKGDASLEAPMPGTIIKLLVAEGEHVSAGQPLLIMEAMKMEHTVTAPYAGTVAKLPYRQGQQ VSGGVALAEITAE
Sequences:
>Translated_653_residues MTYFDSLLIANRGEIAVRVIRACRSLGIEAIAVYSDADARALHVREADRAIRIGPAAAAQSYLNIEAVLAAAQQTGAQAI HPGYGFLSENANFARACQSAGIAFIGPPAEAIEAMGSKSAAKRLAESVGVPTVPGYNGDDQSEQRLLAEAERIGFPLLIK ASAGGGGKGMRSVHRLAEFSAALAAAQREALAAFGDQHVLLEKLIERPRHIEFQILGDQHGTMLHLGERECSIQRRHQKV LEESPSIALTPALRATMGAAAVRLAQAVNYYNAGTQEFMLDANGEFYFLEMNTRLQVEHPVTELVTGLDLVQLQIAIAAG QRLPFAQADIQQTGHAIEVRLYAEDPVQMLPSIGQLSSYTPPEGPGIRLDTGVTVGDHVTINYDPMLAKLIVWGEQREQA IARLRYALQHFEVAGVTTNIPLLQAIINTPAYQAGATTTDFLQTYAISEQLQHRQLPPNLALAARALFDLEPDPDAALVG DPWNVPWRAAHMPHQLRYQSNDQTVPIKAQPQAPQAWLVTINDEQLEIVVLRRHLNRMVVRVADRIYQCQLEQDSLVWQG VGYQIQPAAAPSLDQNNGHKGDASLEAPMPGTIIKLLVAEGEHVSAGQPLLIMEAMKMEHTVTAPYAGTVAKLPYRQGQQ VSGGVALAEITAE >Mature_652_residues TYFDSLLIANRGEIAVRVIRACRSLGIEAIAVYSDADARALHVREADRAIRIGPAAAAQSYLNIEAVLAAAQQTGAQAIH PGYGFLSENANFARACQSAGIAFIGPPAEAIEAMGSKSAAKRLAESVGVPTVPGYNGDDQSEQRLLAEAERIGFPLLIKA SAGGGGKGMRSVHRLAEFSAALAAAQREALAAFGDQHVLLEKLIERPRHIEFQILGDQHGTMLHLGERECSIQRRHQKVL EESPSIALTPALRATMGAAAVRLAQAVNYYNAGTQEFMLDANGEFYFLEMNTRLQVEHPVTELVTGLDLVQLQIAIAAGQ RLPFAQADIQQTGHAIEVRLYAEDPVQMLPSIGQLSSYTPPEGPGIRLDTGVTVGDHVTINYDPMLAKLIVWGEQREQAI ARLRYALQHFEVAGVTTNIPLLQAIINTPAYQAGATTTDFLQTYAISEQLQHRQLPPNLALAARALFDLEPDPDAALVGD PWNVPWRAAHMPHQLRYQSNDQTVPIKAQPQAPQAWLVTINDEQLEIVVLRRHLNRMVVRVADRIYQCQLEQDSLVWQGV GYQIQPAAAPSLDQNNGHKGDASLEAPMPGTIIKLLVAEGEHVSAGQPLLIMEAMKMEHTVTAPYAGTVAKLPYRQGQQV SGGVALAEITAE
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=683, Percent_Identity=41.5812591508053, Blast_Score=520, Evalue=1e-147, Organism=Homo sapiens, GI295821183, Length=656, Percent_Identity=41.3109756097561, Blast_Score=460, Evalue=1e-129, Organism=Homo sapiens, GI65506442, Length=442, Percent_Identity=51.5837104072398, Blast_Score=452, Evalue=1e-127, Organism=Homo sapiens, GI189095269, Length=445, Percent_Identity=51.2359550561798, Blast_Score=452, Evalue=1e-127, Organism=Homo sapiens, GI106049528, Length=443, Percent_Identity=46.0496613995485, Blast_Score=380, Evalue=1e-105, Organism=Homo sapiens, GI106049295, Length=443, Percent_Identity=46.0496613995485, Blast_Score=380, Evalue=1e-105, Organism=Homo sapiens, GI106049292, Length=443, Percent_Identity=46.0496613995485, Blast_Score=380, Evalue=1e-105, Organism=Homo sapiens, GI38679974, Length=718, Percent_Identity=28.4122562674095, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI38679971, Length=718, Percent_Identity=28.4122562674095, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI38679977, Length=718, Percent_Identity=28.4122562674095, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI38679967, Length=718, Percent_Identity=28.4122562674095, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI38679960, Length=718, Percent_Identity=28.4122562674095, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI134142062, Length=725, Percent_Identity=28.1379310344828, Blast_Score=242, Evalue=1e-63, Organism=Escherichia coli, GI1789654, Length=443, Percent_Identity=48.7584650112867, Blast_Score=416, Evalue=1e-117, Organism=Caenorhabditis elegans, GI71987519, Length=665, Percent_Identity=41.6541353383459, Blast_Score=502, Evalue=1e-142, Organism=Caenorhabditis elegans, GI17567343, Length=675, Percent_Identity=39.7037037037037, Blast_Score=459, Evalue=1e-129, Organism=Caenorhabditis elegans, GI17562816, Length=472, Percent_Identity=43.2203389830509, Blast_Score=360, Evalue=2e-99, Organism=Caenorhabditis elegans, GI133931226, Length=683, Percent_Identity=25.9150805270864, Blast_Score=209, Evalue=4e-54, Organism=Caenorhabditis elegans, GI71997168, Length=646, Percent_Identity=26.625386996904, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71997163, Length=663, Percent_Identity=26.0935143288084, Blast_Score=194, Evalue=9e-50, Organism=Saccharomyces cerevisiae, GI6319685, Length=444, Percent_Identity=44.8198198198198, Blast_Score=384, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6319695, Length=446, Percent_Identity=40.8071748878924, Blast_Score=323, Evalue=7e-89, Organism=Saccharomyces cerevisiae, GI6321376, Length=447, Percent_Identity=40.9395973154362, Blast_Score=316, Evalue=8e-87, Organism=Saccharomyces cerevisiae, GI6323863, Length=694, Percent_Identity=28.3861671469741, Blast_Score=239, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6324343, Length=541, Percent_Identity=31.4232902033272, Blast_Score=222, Evalue=1e-58, Organism=Drosophila melanogaster, GI24651757, Length=678, Percent_Identity=41.4454277286136, Blast_Score=482, Evalue=1e-136, Organism=Drosophila melanogaster, GI24651759, Length=643, Percent_Identity=40.5909797822706, Blast_Score=436, Evalue=1e-122, Organism=Drosophila melanogaster, GI24652212, Length=468, Percent_Identity=43.5897435897436, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652210, Length=468, Percent_Identity=43.5897435897436, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652214, Length=468, Percent_Identity=43.5897435897436, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI19921944, Length=468, Percent_Identity=43.5897435897436, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652216, Length=468, Percent_Identity=43.5897435897436, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI281363050, Length=468, Percent_Identity=43.5897435897436, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652224, Length=468, Percent_Identity=43.5897435897436, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652222, Length=468, Percent_Identity=43.5897435897436, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652220, Length=468, Percent_Identity=43.5897435897436, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652218, Length=468, Percent_Identity=43.5897435897436, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI161076407, Length=701, Percent_Identity=28.1027104136947, Blast_Score=248, Evalue=1e-65, Organism=Drosophila melanogaster, GI24586460, Length=701, Percent_Identity=28.1027104136947, Blast_Score=248, Evalue=1e-65, Organism=Drosophila melanogaster, GI161076409, Length=701, Percent_Identity=28.1027104136947, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI24586458, Length=701, Percent_Identity=28.1027104136947, Blast_Score=247, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 70815; Mature: 70683
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYFDSLLIANRGEIAVRVIRACRSLGIEAIAVYSDADARALHVREADRAIRIGPAAAAQ CCHHHCEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEEECCHHHHH SYLNIEAVLAAAQQTGAQAIHPGYGFLSENANFARACQSAGIAFIGPPAEAIEAMGSKSA HHHHHHHHHHHHHHCCCCEECCCCCEECCCCHHHHHHHHCCEEEECCCHHHHHHHCCHHH AKRLAESVGVPTVPGYNGDDQSEQRLLAEAERIGFPLLIKASAGGGGKGMRSVHRLAEFS HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH AALAAAQREALAAFGDQHVLLEKLIERPRHIEFQILGDQHGTMLHLGERECSIQRRHQKV HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCEEEECCHHHHHHHHHHHH LEESPSIALTPALRATMGAAAVRLAQAVNYYNAGTQEFMLDANGEFYFLEMNTRLQVEHP HHCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCEEEECCC VTELVTGLDLVQLQIAIAAGQRLPFAQADIQQTGHAIEVRLYAEDPVQMLPSIGQLSSYT HHHHHCCCHHHEEEEEECCCCCCCCHHHHHHHCCCEEEEEEEECCHHHHCCCHHHHCCCC PPEGPGIRLDTGVTVGDHVTINYDPMLAKLIVWGEQREQAIARLRYALQHFEVAGVTTNI CCCCCCEEEECCCEECCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCH PLLQAIINTPAYQAGATTTDFLQTYAISEQLQHRQLPPNLALAARALFDLEPDPDAALVG HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEC DPWNVPWRAAHMPHQLRYQSNDQTVPIKAQPQAPQAWLVTINDEQLEIVVLRRHLNRMVV CCCCCCEECCCCCHHEEECCCCCEEEEECCCCCCCEEEEEECCCCEEHHHHHHHHHHHHH RVADRIYQCQLEQDSLVWQGVGYQIQPAAAPSLDQNNGHKGDASLEAPMPGTIIKLLVAE HHHHHHHEEECCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEHCC GEHVSAGQPLLIMEAMKMEHTVTAPYAGTVAKLPYRQGQQVSGGVALAEITAE CCCCCCCCCEEEHHHHHHCCEECCCCCCCCEECCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure TYFDSLLIANRGEIAVRVIRACRSLGIEAIAVYSDADARALHVREADRAIRIGPAAAAQ CHHHCEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEEECCHHHHH SYLNIEAVLAAAQQTGAQAIHPGYGFLSENANFARACQSAGIAFIGPPAEAIEAMGSKSA HHHHHHHHHHHHHHCCCCEECCCCCEECCCCHHHHHHHHCCEEEECCCHHHHHHHCCHHH AKRLAESVGVPTVPGYNGDDQSEQRLLAEAERIGFPLLIKASAGGGGKGMRSVHRLAEFS HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH AALAAAQREALAAFGDQHVLLEKLIERPRHIEFQILGDQHGTMLHLGERECSIQRRHQKV HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCCCCEEEECCHHHHHHHHHHHH LEESPSIALTPALRATMGAAAVRLAQAVNYYNAGTQEFMLDANGEFYFLEMNTRLQVEHP HHCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCEEEECCC VTELVTGLDLVQLQIAIAAGQRLPFAQADIQQTGHAIEVRLYAEDPVQMLPSIGQLSSYT HHHHHCCCHHHEEEEEECCCCCCCCHHHHHHHCCCEEEEEEEECCHHHHCCCHHHHCCCC PPEGPGIRLDTGVTVGDHVTINYDPMLAKLIVWGEQREQAIARLRYALQHFEVAGVTTNI CCCCCCEEEECCCEECCEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCH PLLQAIINTPAYQAGATTTDFLQTYAISEQLQHRQLPPNLALAARALFDLEPDPDAALVG HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEC DPWNVPWRAAHMPHQLRYQSNDQTVPIKAQPQAPQAWLVTINDEQLEIVVLRRHLNRMVV CCCCCCEECCCCCHHEEECCCCCEEEEECCCCCCCEEEEEECCCCEEHHHHHHHHHHHHH RVADRIYQCQLEQDSLVWQGVGYQIQPAAAPSLDQNNGHKGDASLEAPMPGTIIKLLVAE HHHHHHHEEECCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEHCC GEHVSAGQPLLIMEAMKMEHTVTAPYAGTVAKLPYRQGQQVSGGVALAEITAE CCCCCCCCCEEEHHHHHHCCEECCCCCCCCEECCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]